BLASTX nr result

ID: Papaver22_contig00023219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00023219
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [...   199   7e-49
emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera]   199   7e-49
ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like i...   199   1e-48
ref|XP_002318930.1| global transcription factor group [Populus t...   198   1e-48
ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncat...   198   2e-48

>ref|XP_002280582.1| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1083

 Score =  199 bits (507), Expect = 7e-49
 Identities = 120/264 (45%), Positives = 163/264 (61%), Gaps = 16/264 (6%)
 Frame = -2

Query: 985  NGFRFSNYSVPFQMDVMYDNVKHAFFQDGDEQVAPFLHLHLHNPVMLGTEMTKDIQFRM- 809
            NGFR+S      ++D+MY N+KHAFFQ  + ++   +H HLHN +M+GT+ TKD+QF + 
Sbjct: 701  NGFRYSTSRPDERVDIMYGNIKHAFFQPVENEMITLIHFHLHNHIMVGTKKTKDVQFYVE 760

Query: 808  ----VQTSEGSGRKEPLALDSDKLGKKQQ----KTGDNLLMQKFVWAVDFLWRPLGSIQF 653
                VQT  GSG++   A D D++ ++Q+    K   N+  Q FV  V+ LW   G  QF
Sbjct: 761  VMDVVQTL-GSGKRS--AYDPDEIEEEQRERDRKNKVNMDFQSFVNRVNDLW---GQPQF 814

Query: 652  HELEMS-------LRFHAGIPVKNGTSLSSFLFMTLYCLVHLREEPFLIVPLKEIEVVNL 494
              L++        L FH G+P K+    S+F+  T  CLV L E PFL++ L EIE+VNL
Sbjct: 815  SGLDLEFDQPLRELGFH-GVPYKS----SAFIVPTSSCLVELIETPFLVITLAEIEIVNL 869

Query: 493  VQIQSPPEVFNMTIVFKDFKREVLKFYSIPSTYLVLIKEWLDIRDVKYYENKYELDILGW 314
             ++    + F+MTIVFKDFKR+VL+  SIPST +  IKEWLD  D+KYYE++  L+   W
Sbjct: 870  ERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSIDGIKEWLDTTDIKYYESRLNLN---W 926

Query: 313  GAKLKMIMDDPTDFIQGGGWEFLN 242
               LK I DDP  FI  GGWEFLN
Sbjct: 927  RQILKTITDDPQSFIDDGGWEFLN 950


>emb|CAN64798.1| hypothetical protein VITISV_017317 [Vitis vinifera]
          Length = 1083

 Score =  199 bits (507), Expect = 7e-49
 Identities = 120/264 (45%), Positives = 163/264 (61%), Gaps = 16/264 (6%)
 Frame = -2

Query: 985  NGFRFSNYSVPFQMDVMYDNVKHAFFQDGDEQVAPFLHLHLHNPVMLGTEMTKDIQFRM- 809
            NGFR+S      ++D+MY N+KHAFFQ  + ++   +H HLHN +M+GT+ TKD+QF + 
Sbjct: 701  NGFRYSTSRPDERVDIMYGNIKHAFFQPVENEMITLIHFHLHNHIMVGTKKTKDVQFYVE 760

Query: 808  ----VQTSEGSGRKEPLALDSDKLGKKQQ----KTGDNLLMQKFVWAVDFLWRPLGSIQF 653
                VQT  GSG++   A D D++ ++Q+    K   N+  Q FV  V+ LW   G  QF
Sbjct: 761  VMDVVQTL-GSGKRS--AYDPDEIEEEQRERDRKNKVNMDFQSFVNRVNDLW---GQPQF 814

Query: 652  HELEMS-------LRFHAGIPVKNGTSLSSFLFMTLYCLVHLREEPFLIVPLKEIEVVNL 494
              L++        L FH G+P K+    S+F+  T  CLV L E PFL++ L EIE+VNL
Sbjct: 815  SGLDLEFDQPLRELGFH-GVPYKS----SAFIVPTSSCLVELIETPFLVITLAEIEIVNL 869

Query: 493  VQIQSPPEVFNMTIVFKDFKREVLKFYSIPSTYLVLIKEWLDIRDVKYYENKYELDILGW 314
             ++    + F+MTIVFKDFKR+VL+  SIPST +  IKEWLD  D+KYYE++  L+   W
Sbjct: 870  ERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSIDGIKEWLDTTDIKYYESRLNLN---W 926

Query: 313  GAKLKMIMDDPTDFIQGGGWEFLN 242
               LK I DDP  FI  GGWEFLN
Sbjct: 927  RQILKTITDDPQSFIDDGGWEFLN 950


>ref|XP_003538372.1| PREDICTED: FACT complex subunit SPT16-like isoform 1 [Glycine max]
            gi|356539783|ref|XP_003538373.1| PREDICTED: FACT complex
            subunit SPT16-like isoform 2 [Glycine max]
          Length = 1069

 Score =  199 bits (505), Expect = 1e-48
 Identities = 121/264 (45%), Positives = 163/264 (61%), Gaps = 16/264 (6%)
 Frame = -2

Query: 985  NGFRFSNYSVPFQMDVMYDNVKHAFFQDGDEQVAPFLHLHLHNPVMLGTEMTKDIQFR-- 812
            NGFR+S      ++D+M+ N+KHAFFQ  + ++   LH HLHN +M+G + TKD+QF   
Sbjct: 705  NGFRYSTTRQDERVDIMFPNIKHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVE 764

