BLASTX nr result

ID: Papaver22_contig00018493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00018493
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like [Gl...    64   2e-08
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri...    64   3e-08
ref|XP_004173655.1| PREDICTED: DNA repair helicase XPB1-like, pa...    63   5e-08
ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, pa...    63   5e-08
ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cu...    63   5e-08

>ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like [Glycine max]
          Length = 768

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/46 (65%), Positives = 36/46 (78%)
 Frame = +1

Query: 1   MSHMSGADGMAYMEFTKGKYPGQGHLKSNKPKDPTKRHSLFKKRFG 138
           MS MSGA GM YME++ G+  GQG +KS KPKDP KRH LFK+R+G
Sbjct: 722 MSAMSGAKGMVYMEYSTGRNKGQGQIKS-KPKDPAKRHFLFKRRYG 766


>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
           gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
           helicase, putative [Ricinus communis]
          Length = 768

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/48 (66%), Positives = 37/48 (77%), Gaps = 2/48 (4%)
 Frame = +1

Query: 1   MSHMSGADGMAYMEFTKG--KYPGQGHLKSNKPKDPTKRHSLFKKRFG 138
           MS MSGA GM YME++ G  K  GQGH+KS KPKDP KRH LFK+R+G
Sbjct: 722 MSAMSGAKGMVYMEYSTGRNKLAGQGHIKS-KPKDPAKRHYLFKRRYG 768


>ref|XP_004173655.1| PREDICTED: DNA repair helicase XPB1-like, partial [Cucumis sativus]
          Length = 78

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +1

Query: 1   MSHMSGADGMAYMEFTKG-KYPGQGHLKSNKPKDPTKRHSLFKKRF 135
           MS MSGA+GM YME++ G K  GQG LKS KPKDP KRH LFKKRF
Sbjct: 33  MSAMSGANGMVYMEYSTGRKLAGQGQLKS-KPKDPAKRHHLFKKRF 77


>ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, partial [Cucumis sativus]
          Length = 725

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +1

Query: 1   MSHMSGADGMAYMEFTKG-KYPGQGHLKSNKPKDPTKRHSLFKKRF 135
           MS MSGA+GM YME++ G K  GQG LKS KPKDP KRH LFKKRF
Sbjct: 680 MSAMSGANGMVYMEYSTGRKLAGQGQLKS-KPKDPAKRHHLFKKRF 724


>ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cucumis sativus]
          Length = 768

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +1

Query: 1   MSHMSGADGMAYMEFTKG-KYPGQGHLKSNKPKDPTKRHSLFKKRF 135
           MS MSGA+GM YME++ G K  GQG LKS KPKDP KRH LFKKRF
Sbjct: 723 MSAMSGANGMVYMEYSTGRKLAGQGQLKS-KPKDPAKRHHLFKKRF 767


Top