BLASTX nr result

ID: Papaver22_contig00019450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00019450
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|2...   246   4e-63
ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri...   246   5e-63
gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]      245   8e-63
ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   242   7e-62
emb|CBI33876.3| unnamed protein product [Vitis vinifera]              241   2e-61

>ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|222833851|gb|EEE72328.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  246 bits (628), Expect = 4e-63
 Identities = 132/240 (55%), Positives = 163/240 (67%), Gaps = 19/240 (7%)
 Frame = +3

Query: 96  FQFAPSTPKTSLKSSISN-FPLIS--------------SKKFRFQLYSVVEKITVQXXXX 230
           F  +P +P  SL   ISN  PLIS              SK   FQL S V+++TV+    
Sbjct: 24  FFLSPKSPPLSLNLHISNPTPLISHNFPQPSLTQNHPRSKSLCFQLCSTVQEVTVEITPE 83

Query: 231 XXXXXXXXXXXXXYVVNIPWTVSVADMKSLFGECGTVTDVEIIKQRDGRNRGFAFITMST 410
                        +VVN+PW+ SV D+K LFG+CGTV+DVEIIKQ++GR+RGFAF+TM+T
Sbjct: 84  EEEIQEANLKRKLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQKNGRSRGFAFVTMTT 143

Query: 411 GEEARAVIDKFNEYEISGRVIRVEFSKRLKKXXXXXXXG----LGVKETRHLLYVSNLAW 578
           GEEA+A IDKFN  E+SGR+IRVEF+KRL++       G    +   ETRH LY+SNLAW
Sbjct: 144 GEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKLYISNLAW 203

Query: 579 KARASHLRELFSTCSSPVSARAVFDSPSGRSAGYGFVSFATREEAESALSALDGKELMGR 758
           K R SHLRE FST  +PVS+R VFD P+GRS+GYGFVSFATREEA +A+SA  GKELMGR
Sbjct: 204 KVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKELMGR 263


>ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223532973|gb|EEF34739.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 278

 Score =  246 bits (627), Expect = 5e-63
 Identities = 124/216 (57%), Positives = 161/216 (74%)
 Frame = +3

Query: 111 STPKTSLKSSISNFPLISSKKFRFQLYSVVEKITVQXXXXXXXXXXXXXXXXXYVVNIPW 290
           S P  S   S+SN  L +++K  F+ +S  ++I +                  YV N+PW
Sbjct: 39  SIPLLSHNFSLSNIHL-TARKLSFERFSTAQEIMIPEETQETTQKRKL-----YVFNLPW 92

Query: 291 TVSVADMKSLFGECGTVTDVEIIKQRDGRNRGFAFITMSTGEEARAVIDKFNEYEISGRV 470
           ++SV D+K+LFG+CGTVTDVEIIKQ++GR+RGFAF+T+++GEEA+A IDK + +E+SGR+
Sbjct: 93  SLSVVDIKNLFGQCGTVTDVEIIKQKNGRSRGFAFVTLASGEEAQAAIDKLDSHEVSGRI 152

Query: 471 IRVEFSKRLKKXXXXXXXGLGVKETRHLLYVSNLAWKARASHLRELFSTCSSPVSARAVF 650
           IRVEF+KRLK        G   +ETRH +YVSNLAWK R++HLRE FST  SPVS+R VF
Sbjct: 153 IRVEFAKRLKPPSPPSPTGTSARETRHKIYVSNLAWKVRSTHLREFFSTNFSPVSSRVVF 212

Query: 651 DSPSGRSAGYGFVSFATREEAESALSALDGKELMGR 758
           DSP+GRS+GYGFVSFATREEAE+A+SALDGKELMGR
Sbjct: 213 DSPTGRSSGYGFVSFATREEAEAAISALDGKELMGR 248


>gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 294

 Score =  245 bits (625), Expect = 8e-63
 Identities = 131/240 (54%), Positives = 163/240 (67%), Gaps = 19/240 (7%)
 Frame = +3

Query: 96  FQFAPSTPKTSLKSSISN-FPLIS--------------SKKFRFQLYSVVEKITVQXXXX 230
           F  +P +P  SL   ISN  PLIS              SK   FQL S V+++T++    
Sbjct: 24  FFLSPKSPPLSLNLHISNPTPLISHNFPQPSLTQNHPRSKSLCFQLCSTVQEVTMEITPE 83

