BLASTX nr result

ID: Papaver22_contig00017235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00017235
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597914.1| Pre-mRNA-processing-splicing factor [Medicag...    78   6e-13
ref|XP_003626843.1| Pre-mRNA splicing factor [Medicago truncatul...    78   6e-13
ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact...    77   1e-12
ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing fact...    77   1e-12
emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera]    77   1e-12

>ref|XP_003597914.1| Pre-mRNA-processing-splicing factor [Medicago truncatula]
            gi|355486962|gb|AES68165.1| Pre-mRNA-processing-splicing
            factor [Medicago truncatula]
          Length = 2398

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 31/41 (75%), Positives = 38/41 (92%)
 Frame = +3

Query: 3    IKLGTPREYYHEDHRPTHYLDFSNIEEGDNLAEGDREDKFT 125
            +KLGTPREYYHEDHRPTH+L+FSN+EEG+ + EGDRED F+
Sbjct: 2358 VKLGTPREYYHEDHRPTHFLEFSNMEEGETITEGDREDTFS 2398


>ref|XP_003626843.1| Pre-mRNA splicing factor [Medicago truncatula]
            gi|355520865|gb|AET01319.1| Pre-mRNA splicing factor
            [Medicago truncatula]
          Length = 2337

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 31/41 (75%), Positives = 39/41 (95%)
 Frame = +3

Query: 3    IKLGTPREYYHEDHRPTHYLDFSNIEEGDNLAEGDREDKFT 125
            +KLGTPREYYHEDHRPTH+L+FSN+EEG+ +A+GDRED F+
Sbjct: 2297 VKLGTPREYYHEDHRPTHFLEFSNMEEGETIAKGDREDTFS 2337


>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
            [Vitis vinifera]
          Length = 2367

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = +3

Query: 3    IKLGTPREYYHEDHRPTHYLDFSNIEEGDNLAEGDREDKFT 125
            IKLGTPREYYHEDHRPTH+L+FSN+EEG+ +AEGDRED FT
Sbjct: 2328 IKLGTPREYYHEDHRPTHFLEFSNLEEGE-MAEGDREDTFT 2367


>ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 2
            [Vitis vinifera] gi|297743472|emb|CBI36339.3| unnamed
            protein product [Vitis vinifera]
          Length = 2347

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = +3

Query: 3    IKLGTPREYYHEDHRPTHYLDFSNIEEGDNLAEGDREDKFT 125
            IKLGTPREYYHEDHRPTH+L+FSN+EEG+ +AEGDRED FT
Sbjct: 2308 IKLGTPREYYHEDHRPTHFLEFSNLEEGE-MAEGDREDTFT 2347


>emb|CAN66492.1| hypothetical protein VITISV_019851 [Vitis vinifera]
          Length = 2294

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/41 (82%), Positives = 39/41 (95%)
 Frame = +3

Query: 3    IKLGTPREYYHEDHRPTHYLDFSNIEEGDNLAEGDREDKFT 125
            IKLGTPREYYHEDHRPTH+L+FSN+EEG+ +AEGDRED FT
Sbjct: 2255 IKLGTPREYYHEDHRPTHFLEFSNLEEGE-MAEGDREDTFT 2294


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