BLASTX nr result

ID: Papaver22_contig00018850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00018850
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311009.1| predicted protein [Populus trichocarpa] gi|2...   311   4e-83
ref|XP_002269817.1| PREDICTED: ribonuclease H2 subunit A isoform...   310   7e-83
ref|XP_004152096.1| PREDICTED: ribonuclease H2 subunit A-like [C...   304   5e-81
ref|XP_002515756.1| ribonuclease hi large subunit, putative [Ric...   304   7e-81
ref|NP_565584.1| Ribonuclease H2 subunit A [Arabidopsis thaliana...   303   1e-80

>ref|XP_002311009.1| predicted protein [Populus trichocarpa] gi|222850829|gb|EEE88376.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score =  311 bits (797), Expect = 4e-83
 Identities = 153/178 (85%), Positives = 164/178 (92%)
 Frame = +2

Query: 11  LPKWASEPCLMGIDEAGRGPVLGPMVYGCLYCPISYQNTLSTLSFADSKTLKEEKREELF 190
           LP WAS+PC+MGIDEAGRGPVLGPMVYGCLYC  SY+ TLSTL FADSKTLKEEKREELF
Sbjct: 7   LPDWASKPCIMGIDEAGRGPVLGPMVYGCLYCARSYEKTLSTLKFADSKTLKEEKREELF 66

Query: 191 ESLKIDESIGWLADVIDPRELSAKMLRKIKVNLNEISHNSAMGLVTAVLDLGVFLTEVYV 370
           E LK +E IGW  DVIDPRELSAKML+KIK+NLNEISH+SA GLVT VL++GV LT+VYV
Sbjct: 67  EKLKANELIGWAVDVIDPRELSAKMLKKIKINLNEISHDSASGLVTRVLNMGVLLTDVYV 126

Query: 371 DTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRDWVLDET 544
           DTVGDPEKYRIKLSERFP IKFVVAKKADSLYPVVSGASIVAKVTRDRA+RDWVLDET
Sbjct: 127 DTVGDPEKYRIKLSERFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALRDWVLDET 184


>ref|XP_002269817.1| PREDICTED: ribonuclease H2 subunit A isoform 1 [Vitis vinifera]
           gi|296086584|emb|CBI32219.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  310 bits (795), Expect = 7e-83
 Identities = 153/178 (85%), Positives = 165/178 (92%)
 Frame = +2

Query: 11  LPKWASEPCLMGIDEAGRGPVLGPMVYGCLYCPISYQNTLSTLSFADSKTLKEEKREELF 190
           LPKWASEPC+MGIDEAGRGPVLGPMVYGCLYC  SY NTLSTL+FADSKTLKEEKREELF
Sbjct: 7   LPKWASEPCMMGIDEAGRGPVLGPMVYGCLYCARSYHNTLSTLNFADSKTLKEEKREELF 66

Query: 191 ESLKIDESIGWLADVIDPRELSAKMLRKIKVNLNEISHNSAMGLVTAVLDLGVFLTEVYV 370
           E+LK DESIGW  DVIDP ELSAKML+K K+NLNEISH+SA+GL+T VL++GV LTEVYV
Sbjct: 67  ENLKADESIGWAVDVIDPWELSAKMLKKNKINLNEISHDSAIGLITRVLNMGVLLTEVYV 126

Query: 371 DTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRDWVLDET 544
           DTVGD EKYRIKLSERFP +KFVVAKKADSLYPVVSGASIVAKVTRDRA+RDWVL ET
Sbjct: 127 DTVGDAEKYRIKLSERFPAVKFVVAKKADSLYPVVSGASIVAKVTRDRALRDWVLVET 184


>ref|XP_004152096.1| PREDICTED: ribonuclease H2 subunit A-like [Cucumis sativus]
           gi|449529756|ref|XP_004171864.1| PREDICTED: ribonuclease
           H2 subunit A-like [Cucumis sativus]
          Length = 297

 Score =  304 bits (779), Expect = 5e-81
 Identities = 148/178 (83%), Positives = 162/178 (91%)
 Frame = +2

Query: 11  LPKWASEPCLMGIDEAGRGPVLGPMVYGCLYCPISYQNTLSTLSFADSKTLKEEKREELF 190
           LPKW S+PC+MGIDEAGRGPVLGPMVYGCLYC  SY   LS+L+FADSKTLKEEKREELF
Sbjct: 7   LPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKQLSSLNFADSKTLKEEKREELF 66