Query: 231 XXXXXXXXXXXXXYVVNIPWTVSVADMKSLFGECGTVTDVEIIKQRDGRNRGFAFITMST 410
                        +VVN+PW+ SV D+K LFG+CGTV+DVEIIKQ++GR+RGFAF+TM+T
Sbjct: 84  EEEIQEANLKRKLFVVNLPWSFSVVDIKDLFGQCGTVSDVEIIKQKNGRSRGFAFVTMTT 143

Query: 411 GEEARAVIDKFNEYEISGRVIRVEFSKRLKKXXXXXXXG----LGVKETRHLLYVSNLAW 578
           GEEA+A IDKFN  E+SGR+IRVEF+KRL++       G    +   ETRH LY+SNLAW
Sbjct: 144 GEEAQAAIDKFNSLEVSGRIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKLYISNLAW 203

Query: 579 KARASHLRELFSTCSSPVSARAVFDSPSGRSAGYGFVSFATREEAESALSALDGKELMGR 758
           K R SHLRE FST  +PVS+R VFD P+GRS+GYGFVSFATREEA +A+SA  GKELMGR
Sbjct: 204 KVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKELMGR 263


>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
           vinifera]
          Length = 288

 Score =  242 bits (617), Expect = 7e-62
 Identities = 129/237 (54%), Positives = 165/237 (69%), Gaps = 6/237 (2%)
 Frame = +3

Query: 66  FSKPSSLSVNFQFAPSTPKTSLKSSISNFPLISSK---KFRFQLYSVVEKITVQXXXXXX 236
           FS     S++   +   P   LK  +   PL+ +    KF F+L S V++I V+      
Sbjct: 23  FSHRPPPSMSLHSSAFIPSICLKYPLYPLPLLYTNPTTKFSFELCSSVQEIEVEAKPEQT 82

Query: 237 XXXXXXXXXXXYVVNIPWTVSVADMKSLFGECGTVTDVEIIKQRDGRNRGFAFITMSTGE 416
                      +V+N+PW++SV D+K+LFGECGTVTDVEIIKQ+DGR+RG+AF+TM +GE
Sbjct: 83  QEPNQKRKL--FVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGE 140

Query: 417 EARAVIDKFNEYEISGRVIRVEFSKRLKK---XXXXXXXGLGVKETRHLLYVSNLAWKAR 587
           EA+AV++KF+ YE+SGR+IRVEF+KR KK          G    ETRH LYVSNLAWK R
Sbjct: 141 EAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVR 200

Query: 588 ASHLRELFSTCSSPVSARAVFDSPSGRSAGYGFVSFATREEAESALSALDGKELMGR 758
           ++HLRE FS+  +PVS R VFDSPSGRS GYGF SFAT+EEAE+A+SALDGKELMGR
Sbjct: 201 STHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGR 257


>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  241 bits (614), Expect = 2e-61
 Identities = 126/220 (57%), Positives = 159/220 (72%), Gaps = 6/220 (2%)
 Frame = +3

Query: 117 PKTSLKSSISNFPLISSK---KFRFQLYSVVEKITVQXXXXXXXXXXXXXXXXXYVVNIP 287
           P   LK  +   PL+ +    KF F+L S V++I V+                 +V+N+P
Sbjct: 10  PSICLKYPLYPLPLLYTNPTTKFSFELCSSVQEIEVEAKPEQTQEPNQKRKL--FVLNLP 67

Query: 288 WTVSVADMKSLFGECGTVTDVEIIKQRDGRNRGFAFITMSTGEEARAVIDKFNEYEISGR 467
           W++SV D+K+LFGECGTVTDVEIIKQ+DGR+RG+AF+TM +GEEA+AV++KF+ YE+SGR
Sbjct: 68  WSLSVVDIKNLFGECGTVTDVEIIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGR 127

Query: 468 VIRVEFSKRLKK---XXXXXXXGLGVKETRHLLYVSNLAWKARASHLRELFSTCSSPVSA 638
           +IRVEF+KR KK          G    ETRH LYVSNLAWK R++HLRE FS+  +PVS 
Sbjct: 128 IIRVEFAKRFKKPSPPPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSV 187

Query: 639 RAVFDSPSGRSAGYGFVSFATREEAESALSALDGKELMGR 758
           R VFDSPSGRS GYGF SFAT+EEAE+A+SALDGKELMGR
Sbjct: 188 RVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGR 227


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