BLASTX nr result

ID: Papaver22_contig00018292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00018292
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]   210   3e-52
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...   208   1e-51
ref|XP_002315729.1| predicted protein [Populus trichocarpa] gi|2...   202   9e-50
ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron sp...   178   2e-42
ref|XP_002517017.1| conserved hypothetical protein [Ricinus comm...   174   3e-41

>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score =  210 bits (535), Expect = 3e-52
 Identities = 133/293 (45%), Positives = 168/293 (57%), Gaps = 22/293 (7%)
 Frame = +1

Query: 85  MSVVPSCQIYQT--SFLDSFQTTSLSRFSGYPLQFARYGXXXXXXXXXXXXTQNSISSNS 258
           M+++PS Q Y T  SFLDSF +T L        QF RYG            T+N+I+SNS
Sbjct: 1   MALLPSRQFYPTTTSFLDSFHSTRL--------QFFRYGSSNRFRTHSSYVTRNTIASNS 52

Query: 259 VPERNPPR-------NNSQKTASNGELSNNG------WNETHHSNTIKRPRGCXXXXXXX 399
               NP R       N       +G +S++G      WN  H  +    P+         
Sbjct: 53  T---NPQRKSNIVFTNTPVSQYDSGGVSSSGGNWIDKWNGPHQKS---HPKEXRPVMNYR 106

Query: 400 XXXXXXXXXXXXXXXXXXXKIVEKLKRFGYVDD---SSEREGRRVPERSSVEDIFYVEEG 570
                              KIVEKLK+FGY+DD   + E    R+ E+ S+EDIFY+EEG
Sbjct: 107 NSETVSRSDGGSGGGSTMEKIVEKLKKFGYMDDVKETKENVQERIIEKGSIEDIFYIEEG 166

Query: 571 T----RGGASSHTPLDVENYFGGNGDIRFPWEKPMIKEAEGNSVRSKSRTSLAELTLPES 738
                +GG S  +PL VEN   GNG++RFPWE+P ++E    SVR KSRTSLAELTLPES
Sbjct: 167 ILPNPQGGFSLDSPLGVENKGDGNGEVRFPWERPKVEEG---SVRIKSRTSLAELTLPES 223

Query: 739 ELRRLRNLAVKTKSRTKVGGAGVTQAVVEKIHEKWMSSEIVRLKCEGPPALNM 897
           ELRRLRNL ++TK++TK+GG GVTQAVV+ I EKW +SEIV+LKCEG  ALNM
Sbjct: 224 ELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNM 276


>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Vitis vinifera]
           gi|297737163|emb|CBI26364.3| unnamed protein product
           [Vitis vinifera]
          Length = 902

 Score =  208 bits (530), Expect = 1e-51
 Identities = 132/293 (45%), Positives = 167/293 (56%), Gaps = 22/293 (7%)
 Frame = +1

Query: 85  MSVVPSCQIYQT--SFLDSFQTTSLSRFSGYPLQFARYGXXXXXXXXXXXXTQNSISSNS 258
           M+++PS Q Y T  SFLDSF +T L        QF RYG             +N+I+SNS
Sbjct: 1   MALLPSRQFYPTTTSFLDSFHSTRL--------QFFRYGSSNRFRTHSSYVARNTIASNS 52

Query: 259 VPERNPPR-------NNSQKTASNGELSNNG------WNETHHSNTIKRPRGCXXXXXXX 399
               NP R       N       +G +S++G      WN  H  +    P+         
Sbjct: 53  T---NPQRKSNIVFTNTPVSQYDSGGVSSSGGNWIDKWNGPHQKS---HPKESRPVMNYR 106

Query: 400 XXXXXXXXXXXXXXXXXXXKIVEKLKRFGYVDD---SSEREGRRVPERSSVEDIFYVEEG 570
                              KIVEKLK+FGY+DD   + E    R+ E+ S+EDIFY+EEG
Sbjct: 107 NSETVSRSDGGSGGGSTMEKIVEKLKKFGYMDDVKETKENVQERIIEKGSIEDIFYIEEG 166

Query: 571 T----RGGASSHTPLDVENYFGGNGDIRFPWEKPMIKEAEGNSVRSKSRTSLAELTLPES 738
                +GG S  +PL VEN   GNG++RFPWE+P ++E    SVR KSRTSLAELTLPES
Sbjct: 167 ILPNPQGGFSLDSPLGVENKGDGNGEVRFPWERPKVEEG---SVRIKSRTSLAELTLPES 223

Query: 739 ELRRLRNLAVKTKSRTKVGGAGVTQAVVEKIHEKWMSSEIVRLKCEGPPALNM 897
           ELRRLRNL ++TK++TK+GG GVTQAVV+ I EKW +SEIV+LKCEG  ALNM
Sbjct: 224 ELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNM 276


>ref|XP_002315729.1| predicted protein [Populus trichocarpa] gi|222864769|gb|EEF01900.1|
           predicted protein [Populus trichocarpa]
          Length = 894

 Score =  202 bits (514), Expect = 9e-50
 Identities = 128/281 (45%), Positives = 161/281 (57%), Gaps = 10/281 (3%)
 Frame = +1

Query: 85  MSVVPSCQIYQTSFLDSFQTTSLSRFSGYPLQFARYGXXXXXXXXXXXXTQNSISSNSVP 264
           M++VPS Q+Y    +DSFQ+ S S+F G PLQF RY                +  + S  
Sbjct: 1   MALVPSRQLY----IDSFQS-SFSKFHGTPLQFFRYSSSFPLRSHSGYACSITDKNPSTK 55

