BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00018228
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   160   6e-40
ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi...   155   2e-38
gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope...   161   5e-38
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              160   8e-38
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   160   8e-38

>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  160 bits (404), Expect(2) = 6e-40
 Identities = 76/105 (72%), Positives = 93/105 (88%)
 Frame = -3

Query: 360  RLTTSIRMVAKGVLKEHLIHVANSMTCTGNLIGFNTGGYKALFRSLSVQIPFTEATLFTP 181
            RL+ S+ MV+KGVL +HLI +ANSMTCTGN+IGFN+GGYKAL R+L++Q+PFTEATLFTP
Sbjct: 1129 RLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNIQVPFTEATLFTP 1188

Query: 180  RKCFEKAAEKCPLDSLSSTVASCSFGKRVPVGTGSRFEIVEQERD 46
            RKCFEKAAEKC  DSLSS VASCS+GK V VGTGSRF+I+  +++
Sbjct: 1189 RKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKE 1233



 Score = 29.3 bits (64), Expect(2) = 6e-40
 Identities = 12/21 (57%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
 Frame = -1

Query: 65   LWNKKEMGLNQ-NAVDIYNFL 6
            LW++KE+G  Q + VD+YNFL
Sbjct: 1228 LWDQKELGCKQDDVVDVYNFL 1248


>ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi|297325678|gb|EFH56098.1|
            NRPD1b [Arabidopsis lyrata subsp. lyrata]
          Length = 1947

 Score =  155 bits (393), Expect(2) = 2e-38
 Identities = 71/105 (67%), Positives = 93/105 (88%)
 Frame = -3

Query: 360  RLTTSIRMVAKGVLKEHLIHVANSMTCTGNLIGFNTGGYKALFRSLSVQIPFTEATLFTP 181
            RL+ S+RMV+KGVLKEH+I +AN+MTC+GN++GFN+GGYKAL RSL+++ PFTEATL TP
Sbjct: 1131 RLSASVRMVSKGVLKEHIILLANNMTCSGNMLGFNSGGYKALTRSLNIKAPFTEATLITP 1190

Query: 180  RKCFEKAAEKCPLDSLSSTVASCSFGKRVPVGTGSRFEIVEQERD 46
            R+CFEKAAEKC  DSLS+ V SCS+GKRV VGTGS+FE++  +++
Sbjct: 1191 RRCFEKAAEKCHTDSLSTVVGSCSWGKRVDVGTGSQFELLWNQKE 1235



 Score = 28.5 bits (62), Expect(2) = 2e-38
 Identities = 12/22 (54%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = -1

Query: 65   LWNKKEMGL-NQNAVDIYNFLQ 3
            LWN+KE GL ++   D+Y+FLQ
Sbjct: 1230 LWNQKETGLDDKEETDVYSFLQ 1251


>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1127

 Score =  161 bits (408), Expect = 5e-38
 Identities = 78/105 (74%), Positives = 91/105 (86%)
 Frame = -3

Query: 360 RLTTSIRMVAKGVLKEHLIHVANSMTCTGNLIGFNTGGYKALFRSLSVQIPFTEATLFTP 181
           RL+TS+ MV KGVLK+HL+ +ANSMTC GNL+GFN GG KAL RSL+VQIPFTEATLFTP
Sbjct: 685 RLSTSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLNVQIPFTEATLFTP 744

Query: 180 RKCFEKAAEKCPLDSLSSTVASCSFGKRVPVGTGSRFEIVEQERD 46
           RKCFE+AAEKC +DSLSS VASCS+GK V VGTGSRFE++   R+
Sbjct: 745 RKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRN 789


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/100 (77%), Positives = 90/100 (90%)
 Frame = -3

Query: 360  RLTTSIRMVAKGVLKEHLIHVANSMTCTGNLIGFNTGGYKALFRSLSVQIPFTEATLFTP 181
            RL+ S+ MVAKGVLKEHLI +ANSMTC GNLIGFN+GGYKAL R+L++Q+PFTEATLFTP
Sbjct: 1194 RLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEATLFTP 1253

Query: 180  RKCFEKAAEKCPLDSLSSTVASCSFGKRVPVGTGSRFEIV 61
            RKCFEKA+EKC  DSLSS VASCS+GK V VGTGSRF+++
Sbjct: 1254 RKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVL 1293


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  160 bits (406), Expect = 8e-38
 Identities = 77/100 (77%), Positives = 90/100 (90%)
 Frame = -3

Query: 360  RLTTSIRMVAKGVLKEHLIHVANSMTCTGNLIGFNTGGYKALFRSLSVQIPFTEATLFTP 181
            RL+ S+ MVAKGVLKEHLI +ANSMTC GNLIGFN+GGYKAL R+L++Q+PFTEATLFTP
Sbjct: 1134 RLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEATLFTP 1193

Query: 180  RKCFEKAAEKCPLDSLSSTVASCSFGKRVPVGTGSRFEIV 61
            RKCFEKA+EKC  DSLSS VASCS+GK V VGTGSRF+++
Sbjct: 1194 RKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVL 1233