BLASTX nr result

ID: Papaver22_contig00016963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00016963
         (1190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinu...   599   e-169
ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe...   598   e-169
ref|XP_004167772.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   592   e-167
ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   592   e-167
ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   589   e-166

>ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223533556|gb|EEF35296.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1269

 Score =  599 bits (1545), Expect = e-169
 Identities = 316/397 (79%), Positives = 333/397 (83%), Gaps = 1/397 (0%)
 Frame = -2

Query: 1189 IKYMTDGVLLRETLKDSELAKYSVIVMDEAHERSLNTDVLFGILKKVAAQRRDFKLIVTS 1010
            IKYMTDGVLLRETLKDS+L KY VIVMDEAHERSL+TDVLFGILKKV AQRRDFKLIVTS
Sbjct: 664  IKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVAQRRDFKLIVTS 723

Query: 1009 ATLDAEKFSNFFGGAPLFKIMGRTFEVDIRHSKCPCEDYVEDAVKHAFSIHITSPPGDIL 830
            ATL+AEKFSNFFG  P+F I GRTF V+  +SK PCEDYVE AVK A +IHITSPPGDIL
Sbjct: 724  ATLNAEKFSNFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDIL 783

Query: 829  IFMTGQEEIEATCFALQERMDQLASTTEKRKKLVPKLSILPIYSQLPADLQAKIFQKAED 650
            IFMTGQ+EIEA C+AL ER++QL S+T   KK VPKL ILPIYSQLPADLQAKIFQKAED
Sbjct: 784  IFMTGQDEIEAACYALAERIEQLISST---KKAVPKLLILPIYSQLPADLQAKIFQKAED 840

Query: 649  GARKCIVATNIAETSLTVDGIFYVIDSGYSKMKVYNPRMGMDALQVFPVSXXXXXXXXXX 470
            GARKCIVATNIAETSLTVDGIFYVID+GY KMKVYNPRMGMDALQVFPVS          
Sbjct: 841  GARKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGR 900

Query: 469  XXRTGPGKCYRLYTASAFENEMLPSPVPEIQRTNLGNVV-XXXXXXXXXXXXXXXXXXXX 293
              RTGPG CYRLYT SA+ NEMLPSPVPEIQRTNLGNVV                     
Sbjct: 901  AGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPP 960

Query: 292  XDNILNSMYQLWVLGALDNVGSLTDLGWKMVEFPLDPPLAKMLLKGGELGCLNEVLTIVS 113
             DNILNSMYQLWVLGAL+NVG LTDLGWKMVEFPLDPPLAKMLL G ELGCLNEVLTIVS
Sbjct: 961  QDNILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGEELGCLNEVLTIVS 1020

Query: 112  MLSVTNVFFRPKDRAEESDAAREKFFVPESDHLTLLN 2
            MLSV +VFFRPKDRAE+SDAAREKFFVPESDHLTLLN
Sbjct: 1021 MLSVPSVFFRPKDRAEQSDAAREKFFVPESDHLTLLN 1057


>ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Vitis vinifera]
          Length = 1289

 Score =  598 bits (1542), Expect = e-169
 Identities = 314/397 (79%), Positives = 334/397 (84%), Gaps = 1/397 (0%)
 Frame = -2

Query: 1189 IKYMTDGVLLRETLKDSELAKYSVIVMDEAHERSLNTDVLFGILKKVAAQRRDFKLIVTS 1010
            IKYMTDGVL+RETLKDSEL KY V+VMDEAHERSLNTDVLFGILKKV AQRRDFKLIVTS
Sbjct: 684  IKYMTDGVLMRETLKDSELDKYRVVVMDEAHERSLNTDVLFGILKKVVAQRRDFKLIVTS 743

Query: 1009 ATLDAEKFSNFFGGAPLFKIMGRTFEVDIRHSKCPCEDYVEDAVKHAFSIHITSPPGDIL 830
            ATL+A+KFSNFFG  P+F I GRTF V+I +SK PCEDYVE AVK A ++HITSPPGDIL
Sbjct: 744  ATLNAQKFSNFFGSVPIFHIPGRTFPVNILYSKTPCEDYVEGAVKQAMTVHITSPPGDIL 803

Query: 829  IFMTGQEEIEATCFALQERMDQLASTTEKRKKLVPKLSILPIYSQLPADLQAKIFQKAED 650
            IFMTGQ+EIEATC+AL ERM+QL STT   KK VPKLSILPIYSQLPADLQAKIFQKAED
Sbjct: 804  IFMTGQDEIEATCYALAERMEQLVSTT---KKGVPKLSILPIYSQLPADLQAKIFQKAED 860

Query: 649  GARKCIVATNIAETSLTVDGIFYVIDSGYSKMKVYNPRMGMDALQVFPVSXXXXXXXXXX 470
            GARKCIVATNIAETSLTVDGIFYVID+GY KMKVYNPRMGMDALQVFPVS          
Sbjct: 861  GARKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGR 920

