BLASTX nr result

ID: Papaver22_contig00022808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00022808
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II tra...   265   4e-69
ref|XP_002321780.1| predicted protein [Populus trichocarpa] gi|2...   258   6e-67
ref|XP_003556072.1| PREDICTED: mediator of RNA polymerase II tra...   257   1e-66
ref|XP_002339509.1| predicted protein [Populus trichocarpa] gi|2...   254   5e-66
ref|XP_004166615.1| PREDICTED: mediator of RNA polymerase II tra...   253   1e-65

>ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
           [Vitis vinifera] gi|297737389|emb|CBI26590.3| unnamed
           protein product [Vitis vinifera]
          Length = 198

 Score =  265 bits (677), Expect = 4e-69
 Identities = 120/139 (86%), Positives = 130/139 (93%)
 Frame = +2

Query: 152 MTSDKESNDGALTSPRPGNVYKDPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEA 331
           M S KES+  A T   P NVYKDPDDGRQRFLLELEF+QCLANPTYIHYLAQNRYFEDEA
Sbjct: 1   MDSGKESDSAADTPTSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEA 60

Query: 332 FIGYLKYLKYWQQPEYLKFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWKN 511
           FIGYLKYL+YWQQPEY+KFIMYPHCL+FLELLQNANFRNAMAHPG+KELAHRQQFF+WKN
Sbjct: 61  FIGYLKYLQYWQQPEYIKFIMYPHCLFFLELLQNANFRNAMAHPGSKELAHRQQFFYWKN 120

Query: 512 YRNNRLKHIVPRPLPEPVA 568
           YRNNRLKHI+P+PLPEP+A
Sbjct: 121 YRNNRLKHILPKPLPEPLA 139


>ref|XP_002321780.1| predicted protein [Populus trichocarpa] gi|222868776|gb|EEF05907.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score =  258 bits (658), Expect = 6e-67
 Identities = 115/124 (92%), Positives = 120/124 (96%)
 Frame = +2

Query: 197 RPGNVYKDPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLKYWQQPE 376
           RP  +YKDPDDGRQRFLLELEF+QCLANPTYIHYLAQNRYFEDEAFIGYLKYL YWQ+PE
Sbjct: 5   RPKKIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLLYWQRPE 64

Query: 377 YLKFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWKNYRNNRLKHIVPRPLP 556
           Y+KFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWKNYRNNRLKHI+PRPLP
Sbjct: 65  YMKFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWKNYRNNRLKHILPRPLP 124

Query: 557 EPVA 568
           EP A
Sbjct: 125 EPAA 128


>ref|XP_003556072.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           31-like [Glycine max]
          Length = 206

 Score =  257 bits (656), Expect = 1e-66
 Identities = 118/141 (83%), Positives = 127/141 (90%), Gaps = 1/141 (0%)
 Frame = +2

Query: 152 MTSDKESNDGALTSPR-PGNVYKDPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDE 328
           M S  ES +   TSP  P N+YKDPDDG+QRFLLELEF+QCLANPTYIHYLAQNRYFEDE
Sbjct: 1   MASKIESENSTDTSPSSPKNIYKDPDDGQQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 60

Query: 329 AFIGYLKYLKYWQQPEYLKFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWK 508
           AFIGYLKYL+YWQ+PEY+KFIMYPHCLYFLELLQNANFRNAMAHP NKELAHRQQF+FWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELAHRQQFYFWK 120

Query: 509 NYRNNRLKHIVPRPLPEPVAP 571
           NYRNNRLKHI+PR LPEP  P
Sbjct: 121 NYRNNRLKHILPRSLPEPATP 141


>ref|XP_002339509.1| predicted protein [Populus trichocarpa] gi|222832585|gb|EEE71062.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  254 bits (650), Expect = 5e-66
 Identities = 113/122 (92%), Positives = 120/122 (98%)
 Frame = +2

Query: 200 PGNVYKDPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLKYWQQPEY 379
           P  +YKDPDDGRQRFLLELEF+QCLANPTYIHYLAQNRYFEDEAFIGYLKYL+YWQ+PE+
Sbjct: 1   PKKIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEH 60

Query: 380 LKFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWKNYRNNRLKHIVPRPLPE 559
           +KFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWKNYRNNRLKHI+PRPLPE
Sbjct: 61  VKFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWKNYRNNRLKHILPRPLPE 120

Query: 560 PV 565
           PV
Sbjct: 121 PV 122


>ref|XP_004166615.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           31-like [Cucumis sativus]
          Length = 206

 Score =  253 bits (647), Expect = 1e-65
 Identities = 112/123 (91%), Positives = 120/123 (97%)
 Frame = +2

Query: 200 PGNVYKDPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLKYWQQPEY 379
           P NVYKDPDDGRQRFLLELEF+QCLANPTYIHYLAQNRY EDEAFIGYLKYL+YWQ+PEY
Sbjct: 18  PTNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQRPEY 77

Query: 380 LKFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWKNYRNNRLKHIVPRPLPE 559
           +KFIMYPHCL+FLELLQN+NFRNAMAHPGNKELAHRQQF+FWKNYRNNRLKHI+PRPLPE
Sbjct: 78  IKFIMYPHCLFFLELLQNSNFRNAMAHPGNKELAHRQQFYFWKNYRNNRLKHILPRPLPE 137

Query: 560 PVA 568
           P A
Sbjct: 138 PAA 140


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