Query: 811  ---MVQTSEGSGRKEPLALDSDKLGK----KQQKTGDNLLMQKFVWAVDFLWRPLGSIQF 653
               MVQ + GSG++   A D D+L +    +Q+K   N+  Q FV  V+ LW   G  QF
Sbjct: 765  VMDMVQ-NVGSGKRS--AYDPDELEEEQRERQRKNKINVEFQTFVNRVNDLW---GQPQF 818

Query: 652  HELEMS-------LRFHAGIPVKNGTSLSSFLFMTLYCLVHLREEPFLIVPLKEIEVVNL 494
            + L++        L F  G+P K+    S F+  T  CLV L E PFL+V L EIE+VNL
Sbjct: 819  NGLDLEFDQPLRELGF-PGVPHKS----SVFIVPTSACLVELIETPFLVVTLSEIEIVNL 873

Query: 493  VQIQSPPEVFNMTIVFKDFKREVLKFYSIPSTYLVLIKEWLDIRDVKYYENKYELDILGW 314
             ++    + F+MT+VFKDFKR+VL+  SIPST L  IKEWLD  D+KYYE++  L+   W
Sbjct: 874  ERVGLGQKNFDMTVVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNLN---W 930

Query: 313  GAKLKMIMDDPTDFIQGGGWEFLN 242
               LK I DDP  FI+GGGWEFLN
Sbjct: 931  RQILKTITDDPQSFIEGGGWEFLN 954


>ref|XP_002318930.1| global transcription factor group [Populus trichocarpa]
            gi|222857306|gb|EEE94853.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1082

 Score =  198 bits (504), Expect = 1e-48
 Identities = 120/261 (45%), Positives = 161/261 (61%), Gaps = 13/261 (4%)
 Frame = -2

Query: 985  NGFRFSNYSVPFQMDVMYDNVKHAFFQDGDEQVAPFLHLHLHNPVMLGTEMTKDIQFRM- 809
            NGFRFS      ++D+M+ N+KHAFFQ  ++++   LH HLHN +M+G + TKD+QF + 
Sbjct: 702  NGFRFSTSRSEERVDIMFSNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVE 761

Query: 808  ----VQTSEGSGRKEPLALDSDKLGKKQQ----KTGDNLLMQKFVWAVDFLW-RPLGS-- 662
                VQT  G  R    A D D++ ++Q+    K   N+  Q FV  V+ LW +P  S  
Sbjct: 762  VMDVVQTLGGGKRS---AYDPDEIEEEQRERDRKNKINMDFQSFVNRVNDLWSQPQFSGL 818

Query: 661  -IQFHELEMSLRFHAGIPVKNGTSLSSFLFMTLYCLVHLREEPFLIVPLKEIEVVNLVQI 485
             ++F +    L FH G+P K    ++SF+  T  CLV L E PFL+V L EIE+VNL ++
Sbjct: 819  DLEFDQPLRELGFH-GVPHK----VTSFIVPTSSCLVELVETPFLVVTLGEIEIVNLERV 873

Query: 484  QSPPEVFNMTIVFKDFKREVLKFYSIPSTYLVLIKEWLDIRDVKYYENKYELDILGWGAK 305
                + F+MTIVFKDFKR+VL+  SIPST L  IKEWLD  D+KYYE++  L+   W   
Sbjct: 874  GLGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNLN---WRQI 930

Query: 304  LKMIMDDPTDFIQGGGWEFLN 242
            LK I DDP  FI  GGWEFLN
Sbjct: 931  LKTITDDPQSFIDDGGWEFLN 951


>ref|XP_003600629.1| FACT complex subunit SPT16 [Medicago truncatula]
            gi|355489677|gb|AES70880.1| FACT complex subunit SPT16
            [Medicago truncatula]
          Length = 1066

 Score =  198 bits (503), Expect = 2e-48
 Identities = 122/264 (46%), Positives = 159/264 (60%), Gaps = 16/264 (6%)
 Frame = -2

Query: 985  NGFRFSNYSVPFQMDVMYDNVKHAFFQDGDEQVAPFLHLHLHNPVMLGTEMTKDIQFR-- 812
            NGFR+S      ++DVM+ N+KHAFFQ  + ++   LH HLHN +M+G + TKD+QF   
Sbjct: 704  NGFRYSTTRSDERVDVMFANIKHAFFQPAENEMITLLHFHLHNHIMVGNKKTKDVQFYVE 763

Query: 811  ---MVQTSEGSGRKEPLALDSDKLGKKQQ----KTGDNLLMQKFVWAVDFLWRPLGSIQF 653
               MVQ   G  R    A D D+L ++Q+    K   N+  Q FV  V+ LW   G  QF
Sbjct: 764  VMDMVQNVGGGKRS---AYDPDELEEEQRERERKNKINVEFQSFVNRVNDLW---GQPQF 817

Query: 652  HELEMS-------LRFHAGIPVKNGTSLSSFLFMTLYCLVHLREEPFLIVPLKEIEVVNL 494
            + L++        L F  G+P K+    S F+  T  CLV L E PFL+V L EIE+VNL
Sbjct: 818  NGLDLEFDQPLRELGF-PGVPHKS----SVFIVPTSACLVELIETPFLVVTLSEIEIVNL 872

Query: 493  VQIQSPPEVFNMTIVFKDFKREVLKFYSIPSTYLVLIKEWLDIRDVKYYENKYELDILGW 314
             ++    + F+MTIVFKDFKR+VL+  SIPST L  IKEWLD  D+KYYE++  L+   W
Sbjct: 873  ERVGLGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESRLNLN---W 929

Query: 313  GAKLKMIMDDPTDFIQGGGWEFLN 242
               LK I DDP  FI+GGGWEFLN
Sbjct: 930  RQILKTITDDPQSFIEGGGWEFLN 953


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