Query: 265 ERNPPRNNSQK-TASNGELSNNGWNETHHSNTIKRPRGCXXXXXXXXXXXXXXXXXXXXX 441
             + P + S+    S G      WN+ +  N  + P+                       
Sbjct: 56  STSFPTDKSKTLNLSTGSSWFFNWNKPNKQNLPRTPQAVFDYRSNNSNSSGSGSTME--- 112

Query: 442 XXXXXKIVEKLKRFGYVD----DSSEREGRRVPERSSVEDIFYVEEG----TRGGASSHT 597
                KIVEKLK+ GY+D    ++ ER   RV E+ SVEDIFYVEEG     RGG S  +
Sbjct: 113 -----KIVEKLKKHGYMDGDVNENKERMQERVIEKGSVEDIFYVEEGMLPNARGGFSKES 167

Query: 598 PLDVENYFGGNGDIRFPWEKPMIKEAEGN-SVRSKSRTSLAELTLPESELRRLRNLAVKT 774
           PL VE+ F  +G++RFPWEKP  +E EG  + RSKSRTSLAELTLPESELRRLRNL   T
Sbjct: 168 PLGVEDVFRSDGEVRFPWEKPKKEEDEGKWTARSKSRTSLAELTLPESELRRLRNLTYGT 227

Query: 775 KSRTKVGGAGVTQAVVEKIHEKWMSSEIVRLKCEGPPALNM 897
           KS+T+VGG GVTQ VV+ IH+KW +SEI R+K EG PALNM
Sbjct: 228 KSKTRVGGRGVTQEVVDAIHDKWKTSEIARVKVEGAPALNM 268


>ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Cucumis sativus]
           gi|449504099|ref|XP_004162252.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Cucumis sativus]
          Length = 874

 Score =  178 bits (451), Expect = 2e-42
 Identities = 120/295 (40%), Positives = 151/295 (51%), Gaps = 24/295 (8%)
 Frame = +1

Query: 85  MSVVPSCQIYQTSFLDSFQTTSLSRFS----GYPLQFARYGXXXXXXXXXXXXTQNSISS 252
           M+++ S   + T+F D+FQT   S       G  + F                  N IS 
Sbjct: 1   MALLHSRLCHATNFFDTFQTEFHSSHILLKYGSSVVFRNRSFCSSFYGLTTDTFSNGISY 60

Query: 253 NSVPERNPP-RNNSQKTASNGELSNNGWNETHHSNTIKRPRGCXXXXXXXXXXXXXXXXX 429
            S+  R P  R N ++  S     +  WNET   N  K PR                   
Sbjct: 61  GSLSSRTPVYRYNLRRNLSRVSWIDR-WNETAKRNRPKPPRAVLDYPSSDENEVSISSTG 119

Query: 430 XXXXXXXXX-------------KIVEKLKRFGYVDDSSEREGR-RVPERSSVEDIFYVEE 567
                                 KIV KLK+FGY+DD ++ +G  R  E+ SVEDI Y+EE
Sbjct: 120 FSKSYRASSRIDDDGRGGSTMEKIVRKLKKFGYIDDENKEKGEERAIEKGSVEDILYIEE 179

Query: 568 G----TRGGASSHTPLDVENYFGGNGDIRFPWEKPMIKE-AEGNSVRSKSRTSLAELTLP 732
           G    TRGG S  +P+  EN FG +G++RFPWEKP  KE   G+S R +   SLA+LTLP
Sbjct: 180 GMLPNTRGGFSKESPMGDENMFGSDGEVRFPWEKPKEKEDTHGDSTR-RGSASLAQLTLP 238

Query: 733 ESELRRLRNLAVKTKSRTKVGGAGVTQAVVEKIHEKWMSSEIVRLKCEGPPALNM 897
           E ELRRLRNL  + + + K+GG GVTQAVV+ IHEKW SSEIVRLK  GPPALNM
Sbjct: 239 EPELRRLRNLTFQKRHKMKIGGGGVTQAVVDVIHEKWKSSEIVRLKILGPPALNM 293


>ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
           gi|223543652|gb|EEF45180.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 773

 Score =  174 bits (441), Expect = 3e-41
 Identities = 94/159 (59%), Positives = 115/159 (72%), Gaps = 12/159 (7%)
 Frame = +1

Query: 457 KIVEKLKRFGYVDDS-----SEREGRRVPERSSVEDIFYVEEG----TRGGASSHTPLDV 609
           KIVEKLK+ GY+D +      E+   RV ++ SVEDIFYVEEG    +RGG S  +PL V
Sbjct: 3   KIVEKLKKHGYIDGNVDEKKKEKTLERVIQKGSVEDIFYVEEGNLPNSRGGFSKESPLGV 62

Query: 610 ENYFGGNGDIRFPWEKPMIKEAEGN---SVRSKSRTSLAELTLPESELRRLRNLAVKTKS 780
           E+ F  NG++RFPWEKP  +E E     + RSKSRT LAELTLPESELRRLRNL  + KS
Sbjct: 63  EDVFKSNGEVRFPWEKPKREELEHEKKWTARSKSRTQLAELTLPESELRRLRNLTYQIKS 122

Query: 781 RTKVGGAGVTQAVVEKIHEKWMSSEIVRLKCEGPPALNM 897
           + +V GAGVTQ VV+ IH++W +SEIVR+K EG PALNM
Sbjct: 123 KVRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNM 161


Top