BLASTX nr result

ID: Papaver22_contig00017420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00017420
         (1064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17535.3| unnamed protein product [Vitis vinifera]              123   7e-26
ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotei...   123   7e-26
ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Sela...   122   2e-25
gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]      120   4e-25
dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]    118   2e-24

>emb|CBI17535.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  123 bits (309), Expect = 7e-26
 Identities = 61/83 (73%), Positives = 66/83 (79%)
 Frame = -1

Query: 251 KVRMITDKESNKPRGYAFIEYAHTRDMKAAYKQADGRKLDNKRVLVDVERGRTVPNWXXX 72
           +VR+ITDKE++KPRGYAFIEY HTRDMKAAYKQADGRKLDN+RVLVDVERGRTVPNW   
Sbjct: 166 RVRLITDKETSKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPR 225

Query: 71  XXXXXXXXXXXXGEEVNQKYSGR 3
                       GEEVN KYSGR
Sbjct: 226 RLGGGLGTTRVGGEEVNPKYSGR 248


>ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
           vinifera]
          Length = 514

 Score =  123 bits (309), Expect = 7e-26
 Identities = 61/83 (73%), Positives = 66/83 (79%)
 Frame = -1

Query: 251 KVRMITDKESNKPRGYAFIEYAHTRDMKAAYKQADGRKLDNKRVLVDVERGRTVPNWXXX 72
           +VR+ITDKE++KPRGYAFIEY HTRDMKAAYKQADGRKLDN+RVLVDVERGRTVPNW   
Sbjct: 166 RVRLITDKETSKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPR 225

Query: 71  XXXXXXXXXXXXGEEVNQKYSGR 3
                       GEEVN KYSGR
Sbjct: 226 RLGGGLGTTRVGGEEVNPKYSGR 248


>ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Selaginella moellendorffii]
           gi|300151088|gb|EFJ17735.1| hypothetical protein
           SELMODRAFT_154282 [Selaginella moellendorffii]
          Length = 246

 Score =  122 bits (305), Expect = 2e-25
 Identities = 59/83 (71%), Positives = 66/83 (79%)
 Frame = -1

Query: 251 KVRMITDKESNKPRGYAFIEYAHTRDMKAAYKQADGRKLDNKRVLVDVERGRTVPNWXXX 72
           +VR++ DK+SNKPRGYAFIEY HTRDMKAAYKQADGRK+DN+RVLVDVERGRTVPNW   
Sbjct: 36  QVRLVHDKDSNKPRGYAFIEYFHTRDMKAAYKQADGRKIDNRRVLVDVERGRTVPNWRPR 95

Query: 71  XXXXXXXXXXXXGEEVNQKYSGR 3
                       G+EVNQKYSGR
Sbjct: 96  RLGGGLGSTRVGGDEVNQKYSGR 118


>gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
          Length = 532

 Score =  120 bits (302), Expect = 4e-25
 Identities = 57/82 (69%), Positives = 65/82 (79%)
 Frame = -1

Query: 248 VRMITDKESNKPRGYAFIEYAHTRDMKAAYKQADGRKLDNKRVLVDVERGRTVPNWXXXX 69
           VR++TDK +NKPRGYAFIEY HTRDMKAAYKQADG+K+DN+RVLVDVERGRTVPNW    
Sbjct: 184 VRLVTDKSTNKPRGYAFIEYVHTRDMKAAYKQADGKKIDNRRVLVDVERGRTVPNWRPRR 243

Query: 68  XXXXXXXXXXXGEEVNQKYSGR 3
                      GEE+NQ+YSGR
Sbjct: 244 LGGGLGTTRVGGEELNQRYSGR 265


>dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
          Length = 506

 Score =  118 bits (296), Expect = 2e-24
 Identities = 57/83 (68%), Positives = 65/83 (78%)
 Frame = -1

Query: 251 KVRMITDKESNKPRGYAFIEYAHTRDMKAAYKQADGRKLDNKRVLVDVERGRTVPNWXXX 72
           +VR++TD ESNKPRGYAFIEY HTRDMKAAYKQADGRK++ +RVLVDVERGRTVPNW   
Sbjct: 167 RVRLVTDTESNKPRGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPR 226

Query: 71  XXXXXXXXXXXXGEEVNQKYSGR 3
                       GEEVNQ++SGR
Sbjct: 227 RLGGGLGTTRVGGEEVNQRHSGR 249


Top