BLASTX nr result

ID: Papaver22_contig00017416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00017416
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|2...   233   2e-59
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420...   231   6e-59
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   230   8e-59
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   229   1e-58
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h...   227   9e-58

>ref|XP_002322252.1| predicted protein [Populus trichocarpa] gi|222869248|gb|EEF06379.1|
            predicted protein [Populus trichocarpa]
          Length = 2157

 Score =  233 bits (593), Expect = 2e-59
 Identities = 112/140 (80%), Positives = 123/140 (87%)
 Frame = +3

Query: 3    IETVFDLVEMEDDERXXXXXXXXXXXXDIARFCNRFPNIDMTYEVLESDNVMAGDDVSLQ 182
            IETVFDLVEMEDDER            DI RFCNRFPNIDM+YEV++ DNV AG+D++L 
Sbjct: 1993 IETVFDLVEMEDDERRELLQMSDSQLLDIVRFCNRFPNIDMSYEVMDGDNVRAGEDITLL 2052

Query: 183  VTLERDLEGRSEVGPVDAPRYPKAKEEGWWLVVGDSKTNQLLAIKRVSLQRKSKVKLEFA 362
            VTLERDLEGR+EVGPVD+PRYPKAKEEGWWLVVGD+K+NQLLAIKRVSLQRKSKVKLEFA
Sbjct: 2053 VTLERDLEGRTEVGPVDSPRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKVKLEFA 2112

Query: 363  APTETGRKSYTLYFMCDSYL 422
            AP +TGRKSYTLYFMCDSYL
Sbjct: 2113 APADTGRKSYTLYFMCDSYL 2132


>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
            putative [Ricinus communis]
          Length = 1809

 Score =  231 bits (588), Expect = 6e-59
 Identities = 111/140 (79%), Positives = 123/140 (87%)
 Frame = +3

Query: 3    IETVFDLVEMEDDERXXXXXXXXXXXXDIARFCNRFPNIDMTYEVLESDNVMAGDDVSLQ 182
            IETVFDLVEMEDDER            D+ RFCNRFPNIDM+YEV++ ++V  GDD++LQ
Sbjct: 1649 IETVFDLVEMEDDERRELLQMSNSELLDVVRFCNRFPNIDMSYEVMDGEDVRMGDDITLQ 1708

Query: 183  VTLERDLEGRSEVGPVDAPRYPKAKEEGWWLVVGDSKTNQLLAIKRVSLQRKSKVKLEFA 362
            VTLERDLEGR+EVGPVDA RYPKAKEEGWWLVVGD+K+NQLLAIKRVSLQRKSKVKLEFA
Sbjct: 1709 VTLERDLEGRTEVGPVDAARYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKVKLEFA 1768

Query: 363  APTETGRKSYTLYFMCDSYL 422
            AP+ETGRKSYTLYFMCDSYL
Sbjct: 1769 APSETGRKSYTLYFMCDSYL 1788


>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score =  230 bits (587), Expect = 8e-59
 Identities = 112/140 (80%), Positives = 122/140 (87%)
 Frame = +3

Query: 3    IETVFDLVEMEDDERXXXXXXXXXXXXDIARFCNRFPNIDMTYEVLESDNVMAGDDVSLQ 182
            IETVFDLVEMEDDER            DIARFCNRFPNID+TYEVL+S+N+ AGDD++LQ
Sbjct: 2016 IETVFDLVEMEDDERRELLQMSDSQLLDIARFCNRFPNIDITYEVLDSENLRAGDDITLQ 2075

Query: 183  VTLERDLEGRSEVGPVDAPRYPKAKEEGWWLVVGDSKTNQLLAIKRVSLQRKSKVKLEFA 362
            V LERDLEGR+EVG VDAPRYPKAKEEGWWLVVGD+K+NQLLAIKRV+LQRKSKVKLEFA
Sbjct: 2076 VMLERDLEGRTEVGSVDAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVALQRKSKVKLEFA 2135

Query: 363  APTETGRKSYTLYFMCDSYL 422
             P E GRKSYTLYFMCDSYL
Sbjct: 2136 VPAEAGRKSYTLYFMCDSYL 2155


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  229 bits (585), Expect = 1e-58
 Identities = 112/140 (80%), Positives = 121/140 (86%)
 Frame = +3

Query: 3    IETVFDLVEMEDDERXXXXXXXXXXXXDIARFCNRFPNIDMTYEVLESDNVMAGDDVSLQ 182
            IETVFDLVEMEDDER            DIARFCNRFPNID TYEVL+S+N+ AGDD++LQ
Sbjct: 1983 IETVFDLVEMEDDERRELLQMSDSQLLDIARFCNRFPNIDXTYEVLDSENLRAGDDITLQ 2042

Query: 183  VTLERDLEGRSEVGPVDAPRYPKAKEEGWWLVVGDSKTNQLLAIKRVSLQRKSKVKLEFA 362
            V LERDLEGR+EVG VDAPRYPKAKEEGWWLVVGD+K+NQLLAIKRV+LQRKSKVKLEFA
Sbjct: 2043 VMLERDLEGRTEVGSVDAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVALQRKSKVKLEFA 2102

Query: 363  APTETGRKSYTLYFMCDSYL 422
             P E GRKSYTLYFMCDSYL
Sbjct: 2103 VPAEAGRKSYTLYFMCDSYL 2122


>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
            truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
            ribonucleoprotein 200 kDa helicase [Medicago truncatula]
          Length = 2223

 Score =  227 bits (578), Expect = 9e-58
 Identities = 107/140 (76%), Positives = 121/140 (86%)
 Frame = +3

Query: 3    IETVFDLVEMEDDERXXXXXXXXXXXXDIARFCNRFPNIDMTYEVLESDNVMAGDDVSLQ 182
            IETVFDL+EMEDDER            DIARFCNRFPNID++YE+L++DNV AGDD++LQ
Sbjct: 2065 IETVFDLLEMEDDERRELLNMTDSQLLDIARFCNRFPNIDLSYEILDNDNVRAGDDITLQ 2124

Query: 183  VTLERDLEGRSEVGPVDAPRYPKAKEEGWWLVVGDSKTNQLLAIKRVSLQRKSKVKLEFA 362
            VTLERDLEG++EVGPVDAPRYPKAKEEGWWLVVGD+KTN LLAIKRVSLQRK K KLEFA
Sbjct: 2125 VTLERDLEGKTEVGPVDAPRYPKAKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFA 2184

Query: 363  APTETGRKSYTLYFMCDSYL 422
            AP + G+KSY LYFMCDSY+
Sbjct: 2185 APADAGKKSYVLYFMCDSYM 2204


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