BLASTX nr result

ID: Papaver22_contig00017704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00017704
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|2...   321   7e-86
ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 is...   319   3e-85
ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is...   319   3e-85
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]   317   1e-84
ref|XP_002520330.1| replication factor C / DNA polymerase III ga...   315   3e-84

>ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|222856905|gb|EEE94452.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  321 bits (822), Expect = 7e-86
 Identities = 166/196 (84%), Positives = 175/196 (89%)
 Frame = -3

Query: 588 PGTGKTTTALAIAHQLYGPELYKARVLELNASDDRGINVVRTKIKNFAAIAVGSAGRQGP 409
           PGTGKTTTALAIAHQLYGPELYK+RVLELNASDDRGINVVRTKIK+FAA+AVGS  RQG 
Sbjct: 51  PGTGKTTTALAIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGV 110

Query: 408 YPCPPYKIIILDEADSMTEDAQNALRRXXXXXXXXXXXXXXXMETYSKVTRFFFICNYIS 229
           YPCPPYKIIILDEADSMTEDAQNALRR               METYSKVTRFFFICNYIS
Sbjct: 111 YPCPPYKIIILDEADSMTEDAQNALRRT--------------METYSKVTRFFFICNYIS 156

Query: 228 RIIEPLASRCAKFRFKPLTEDIMTSRILHICKEEGLFLDSEALSTLSSISQGDLRRAITH 49
           RIIEPLASRCAKFRFKPL E+IM++RILHIC EEGL LD+EALSTLSS+SQGDLRRAIT+
Sbjct: 157 RIIEPLASRCAKFRFKPLPEEIMSNRILHICNEEGLTLDTEALSTLSSVSQGDLRRAITY 216

Query: 48  LQGAARLFGSSISSKD 1
           LQGAARLFGSSISSKD
Sbjct: 217 LQGAARLFGSSISSKD 232


>ref|XP_002285875.1| PREDICTED: replication factor C subunit 4 isoform 2 [Vitis
           vinifera]
          Length = 329

 Score =  319 bits (817), Expect = 3e-85
 Identities = 167/196 (85%), Positives = 175/196 (89%)
 Frame = -3

Query: 588 PGTGKTTTALAIAHQLYGPELYKARVLELNASDDRGINVVRTKIKNFAAIAVGSAGRQGP 409
           PGTGKTTTALAIAHQL+GPELYK+RVLELNASDDRGINVVRTKIK+FAA+AVGS  RQG 
Sbjct: 39  PGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGG 98

Query: 408 YPCPPYKIIILDEADSMTEDAQNALRRXXXXXXXXXXXXXXXMETYSKVTRFFFICNYIS 229
           YPCPPYKIIILDEADSMTEDAQNALRR               METYSKVTRFFFICNYIS
Sbjct: 99  YPCPPYKIIILDEADSMTEDAQNALRRT--------------METYSKVTRFFFICNYIS 144

Query: 228 RIIEPLASRCAKFRFKPLTEDIMTSRILHICKEEGLFLDSEALSTLSSISQGDLRRAITH 49
           RIIEPLASRCAKFRFKPL+E+IM+SRILHICKEE L LDSEALSTLSSISQGDLRRAIT+
Sbjct: 145 RIIEPLASRCAKFRFKPLSEEIMSSRILHICKEEELNLDSEALSTLSSISQGDLRRAITY 204

Query: 48  LQGAARLFGSSISSKD 1
           LQGAARLFGS ISSKD
Sbjct: 205 LQGAARLFGSIISSKD 220


>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis
           vinifera] gi|302141781|emb|CBI18984.3| unnamed protein
           product [Vitis vinifera]
          Length = 341

 Score =  319 bits (817), Expect = 3e-85
 Identities = 167/196 (85%), Positives = 175/196 (89%)
 Frame = -3

Query: 588 PGTGKTTTALAIAHQLYGPELYKARVLELNASDDRGINVVRTKIKNFAAIAVGSAGRQGP 409
           PGTGKTTTALAIAHQL+GPELYK+RVLELNASDDRGINVVRTKIK+FAA+AVGS  RQG 
Sbjct: 51  PGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGG 110