Query: 191 ESLKIDESIGWLADVIDPRELSAKMLRKIKVNLNEISHNSAMGLVTAVLDLGVFLTEVYV 370
           E LK +ESIGW  DVIDPRELS+KML K+K+NLNEISH+SAMGLVT VL +GV LTEVYV
Sbjct: 67  EDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLSMGVLLTEVYV 126

Query: 371 DTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRDWVLDET 544
           DTVGDPEKYRIKLSE+FP IKFVVAKKADSLYPVVSGASIVAKVTRDRA+R+W L+ET
Sbjct: 127 DTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEET 184


>ref|XP_002515756.1| ribonuclease hi large subunit, putative [Ricinus communis]
           gi|223545084|gb|EEF46595.1| ribonuclease hi large
           subunit, putative [Ricinus communis]
          Length = 299

 Score =  304 bits (778), Expect = 7e-81
 Identities = 149/178 (83%), Positives = 165/178 (92%)
 Frame = +2

Query: 11  LPKWASEPCLMGIDEAGRGPVLGPMVYGCLYCPISYQNTLSTLSFADSKTLKEEKREELF 190
           LPKWAS+PC+MGIDEAGRGPVLGPMVYGCLYC  SY+ TLSTLSFADSKTLKE+KREELF
Sbjct: 9   LPKWASKPCIMGIDEAGRGPVLGPMVYGCLYCARSYERTLSTLSFADSKTLKEDKREELF 68

Query: 191 ESLKIDESIGWLADVIDPRELSAKMLRKIKVNLNEISHNSAMGLVTAVLDLGVFLTEVYV 370
           E+LK +ESIGW  DVIDPRELSAKML+K K+NLNEISH SA+GL+T VL+ GV LT+VY+
Sbjct: 69  ENLKANESIGWAVDVIDPRELSAKMLQKNKINLNEISHESAIGLITRVLNEGVLLTQVYL 128

Query: 371 DTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRDWVLDET 544
           DTVGD EKYRIKLSERFP IKFVVAKKADSLYPVVSGASIVAKVTRDRA+R+WVL+ET
Sbjct: 129 DTVGDAEKYRIKLSERFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALRNWVLEET 186


>ref|NP_565584.1| Ribonuclease H2 subunit A [Arabidopsis thaliana]
           gi|49066054|sp|Q9SEZ6.2|RNH2A_ARATH RecName:
           Full=Ribonuclease H2 subunit A; Short=RNase H2 subunit
           A; AltName: Full=Ribonuclease HI large subunit;
           Short=RNase HI large subunit; AltName: Full=Ribonuclease
           HI subunit A gi|26450346|dbj|BAC42289.1| putative
           ribonuclease large subunit [Arabidopsis thaliana]
           gi|28973385|gb|AAO64017.1| putative ribonuclease large
           subunit [Arabidopsis thaliana]
           gi|330252563|gb|AEC07657.1| Ribonuclease H2 subunit A
           [Arabidopsis thaliana]
          Length = 296

 Score =  303 bits (776), Expect = 1e-80
 Identities = 142/177 (80%), Positives = 166/177 (93%)
 Frame = +2

Query: 14  PKWASEPCLMGIDEAGRGPVLGPMVYGCLYCPISYQNTLSTLSFADSKTLKEEKREELFE 193
           P+WAS+PCLMGIDEAGRGPVLGPMVYGC+YCPISYQ++L++L FADSKTLKEEKREEL+E
Sbjct: 8   PEWASQPCLMGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKEEKREELYE 67

Query: 194 SLKIDESIGWLADVIDPRELSAKMLRKIKVNLNEISHNSAMGLVTAVLDLGVFLTEVYVD 373
           SLK+D+S+GW  DVIDPRELSAKML K K NLNEISHNSAMGL+  VLD+GV LTE Y+D
Sbjct: 68  SLKLDKSLGWAVDVIDPRELSAKMLAKNKTNLNEISHNSAMGLIKRVLDMGVLLTEAYLD 127

Query: 374 TVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRDWVLDET 544
           TVGDP+KYRIKLSERFP IKFVV+KKADSL+P+VSGASIVAKVTRDRA+++W+++ET
Sbjct: 128 TVGDPDKYRIKLSERFPSIKFVVSKKADSLFPIVSGASIVAKVTRDRALKEWLVEET 184


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