BLASTX nr result

ID: Papaver22_contig00019360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00019360
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...   120   3e-25
ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protei...   117   2e-24
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...   117   2e-24
ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protei...   117   2e-24
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   116   6e-24

>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score =  120 bits (301), Expect = 3e-25
 Identities = 57/72 (79%), Positives = 64/72 (88%)
 Frame = +2

Query: 32   HRKVLKTRDLIIVSIGCRRYQITPIYAIEDNNGRHRMLRYTHEHMHFLAMFRGPLAPPNT 211
            H+KVLKTRD IIVS+G RRYQ TPIYAIED+NGRHRML+YT EHMH LAMF GPLAPPNT
Sbjct: 827  HKKVLKTRDPIIVSVGWRRYQTTPIYAIEDSNGRHRMLKYTPEHMHCLAMFWGPLAPPNT 886

Query: 212  AVVAIQSMANGQ 247
             VVAIQ+++N Q
Sbjct: 887  GVVAIQNLSNNQ 898



 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 45/66 (68%), Positives = 54/66 (81%)
 Frame = +3

Query: 576  QAVFRLHLYFVCILLEFNHAANIVKKIKLIGFPCKIFKKYAFVKDMLTSNFEIARFEGAA 755
            QA FR+      ++LEFNHAA IVKKIKL+G+PCKIFKK A +KDM TS+ E+ARFEGAA
Sbjct: 898  QATFRITA--TAVVLEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAA 955

Query: 756  VRTVSG 773
            +RTVSG
Sbjct: 956  IRTVSG 961


>ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507882|gb|AES89024.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 988

 Score =  117 bits (294), Expect = 2e-24
 Identities = 54/72 (75%), Positives = 63/72 (87%)
 Frame = +2

Query: 32   HRKVLKTRDLIIVSIGCRRYQITPIYAIEDNNGRHRMLRYTHEHMHFLAMFRGPLAPPNT 211
            H+KVLKTRD IIVS+G RRYQ TP+YAIED NGRHRML+YT EHMH LAMF GPLAPPNT
Sbjct: 823  HKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWGPLAPPNT 882

Query: 212  AVVAIQSMANGQ 247
             +VA+Q+++N Q
Sbjct: 883  GIVAVQTLSNNQ 894



 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 44/66 (66%), Positives = 54/66 (81%)
 Frame = +3

Query: 576  QAVFRLHLYFVCILLEFNHAANIVKKIKLIGFPCKIFKKYAFVKDMLTSNFEIARFEGAA 755
            QA FR+      +++EFNHAA IVKKIKL+G+PCKIFKK A +KDM TS+ E+ARFEGAA
Sbjct: 894  QATFRITA--TAVVVEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAA 951

Query: 756  VRTVSG 773
            +RTVSG
Sbjct: 952  IRTVSG 957


>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score =  117 bits (294), Expect = 2e-24
 Identities = 54/72 (75%), Positives = 63/72 (87%)
 Frame = +2

Query: 32   HRKVLKTRDLIIVSIGCRRYQITPIYAIEDNNGRHRMLRYTHEHMHFLAMFRGPLAPPNT 211
            H+KVLKTRD IIVS+G RRYQ TP+YAIED NGRHRML+YT EHMH LAMF GPLAPPNT
Sbjct: 823  HKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWGPLAPPNT 882

Query: 212  AVVAIQSMANGQ 247
             +VA+Q+++N Q
Sbjct: 883  GIVAVQTLSNNQ 894



 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 44/66 (66%), Positives = 54/66 (81%)
 Frame = +3

Query: 576  QAVFRLHLYFVCILLEFNHAANIVKKIKLIGFPCKIFKKYAFVKDMLTSNFEIARFEGAA 755
            QA FR+      +++EFNHAA IVKKIKL+G+PCKIFKK A +KDM TS+ E+ARFEGAA
Sbjct: 894  QATFRITA--TAVVVEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAA 951

Query: 756  VRTVSG 773
            +RTVSG
Sbjct: 952  IRTVSG 957


>ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507880|gb|AES89022.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1200

 Score =  117 bits (294), Expect = 2e-24
 Identities = 54/72 (75%), Positives = 63/72 (87%)
 Frame = +2

Query: 32   HRKVLKTRDLIIVSIGCRRYQITPIYAIEDNNGRHRMLRYTHEHMHFLAMFRGPLAPPNT 211
            H+KVLKTRD IIVS+G RRYQ TP+YAIED NGRHRML+YT EHMH LAMF GPLAPPNT
Sbjct: 823  HKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWGPLAPPNT 882

Query: 212  AVVAIQSMANGQ 247
             +VA+Q+++N Q
Sbjct: 883  GIVAVQTLSNNQ 894



 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 44/66 (66%), Positives = 54/66 (81%)
 Frame = +3

Query: 576  QAVFRLHLYFVCILLEFNHAANIVKKIKLIGFPCKIFKKYAFVKDMLTSNFEIARFEGAA 755
            QA FR+      +++EFNHAA IVKKIKL+G+PCKIFKK A +KDM TS+ E+ARFEGAA
Sbjct: 894  QATFRITA--TAVVVEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAA 951

Query: 756  VRTVSG 773
            +RTVSG
Sbjct: 952  IRTVSG 957


>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
            predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  116 bits (290), Expect = 6e-24
 Identities = 54/72 (75%), Positives = 61/72 (84%)
 Frame = +2

Query: 32   HRKVLKTRDLIIVSIGCRRYQITPIYAIEDNNGRHRMLRYTHEHMHFLAMFRGPLAPPNT 211
            HRKVLKT+D +I SIG RRYQ TP+YAIED NGRHRML+YT EHMH LA F GPLAPPNT
Sbjct: 829  HRKVLKTKDPVIFSIGWRRYQTTPVYAIEDRNGRHRMLKYTPEHMHCLATFWGPLAPPNT 888

Query: 212  AVVAIQSMANGQ 247
             VVA+Q++AN Q
Sbjct: 889  GVVAVQNLANNQ 900



 Score = 85.9 bits (211), Expect = 9e-15
 Identities = 42/66 (63%), Positives = 52/66 (78%)
 Frame = +3

Query: 576  QAVFRLHLYFVCILLEFNHAANIVKKIKLIGFPCKIFKKYAFVKDMLTSNFEIARFEGAA 755
            QA FR+      ++LEFNHAA +VKK+KL+G PCKIFKK A + +M TS+ E+ARFEGAA
Sbjct: 900  QASFRITA--TAVVLEFNHAAKMVKKVKLVGHPCKIFKKTALIMNMFTSDLEVARFEGAA 957

Query: 756  VRTVSG 773
            VRTVSG
Sbjct: 958  VRTVSG 963


Top