Query: 408 YPCPPYKIIILDEADSMTEDAQNALRRXXXXXXXXXXXXXXXMETYSKVTRFFFICNYIS 229
           YPCPPYKIIILDEADSMTEDAQNALRR               METYSKVTRFFFICNYIS
Sbjct: 111 YPCPPYKIIILDEADSMTEDAQNALRRT--------------METYSKVTRFFFICNYIS 156

Query: 228 RIIEPLASRCAKFRFKPLTEDIMTSRILHICKEEGLFLDSEALSTLSSISQGDLRRAITH 49
           RIIEPLASRCAKFRFKPL+E+IM+SRILHICKEE L LDSEALSTLSSISQGDLRRAIT+
Sbjct: 157 RIIEPLASRCAKFRFKPLSEEIMSSRILHICKEEELNLDSEALSTLSSISQGDLRRAITY 216

Query: 48  LQGAARLFGSSISSKD 1
           LQGAARLFGS ISSKD
Sbjct: 217 LQGAARLFGSIISSKD 232


>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
          Length = 341

 Score =  317 bits (812), Expect = 1e-84
 Identities = 166/196 (84%), Positives = 174/196 (88%)
 Frame = -3

Query: 588 PGTGKTTTALAIAHQLYGPELYKARVLELNASDDRGINVVRTKIKNFAAIAVGSAGRQGP 409
           PGTGKTTTALAIAHQL+GPELYK+RVLELNASDDRGINVVRTKIK+FA +AVGS  RQG 
Sbjct: 51  PGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAXVAVGSGHRQGG 110

Query: 408 YPCPPYKIIILDEADSMTEDAQNALRRXXXXXXXXXXXXXXXMETYSKVTRFFFICNYIS 229
           YPCPPYKIIILDEADSMTEDAQNALRR               METYSKVTRFFFICNYIS
Sbjct: 111 YPCPPYKIIILDEADSMTEDAQNALRRT--------------METYSKVTRFFFICNYIS 156

Query: 228 RIIEPLASRCAKFRFKPLTEDIMTSRILHICKEEGLFLDSEALSTLSSISQGDLRRAITH 49
           RIIEPLASRCAKFRFKPL+E+IM+SRILHICKEE L LDSEALSTLSSISQGDLRRAIT+
Sbjct: 157 RIIEPLASRCAKFRFKPLSEEIMSSRILHICKEEELNLDSEALSTLSSISQGDLRRAITY 216

Query: 48  LQGAARLFGSSISSKD 1
           LQGAARLFGS ISSKD
Sbjct: 217 LQGAARLFGSIISSKD 232


>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223540549|gb|EEF42116.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 342

 Score =  315 bits (808), Expect = 3e-84
 Identities = 161/196 (82%), Positives = 175/196 (89%)
 Frame = -3

Query: 588 PGTGKTTTALAIAHQLYGPELYKARVLELNASDDRGINVVRTKIKNFAAIAVGSAGRQGP 409
           PGTGKTTTALAIAHQL+GPELYK+RVLELNASDDRGINVVRTKIKNFAA+AVGS  R G 
Sbjct: 51  PGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGQRAGG 110

Query: 408 YPCPPYKIIILDEADSMTEDAQNALRRXXXXXXXXXXXXXXXMETYSKVTRFFFICNYIS 229
           YPCPPYKIIILDEADSMTEDAQNALRR               METYSKVTRFFF+CNYIS
Sbjct: 111 YPCPPYKIIILDEADSMTEDAQNALRRT--------------METYSKVTRFFFLCNYIS 156

Query: 228 RIIEPLASRCAKFRFKPLTEDIMTSRILHICKEEGLFLDSEALSTLSSISQGDLRRAITH 49
           RIIEPLASRCAKFRFKPL+E+IM+SR+LHIC+EEGL LD+EALSTLS +SQGDLRRAIT+
Sbjct: 157 RIIEPLASRCAKFRFKPLSEEIMSSRVLHICREEGLNLDAEALSTLSYVSQGDLRRAITY 216

Query: 48  LQGAARLFGSSISSKD 1
           LQGAARL+GS+ISSKD
Sbjct: 217 LQGAARLYGSTISSKD 232


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