BLASTX nr result

ID: Papaver22_contig00018006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00018006
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog ...    63   4e-10
ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog ...    62   2e-09
ref|XP_002516197.1| DNA repair protein rad51, putative [Ricinus ...    62   2e-09
ref|XP_002449862.1| hypothetical protein SORBIDRAFT_05g024565 [S...    61   5e-09
ref|XP_002463076.1| hypothetical protein SORBIDRAFT_02g037320 [S...    60   6e-09

>ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog [Cucumis sativus]
           gi|449518135|ref|XP_004166099.1| PREDICTED: DNA repair
           protein RAD51 homolog [Cucumis sativus]
          Length = 340

 Score = 63.2 bits (152), Expect(2) = 4e-10
 Identities = 40/81 (49%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = +3

Query: 30  LRSFQLPSQSRELDTVFEGGTKT*SLNESYGEFRRGKPQLCYTFARHLSTSPDQLSW*RK 209
           L   QL S SRELD + EGG +T S+ E YGEFR GK QLC+T         DQ     K
Sbjct: 98  LEIIQLTSGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGK 157

Query: 210 SSVH*CQGTFCP-*LLQIADR 269
           +     +GTF P  LLQIADR
Sbjct: 158 AMYIDAEGTFRPQRLLQIADR 178



 Score = 26.2 bits (56), Expect(2) = 4e-10
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +2

Query: 2   SAGQLHPQMLEIIPVT 49
           SAGQLH Q LEII +T
Sbjct: 89  SAGQLHAQRLEIIQLT 104


>ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog [Vitis vinifera]
           gi|297738498|emb|CBI27743.3| unnamed protein product
           [Vitis vinifera]
          Length = 337

 Score = 62.4 bits (150), Expect(2) = 2e-09
 Identities = 39/81 (48%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = +3

Query: 30  LRSFQLPSQSRELDTVFEGGTKT*SLNESYGEFRRGKPQLCYTFARHLSTSPDQLSW*RK 209
           L   Q+ S SRELD + EGG +T S+ E YGEFR GK QLC+T         DQ     K
Sbjct: 95  LEIIQITSGSRELDKILEGGLETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGK 154

Query: 210 SSVH*CQGTFCP-*LLQIADR 269
           +     +GTF P  LLQIADR
Sbjct: 155 AMYIDAEGTFRPQRLLQIADR 175



 Score = 24.6 bits (52), Expect(2) = 2e-09
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +2

Query: 2   SAGQLHPQMLEIIPVT 49
           SA QLH Q LEII +T
Sbjct: 86  SASQLHAQRLEIIQIT 101


>ref|XP_002516197.1| DNA repair protein rad51, putative [Ricinus communis]
           gi|223544683|gb|EEF46199.1| DNA repair protein rad51,
           putative [Ricinus communis]
          Length = 294

 Score = 62.4 bits (150), Expect(2) = 2e-09
 Identities = 39/81 (48%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = +3

Query: 30  LRSFQLPSQSRELDTVFEGGTKT*SLNESYGEFRRGKPQLCYTFARHLSTSPDQLSW*RK 209
           L   Q+ S SRELD + EGG +T S+ E YGEFR GK QLC+T         DQ     K
Sbjct: 99  LEIIQITSGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGK 158

Query: 210 SSVH*CQGTFCP-*LLQIADR 269
           +     +GTF P  LLQIADR
Sbjct: 159 AMYIDAEGTFRPQRLLQIADR 179



 Score = 24.6 bits (52), Expect(2) = 2e-09
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +2

Query: 2   SAGQLHPQMLEIIPVT 49
           SA QLH Q LEII +T
Sbjct: 90  SASQLHAQRLEIIQIT 105


>ref|XP_002449862.1| hypothetical protein SORBIDRAFT_05g024565 [Sorghum bicolor]
           gi|241935705|gb|EES08850.1| hypothetical protein
           SORBIDRAFT_05g024565 [Sorghum bicolor]
          Length = 340

 Score = 60.8 bits (146), Expect(2) = 5e-09
 Identities = 38/81 (46%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = +3

Query: 30  LRSFQLPSQSRELDTVFEGGTKT*SLNESYGEFRRGKPQLCYTFARHLSTSPDQLSW*RK 209
           L   Q+ + SRELD + EGG +T S+ E YGEFR GK QLC+T         DQ     K
Sbjct: 95  LEIIQVTTGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGK 154

Query: 210 SSVH*CQGTFCP-*LLQIADR 269
           +     +GTF P  LLQIADR
Sbjct: 155 AMYIDAEGTFRPQRLLQIADR 175



 Score = 25.0 bits (53), Expect(2) = 5e-09
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = +2

Query: 2   SAGQLHPQMLEIIPVT 49
           SA QLH Q LEII VT
Sbjct: 86  SASQLHAQRLEIIQVT 101


>ref|XP_002463076.1| hypothetical protein SORBIDRAFT_02g037320 [Sorghum bicolor]
           gi|241926453|gb|EER99597.1| hypothetical protein
           SORBIDRAFT_02g037320 [Sorghum bicolor]
          Length = 344

 Score = 60.5 bits (145), Expect(2) = 6e-09
 Identities = 38/81 (46%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = +3

Query: 30  LRSFQLPSQSRELDTVFEGGTKT*SLNESYGEFRRGKPQLCYTFARHLSTSPDQLSW*RK 209
           L   Q+ + SRELD + EGG +T S+ E YGEFR GK QLC+T         DQ     K
Sbjct: 102 LEIIQVTTGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGK 161

Query: 210 SSVH*CQGTFCP-*LLQIADR 269
           +     +GTF P  LLQIADR
Sbjct: 162 ALYIDAEGTFRPQRLLQIADR 182



 Score = 25.0 bits (53), Expect(2) = 6e-09
 Identities = 12/16 (75%), Positives = 12/16 (75%)
 Frame = +2

Query: 2   SAGQLHPQMLEIIPVT 49
           SA QLH Q LEII VT
Sbjct: 93  SASQLHAQRLEIIQVT 108


Top