BLASTX nr result

ID: Papaver22_contig00020355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00020355
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001169412.1| hypothetical protein [Zea mays] gi|224029193...    56   4e-06
ref|XP_003614689.1| F-box/kelch-repeat protein [Medicago truncat...    55   7e-06

>ref|NP_001169412.1| hypothetical protein [Zea mays] gi|224029193|gb|ACN33672.1| unknown
           [Zea mays] gi|414885214|tpg|DAA61228.1| TPA:
           hypothetical protein ZEAMMB73_142511 [Zea mays]
           gi|414885215|tpg|DAA61229.1| TPA: hypothetical protein
           ZEAMMB73_142511 [Zea mays] gi|414885216|tpg|DAA61230.1|
           TPA: hypothetical protein ZEAMMB73_142511 [Zea mays]
          Length = 370

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 7/174 (4%)
 Frame = +2

Query: 2   KLWYNTIFNDKRFATIHLSQNQNKFTLFF----NLLNCSPKMAPNAEAAYFFSLESKKDH 169
           K W + +  D  F   HLS+ Q K  LF     N  + +  +A N  + Y  S  +    
Sbjct: 41  KSWMS-VLTDPHFIHEHLSRGQQKLLLFATDRGNDRSLAMVLADNNASMYQLSRPAASRS 99

Query: 170 VLDFNRRNILHFQHKNEPVGYCNGLTCVKIASQHVGTSGAISVINPTRGETLVINY-LNP 346
           V          F H +     CNGL C+        ++GA+ V+NPT GE+L++   +  
Sbjct: 100 V----------FVHNS-----CNGLLCLG------DSTGAVEVLNPTTGESLMLPMPMYT 138

Query: 347 CGEGSGYNPLCHGFGFDSLSHEYKLVLIFTSRTNDGFL--CMVFTLGTNSWRKI 502
            G     +   H  GF     E+K+V  +    ND F   C ++T+G   WR++
Sbjct: 139 AGSSQFSSCNWHCLGFCPQKREHKVVHFYPGAHNDPFKVHCEIYTIGVGVWRQV 192


>ref|XP_003614689.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355516024|gb|AES97647.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 518

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
 Frame = +2

Query: 8   WYNTIFNDKRFATIHLSQNQNKFTLFFNLLNCSPKMAPNAEAAYFFSLESKKDHVLDFNR 187
           W+N++ +D +FA  H   +    T   ++L  S         +Y  +    KD   +   
Sbjct: 72  WWNSLISDPKFAKKHFRFST---TCLIHILTYSSLSHKYIIKSYPLNSLFTKDVAYNKIA 128

Query: 188 RNILHFQHKNEPVGYCNGLTCVKIASQHVGTSGAISVI-NPTRGETLVINYLNPCGEGSG 364
           ++ +   H    VG CNG+ CV  A  H+    AI  + NP+  +   +  L    + +G
Sbjct: 129 QHEIASSHCVYNVGSCNGIICV--AEYHIYERFAIYRLWNPSIRKFKELPPLEL--QHAG 184

Query: 365 YNPLCHGFGFDSLSHEYKLVLIFTSRTNDGFLCMVFTLGTNSWRKI 502
           YN   HGFG D +S  YK+V++F    N   + +V  +GTN W+ I
Sbjct: 185 YNFQMHGFGHDPISDNYKVVVVFRD-NNKTDVKVVHNVGTNFWKDI 229


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