BLASTX nr result

ID: Papaver22_contig00018890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00018890
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    67   1e-09
ref|XP_003618781.1| F-box/kelch-repeat protein [Medicago truncat...    61   1e-07
dbj|BAH20429.1| AT3G06240 [Arabidopsis thaliana]                       60   2e-07
gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thal...    60   2e-07
ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thalian...    60   2e-07

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 11/129 (8%)
 Frame = +2

Query: 98  RPAGFLSVSFPRYIS------FEYGFGYDAL--DYKYVRI--MGRSSVTQGKSEVDVYSL 247
           R   FL +   RY        + +GFGYD++  DYK VRI   G       +SEV VYSL
Sbjct: 126 RVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSL 185

Query: 248 KSDTWKRIQHIISNGRSVSAPRVFYNGALHCIV-KSYSGNRRKVLISLDVGNESVQEIPE 424
           +  +W+RI  +        A  VF NGALH +V ++   N   ++++LD+G E  +E+ +
Sbjct: 186 RKQSWRRIGDMPYCVHYPGANGVFANGALHWVVGENPESNVANIVVALDLGVEDYREVLQ 245

Query: 425 PENLGDGNF 451
           PE   D NF
Sbjct: 246 PE-YKDKNF 253


>ref|XP_003618781.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355493796|gb|AES74999.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
 Frame = +2

Query: 149 YGFGYDAL--DYKYVRI---MGRSSVTQGKSEVDVYSLKSDTWKRIQHIISNGRSVSAPR 313
           Y  GYD+   +YK + +      +S    K++V V++L S+ W+RI    S  + V   R
Sbjct: 167 YSVGYDSFTDNYKVIVVACYQHYNSYKFCKTQVKVHTLGSNVWRRIPDFPSENKGVPEGR 226

Query: 314 V--FYNGALHCIVKSYSGNRRKVLISLDVGNESVQEIPEPE 430
           V  F +GA+H ++K    +   V++SLD+GNES QEI +P+
Sbjct: 227 VGKFVSGAIHWVIKDQDNDSSWVILSLDLGNESYQEILQPD 267


>dbj|BAH20429.1| AT3G06240 [Arabidopsis thaliana]
          Length = 241

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
 Frame = +2

Query: 116 SVSFPRYISFEYGFGYDAL--DYKYVRIMGRSSVTQGKSEVDVYSLKSDTWKRIQHI-IS 286
           SV + R     YGFG+D L  DYK V+++  S   +   +  VYSLK+D+W+RI ++   
Sbjct: 17  SVEYERDNFQTYGFGFDGLTDDYKLVKLVATS---EDILDASVYSLKADSWRRICNLNYE 73

Query: 287 NGRSVSAPRVFYNGALHCIVKSYSGNRRKVLISLDVGNESVQEIPEPENLGD 442
           +        V +NGA+H +      N+R V+++ D+  E  +E+P P+   D
Sbjct: 74  HNDGSYTSGVHFNGAIHWVFTESRHNQR-VVVAFDIQTEEFREMPVPDEAED 124


>gb|AAF30317.1|AC018907_17 hypothetical protein [Arabidopsis thaliana]
           gi|21536665|gb|AAM60997.1| unknown [Arabidopsis
           thaliana]
          Length = 416

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
 Frame = +2

Query: 116 SVSFPRYISFEYGFGYDAL--DYKYVRIMGRSSVTQGKSEVDVYSLKSDTWKRIQHI-IS 286
           SV + R     YGFG+D L  DYK V+++  S   +   +  VYSLK+D+W+RI ++   
Sbjct: 192 SVEYERDNFQTYGFGFDGLTDDYKLVKLVATS---EDILDASVYSLKADSWRRICNLNYE 248

Query: 287 NGRSVSAPRVFYNGALHCIVKSYSGNRRKVLISLDVGNESVQEIPEPENLGD 442
           +        V +NGA+H +      N+R V+++ D+  E  +E+P P+   D
Sbjct: 249 HNDGSYTSGVHFNGAIHWVFTESRHNQR-VVVAFDIQTEEFREMPVPDEAED 299


>ref|NP_566277.2| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|75151183|sp|Q8GXC7.1|FBK50_ARATH RecName:
           Full=F-box/kelch-repeat protein At3g06240
           gi|26451648|dbj|BAC42921.1| unknown protein [Arabidopsis
           thaliana] gi|29824145|gb|AAP04033.1| putative F-box
           protein family [Arabidopsis thaliana]
           gi|332640843|gb|AEE74364.1| F-box/kelch-repeat protein
           [Arabidopsis thaliana]
          Length = 427

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
 Frame = +2

Query: 116 SVSFPRYISFEYGFGYDAL--DYKYVRIMGRSSVTQGKSEVDVYSLKSDTWKRIQHI-IS 286
           SV + R     YGFG+D L  DYK V+++  S   +   +  VYSLK+D+W+RI ++   
Sbjct: 203 SVEYERDNFQTYGFGFDGLTDDYKLVKLVATS---EDILDASVYSLKADSWRRICNLNYE 259

Query: 287 NGRSVSAPRVFYNGALHCIVKSYSGNRRKVLISLDVGNESVQEIPEPENLGD 442
           +        V +NGA+H +      N+R V+++ D+  E  +E+P P+   D
Sbjct: 260 HNDGSYTSGVHFNGAIHWVFTESRHNQR-VVVAFDIQTEEFREMPVPDEAED 310


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