BLASTX nr result

ID: Papaver22_contig00018278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00018278
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II tra...   183   2e-44
ref|NP_001236135.1| uncharacterized protein LOC100306257 [Glycin...   182   3e-44
ref|NP_974205.1| uncharacterized protein [Arabidopsis thaliana] ...   182   3e-44
ref|XP_002269953.1| PREDICTED: uncharacterized protein LOC100255...   181   6e-44
ref|XP_002882182.1| hypothetical protein ARALYDRAFT_317046 [Arab...   180   1e-43

>ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           11-like [Cucumis sativus]
           gi|449504225|ref|XP_004162288.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 11-like [Cucumis
           sativus]
          Length = 118

 Score =  183 bits (464), Expect = 2e-44
 Identities = 86/115 (74%), Positives = 99/115 (86%)
 Frame = -1

Query: 478 MDSQGQNTSLQRLHHVEKRVVRVLELAGGVMDELSNPTGPRVEVVNNHCREFMQSIKDIQ 299
           MD    NTSLQRL +VEKR+VRVLELAGGVM+EL+NP GPR E VNNHC EFMQ IKDIQ
Sbjct: 1   MDPPAHNTSLQRLQNVEKRIVRVLELAGGVMEELANPAGPRKEFVNNHCSEFMQFIKDIQ 60

Query: 298 VTLREEIKSACEYRPFEKCDYSSRISNEICCKKLEYIMKQLDDMKQSIERYDSSV 134
           VTLR+EIKSACEYRPFEKCDYSSRI+NE+CCKKLEY++ +LD MKQ+I+ Y   +
Sbjct: 61  VTLRDEIKSACEYRPFEKCDYSSRITNELCCKKLEYMVSKLDGMKQTIDDYQVKI 115


>ref|NP_001236135.1| uncharacterized protein LOC100306257 [Glycine max]
           gi|255628025|gb|ACU14357.1| unknown [Glycine max]
          Length = 115

 Score =  182 bits (461), Expect = 3e-44
 Identities = 87/115 (75%), Positives = 101/115 (87%)
 Frame = -1

Query: 478 MDSQGQNTSLQRLHHVEKRVVRVLELAGGVMDELSNPTGPRVEVVNNHCREFMQSIKDIQ 299
           MDSQGQ TSLQRL +VEKR+V+VLELAGGVMDEL++P GPR +VV NHC EFMQ IKDIQ
Sbjct: 1   MDSQGQTTSLQRLQNVEKRIVKVLELAGGVMDELASPVGPRKDVVQNHCLEFMQLIKDIQ 60

Query: 298 VTLREEIKSACEYRPFEKCDYSSRISNEICCKKLEYIMKQLDDMKQSIERYDSSV 134
           V LR+EIKSACEYRPFEKCDY SRI+NEIC KK+E+IM QLD MKQ+I+ Y ++V
Sbjct: 61  VALRDEIKSACEYRPFEKCDYGSRIANEICHKKVEFIMSQLDAMKQTIDEYHAAV 115


>ref|NP_974205.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75123851|sp|Q6ID77.1|MED11_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           11 gi|48310228|gb|AAT41779.1| At3g01435 [Arabidopsis
           thaliana] gi|52218796|gb|AAU29468.1| At3g01435
           [Arabidopsis thaliana] gi|110738543|dbj|BAF01197.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332640145|gb|AEE73666.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 115

 Score =  182 bits (461), Expect = 3e-44
 Identities = 85/114 (74%), Positives = 104/114 (91%)
 Frame = -1

Query: 478 MDSQGQNTSLQRLHHVEKRVVRVLELAGGVMDELSNPTGPRVEVVNNHCREFMQSIKDIQ 299
           MD Q QNTSLQRL +VE RVV+VLELAGGVM+EL++P+GP+ E VN+HCREFMQS+KDIQ
Sbjct: 1   MDPQTQNTSLQRLQNVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMKDIQ 60

Query: 298 VTLREEIKSACEYRPFEKCDYSSRISNEICCKKLEYIMKQLDDMKQSIERYDSS 137
           VTLREEIKSACEYRPFEKCDY++RI+NEIC +KLEY++ QL+D+KQ+ +RY SS
Sbjct: 61  VTLREEIKSACEYRPFEKCDYNARIANEICFQKLEYVLTQLEDLKQTADRYPSS 114


>ref|XP_002269953.1| PREDICTED: uncharacterized protein LOC100255926 [Vitis vinifera]
           gi|297734129|emb|CBI15376.3| unnamed protein product
           [Vitis vinifera]
          Length = 115

 Score =  181 bits (459), Expect = 6e-44
 Identities = 85/115 (73%), Positives = 101/115 (87%)
 Frame = -1

Query: 478 MDSQGQNTSLQRLHHVEKRVVRVLELAGGVMDELSNPTGPRVEVVNNHCREFMQSIKDIQ 299
           MDSQ  NTSLQRL +VEKR+++VLELAGGVMDEL NP+GPR E+++ HC EFMQ IKDIQ
Sbjct: 1   MDSQTPNTSLQRLQNVEKRIIKVLELAGGVMDELCNPSGPRKELLSIHCGEFMQLIKDIQ 60

Query: 298 VTLREEIKSACEYRPFEKCDYSSRISNEICCKKLEYIMKQLDDMKQSIERYDSSV 134
           +TLR+EIKSACEYRPFEKCDY SRISNEICCKKLEY++ QLD MK++I+ Y  +V
Sbjct: 61  MTLRDEIKSACEYRPFEKCDYISRISNEICCKKLEYVISQLDGMKETIDEYHDAV 115


>ref|XP_002882182.1| hypothetical protein ARALYDRAFT_317046 [Arabidopsis lyrata subsp.
           lyrata] gi|297328022|gb|EFH58441.1| hypothetical protein
           ARALYDRAFT_317046 [Arabidopsis lyrata subsp. lyrata]
          Length = 115

 Score =  180 bits (457), Expect = 1e-43
 Identities = 85/114 (74%), Positives = 103/114 (90%)
 Frame = -1

Query: 478 MDSQGQNTSLQRLHHVEKRVVRVLELAGGVMDELSNPTGPRVEVVNNHCREFMQSIKDIQ 299
           MD Q QNTSLQRL +VE RVV+VLELAGGVM+EL++P+GP+ E VN+HCREFMQS+KDIQ
Sbjct: 1   MDPQTQNTSLQRLQNVENRVVKVLELAGGVMEELASPSGPKKEFVNSHCREFMQSMKDIQ 60

Query: 298 VTLREEIKSACEYRPFEKCDYSSRISNEICCKKLEYIMKQLDDMKQSIERYDSS 137
           VTLREEIKSACEYRPFEKCDY++RI+NEIC +KLEY++ QLDD+KQ+  +Y SS
Sbjct: 61  VTLREEIKSACEYRPFEKCDYNARIANEICFQKLEYVLTQLDDLKQTAGQYPSS 114


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