BLASTX nr result
ID: Papaver22_contig00022112
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00022112
(411 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004149752.1| PREDICTED: nucleoporin seh1-like [Cucumis sa... 57 4e-20
gb|AAG51710.1|AC066689_9 unknown protein; 62092-56687 [Arabidops... 60 1e-19
gb|AAG59882.1|AF325901_1 seh1-like protein [Arabidopsis thaliana] 60 1e-19
ref|NP_564830.1| transducin/WD-40 repeat-containing protein [Ara... 60 1e-19
gb|AAM65032.1| seh1-like protein [Arabidopsis thaliana] 60 1e-19
>ref|XP_004149752.1| PREDICTED: nucleoporin seh1-like [Cucumis sativus]
gi|449505051|ref|XP_004162362.1| PREDICTED: nucleoporin
seh1-like [Cucumis sativus]
Length = 326
Score = 57.4 bits (137), Expect(3) = 4e-20
Identities = 29/49 (59%), Positives = 37/49 (75%)
Frame = +3
Query: 129 DAQIVQRKLCKLFETNHEIQFLDIQFGISSRSLKLVVAYSDRQVKVYEL 275
DAQ +Q KLCKLF++N Q LD+QFG SS LK++ A+SD +KVYEL
Sbjct: 93 DAQPLQWKLCKLFKSNSS-QILDLQFGNSSSGLKMIAAFSDGYIKVYEL 140
Score = 55.1 bits (131), Expect(3) = 4e-20
Identities = 26/40 (65%), Positives = 29/40 (72%)
Frame = +1
Query: 292 LELQKWQLRAEFQNVVDSASAFEKPSWLSASISWNQQRGE 411
L L+ WQL+AEFQNV+DS S K S SASISWN RGE
Sbjct: 144 LNLKNWQLQAEFQNVIDSISTVRKSSCSSASISWNPHRGE 183
Score = 30.4 bits (67), Expect(3) = 4e-20
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 2 ACVCGDGTVSLREEVSEERNGKSNPSRW 85
AC+C DGT SL EEV E+ + P +W
Sbjct: 76 ACICSDGTSSLWEEVVED----AQPLQW 99
>gb|AAG51710.1|AC066689_9 unknown protein; 62092-56687 [Arabidopsis thaliana]
Length = 594
Score = 60.1 bits (144), Expect(3) = 1e-19
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 292 LELQKWQLRAEFQNVVDSASAFEKPSWLSASISWNQQRGE 411
LEL+ WQL+AEFQNV+DS S KPS LSAS+SWN +GE
Sbjct: 142 LELKNWQLQAEFQNVIDSLSTLGKPSSLSASVSWNPMKGE 181
Score = 50.1 bits (118), Expect(3) = 1e-19
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +3
Query: 129 DAQIVQRKLCKLFETNHEIQFLDIQFGISSRSLKLVVAYSDRQVKVYELNGHLD 290
DA ++ KLCK + N Q LD+QFG+S +SLK+V AYSD ++V+EL L+
Sbjct: 91 DAHGLEWKLCKSMK-NKSSQVLDVQFGVSRKSLKMVAAYSDGYLRVFELLNPLE 143
Score = 31.2 bits (69), Expect(3) = 1e-19
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +2
Query: 2 ACVCGDGTVSLREEVSEERNG 64
ACVC DG++S+ EE+SE+ +G
Sbjct: 74 ACVCEDGSLSIWEELSEDAHG 94
>gb|AAG59882.1|AF325901_1 seh1-like protein [Arabidopsis thaliana]
Length = 326
Score = 60.1 bits (144), Expect(3) = 1e-19
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 292 LELQKWQLRAEFQNVVDSASAFEKPSWLSASISWNQQRGE 411
LEL+ WQL+AEFQNV+DS S KPS LSAS+SWN +GE
Sbjct: 142 LELKNWQLQAEFQNVIDSLSTLGKPSSLSASVSWNPMKGE 181
Score = 50.1 bits (118), Expect(3) = 1e-19
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +3
Query: 129 DAQIVQRKLCKLFETNHEIQFLDIQFGISSRSLKLVVAYSDRQVKVYELNGHLD 290
DA ++ KLCK + N Q LD+QFG+S +SLK+V AYSD ++V+EL L+
Sbjct: 91 DAHGLEWKLCKSMK-NKSSQVLDVQFGVSRKSLKMVAAYSDGYLRVFELLNPLE 143
Score = 31.2 bits (69), Expect(3) = 1e-19
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +2
Query: 2 ACVCGDGTVSLREEVSEERNG 64
ACVC DG++S+ EE+SE+ +G
Sbjct: 74 ACVCEDGSLSIWEELSEDAHG 94
>ref|NP_564830.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
gi|13877919|gb|AAK44037.1|AF370222_1 unknown protein
[Arabidopsis thaliana] gi|16323456|gb|AAL15222.1|
unknown protein [Arabidopsis thaliana]
gi|332196108|gb|AEE34229.1| transducin/WD-40
repeat-containing protein [Arabidopsis thaliana]
Length = 326
Score = 60.1 bits (144), Expect(3) = 1e-19
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 292 LELQKWQLRAEFQNVVDSASAFEKPSWLSASISWNQQRGE 411
LEL+ WQL+AEFQNV+DS S KPS LSAS+SWN +GE
Sbjct: 142 LELKNWQLQAEFQNVIDSLSTLGKPSSLSASVSWNPMKGE 181
Score = 50.1 bits (118), Expect(3) = 1e-19
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +3
Query: 129 DAQIVQRKLCKLFETNHEIQFLDIQFGISSRSLKLVVAYSDRQVKVYELNGHLD 290
DA ++ KLCK + N Q LD+QFG+S +SLK+V AYSD ++V+EL L+
Sbjct: 91 DAHGLEWKLCKSMK-NKSSQVLDVQFGVSRKSLKMVAAYSDGYLRVFELLNPLE 143
Score = 31.2 bits (69), Expect(3) = 1e-19
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +2
Query: 2 ACVCGDGTVSLREEVSEERNG 64
ACVC DG++S+ EE+SE+ +G
Sbjct: 74 ACVCEDGSLSIWEELSEDAHG 94
>gb|AAM65032.1| seh1-like protein [Arabidopsis thaliana]
Length = 326
Score = 60.1 bits (144), Expect(3) = 1e-19
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 292 LELQKWQLRAEFQNVVDSASAFEKPSWLSASISWNQQRGE 411
LEL+ WQL+AEFQNV+DS S KPS LSAS+SWN +GE
Sbjct: 142 LELKNWQLQAEFQNVIDSLSTLGKPSSLSASVSWNPMKGE 181
Score = 50.1 bits (118), Expect(3) = 1e-19
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +3
Query: 129 DAQIVQRKLCKLFETNHEIQFLDIQFGISSRSLKLVVAYSDRQVKVYELNGHLD 290
DA ++ KLCK + N Q LD+QFG+S +SLK+V AYSD ++V+EL L+
Sbjct: 91 DAHGLEWKLCKSMK-NKSSQVLDVQFGVSRKSLKMVAAYSDGYLRVFELLNPLE 143
Score = 31.2 bits (69), Expect(3) = 1e-19
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +2
Query: 2 ACVCGDGTVSLREEVSEERNG 64
ACVC DG++S+ EE+SE+ +G
Sbjct: 74 ACVCEDGSLSIWEELSEDAHG 94