BLASTX nr result

ID: Papaver22_contig00018993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00018993
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW70820.1| putative RNA helicase family protein [Zea mays]        231   2e-58
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   231   2e-58
ref|XP_002468351.1| hypothetical protein SORBIDRAFT_01g044300 [S...   231   2e-58
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   231   2e-58
gb|ACN34981.1| unknown [Zea mays]                                     231   2e-58

>gb|AFW70820.1| putative RNA helicase family protein [Zea mays]
          Length = 1236

 Score =  231 bits (588), Expect = 2e-58
 Identities = 114/150 (76%), Positives = 132/150 (88%), Gaps = 3/150 (2%)
 Frame = +3

Query: 3    RSLRRAQDVRRQLITILDRYNLVIGSAGKNFTKIRKAIAAGFFFHAAKMDPQEGGYRTIL 182
            RSLRRAQDVR+QL+TI+DRY L + SAGKNFTKIRKAI AGFFFHAA+ DPQEG YRT++
Sbjct: 1088 RSLRRAQDVRKQLLTIMDRYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEG-YRTLV 1146

Query: 183  ENQPVYIHPSSALFQRQPNWVIYHELVMTSKEYMREITVIDPKWLIEFAPRSFKATDTSK 362
            ENQPVYIHPSSALFQRQP+WVIYHELVMT+KEYMRE+TVIDPKWL+E APR +K  D +K
Sbjct: 1147 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFYKGADPTK 1206

Query: 363  MTKQKRKERIMPL---HHEPDSRCLRKRRA 443
            M+K+KR+ERI PL   +HEP+S  L KRRA
Sbjct: 1207 MSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1236


>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  231 bits (588), Expect = 2e-58
 Identities = 114/150 (76%), Positives = 132/150 (88%), Gaps = 3/150 (2%)
 Frame = +3

Query: 3    RSLRRAQDVRRQLITILDRYNLVIGSAGKNFTKIRKAIAAGFFFHAAKMDPQEGGYRTIL 182
            RSLRRAQDVR+QL+TI+D+Y L + SAGKNFTKIRKAI AGFFFHAA+ DPQEG YRT++
Sbjct: 1024 RSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEG-YRTLV 1082

Query: 183  ENQPVYIHPSSALFQRQPNWVIYHELVMTSKEYMREITVIDPKWLIEFAPRSFKATDTSK 362
            ENQPVYIHPSSALFQRQP+WVIYHELVMT+KEYMRE+TVIDPKWL+E APR FK  D +K
Sbjct: 1083 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTK 1142

Query: 363  MTKQKRKERIMPL---HHEPDSRCLRKRRA 443
            M+K+KR+ERI PL   +HEP+S  L KRRA
Sbjct: 1143 MSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1172


>ref|XP_002468351.1| hypothetical protein SORBIDRAFT_01g044300 [Sorghum bicolor]
            gi|241922205|gb|EER95349.1| hypothetical protein
            SORBIDRAFT_01g044300 [Sorghum bicolor]
          Length = 1242

 Score =  231 bits (588), Expect = 2e-58
 Identities = 114/150 (76%), Positives = 132/150 (88%), Gaps = 3/150 (2%)
 Frame = +3

Query: 3    RSLRRAQDVRRQLITILDRYNLVIGSAGKNFTKIRKAIAAGFFFHAAKMDPQEGGYRTIL 182
            RSLRRAQDVR+QL+TI+DRY L + SAGKNFTKIRKAI AGFFFHAA+ DPQEG YRT++
Sbjct: 1094 RSLRRAQDVRKQLLTIMDRYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEG-YRTLV 1152

Query: 183  ENQPVYIHPSSALFQRQPNWVIYHELVMTSKEYMREITVIDPKWLIEFAPRSFKATDTSK 362
            ENQPVYIHPSSALFQRQP+WVIYHELVMT+KEYMRE+TVIDPKWL+E APR +K  D +K
Sbjct: 1153 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFYKGADPTK 1212

Query: 363  MTKQKRKERIMPL---HHEPDSRCLRKRRA 443
            M+K+KR+ERI PL   +HEP+S  L KRRA
Sbjct: 1213 MSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1242


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  231 bits (588), Expect = 2e-58
 Identities = 114/150 (76%), Positives = 132/150 (88%), Gaps = 3/150 (2%)
 Frame = +3

Query: 3    RSLRRAQDVRRQLITILDRYNLVIGSAGKNFTKIRKAIAAGFFFHAAKMDPQEGGYRTIL 182
            RSLRRAQDVR+QL+TI+D+Y L + SAGKNFTKIRKAI AGFFFHAA+ DPQEG YRT++
Sbjct: 1027 RSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEG-YRTLV 1085

Query: 183  ENQPVYIHPSSALFQRQPNWVIYHELVMTSKEYMREITVIDPKWLIEFAPRSFKATDTSK 362
            ENQPVYIHPSSALFQRQP+WVIYHELVMT+KEYMRE+TVIDPKWL+E APR FK  D +K
Sbjct: 1086 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTK 1145

Query: 363  MTKQKRKERIMPL---HHEPDSRCLRKRRA 443
            M+K+KR+ERI PL   +HEP+S  L KRRA
Sbjct: 1146 MSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1175


>gb|ACN34981.1| unknown [Zea mays]
          Length = 422

 Score =  231 bits (588), Expect = 2e-58
 Identities = 114/150 (76%), Positives = 132/150 (88%), Gaps = 3/150 (2%)
 Frame = +3

Query: 3   RSLRRAQDVRRQLITILDRYNLVIGSAGKNFTKIRKAIAAGFFFHAAKMDPQEGGYRTIL 182
           RSLRRAQDVR+QL+TI+DRY L + SAGKNFTKIRKAI AGFFFHAA+ DPQEG YRT++
Sbjct: 274 RSLRRAQDVRKQLLTIMDRYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEG-YRTLV 332

Query: 183 ENQPVYIHPSSALFQRQPNWVIYHELVMTSKEYMREITVIDPKWLIEFAPRSFKATDTSK 362
           ENQPVYIHPSSALFQRQP+WVIYHELVMT+KEYMRE+TVIDPKWL+E APR +K  D +K
Sbjct: 333 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFYKGADPTK 392

Query: 363 MTKQKRKERIMPL---HHEPDSRCLRKRRA 443
           M+K+KR+ERI PL   +HEP+S  L KRRA
Sbjct: 393 MSKRKRQERIEPLYDRYHEPNSWRLSKRRA 422


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