Query: 469  XXRTGPGKCYRLYTASAFENEMLPSPVPEIQRTNLGNVV-XXXXXXXXXXXXXXXXXXXX 293
              RTGPG CYRLYT SA+ NE+L SPVPEIQRTNLGNVV                     
Sbjct: 921  AGRTGPGTCYRLYTESAYLNELLASPVPEIQRTNLGNVVLLLKSLKIENLLDFDFMDPPP 980

Query: 292  XDNILNSMYQLWVLGALDNVGSLTDLGWKMVEFPLDPPLAKMLLKGGELGCLNEVLTIVS 113
             DNILNSMYQLWVLGAL+NVG LT+LGWKMVEFPLDPPLAKMLL G +L C+NEVLTIVS
Sbjct: 981  QDNILNSMYQLWVLGALNNVGGLTELGWKMVEFPLDPPLAKMLLIGEQLECINEVLTIVS 1040

Query: 112  MLSVTNVFFRPKDRAEESDAAREKFFVPESDHLTLLN 2
            MLSV +VFFRPKDRAEESDAAREKFFVPESDHLTLLN
Sbjct: 1041 MLSVPSVFFRPKDRAEESDAAREKFFVPESDHLTLLN 1077


>ref|XP_004167772.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like, partial [Cucumis sativus]
          Length = 1178

 Score =  592 bits (1525), Expect = e-167
 Identities = 311/397 (78%), Positives = 331/397 (83%), Gaps = 1/397 (0%)
 Frame = -2

Query: 1189 IKYMTDGVLLRETLKDSELAKYSVIVMDEAHERSLNTDVLFGILKKVAAQRRDFKLIVTS 1010
            IKYMTDGVLLRETLKDS+L KY VIVMDEAHERSL+TDVLFGILKKV AQRRDFKLIVTS
Sbjct: 573  IKYMTDGVLLRETLKDSDLEKYRVIVMDEAHERSLSTDVLFGILKKVVAQRRDFKLIVTS 632

Query: 1009 ATLDAEKFSNFFGGAPLFKIMGRTFEVDIRHSKCPCEDYVEDAVKHAFSIHITSPPGDIL 830
            ATL+A+KFSNFFG  P+F I GRTF V+  +SK PCEDYVE AVK A +IHITSPPGDIL
Sbjct: 633  ATLNAQKFSNFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDIL 692

Query: 829  IFMTGQEEIEATCFALQERMDQLASTTEKRKKLVPKLSILPIYSQLPADLQAKIFQKAED 650
            IFMTGQ+EIEA CFAL ER++QL S+T   KK VPKL ILPIYSQLPADLQAKIFQKAED
Sbjct: 693  IFMTGQDEIEAACFALAERIEQLISST---KKGVPKLLILPIYSQLPADLQAKIFQKAED 749

Query: 649  GARKCIVATNIAETSLTVDGIFYVIDSGYSKMKVYNPRMGMDALQVFPVSXXXXXXXXXX 470
            GARKCIVATNIAETSLTVDGIFYVID+GY KMKVYNPRMGMDALQVFPVS          
Sbjct: 750  GARKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGR 809

Query: 469  XXRTGPGKCYRLYTASAFENEMLPSPVPEIQRTNLGNVV-XXXXXXXXXXXXXXXXXXXX 293
              RTGPG CYRLYT SA+ NEMLPSPVPEIQRTNLGNVV                     
Sbjct: 810  AGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPP 869

Query: 292  XDNILNSMYQLWVLGALDNVGSLTDLGWKMVEFPLDPPLAKMLLKGGELGCLNEVLTIVS 113
             DNILNSMYQLWVLGAL+NVG LTDLGWKMVEFPLDPPLAKMLL G +LGCL+EVLTIVS
Sbjct: 870  QDNILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVS 929

Query: 112  MLSVTNVFFRPKDRAEESDAAREKFFVPESDHLTLLN 2
            MLSV +VFFRPKDR EESDAARE+FF+PESDHLTL N
Sbjct: 930  MLSVPSVFFRPKDRVEESDAARERFFIPESDHLTLYN 966


>ref|XP_004148974.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Cucumis sativus]
          Length = 1298

 Score =  592 bits (1525), Expect = e-167
 Identities = 311/397 (78%), Positives = 331/397 (83%), Gaps = 1/397 (0%)
 Frame = -2

Query: 1189 IKYMTDGVLLRETLKDSELAKYSVIVMDEAHERSLNTDVLFGILKKVAAQRRDFKLIVTS 1010
            IKYMTDGVLLRETLKDS+L KY VIVMDEAHERSL+TDVLFGILKKV AQRRDFKLIVTS
Sbjct: 693  IKYMTDGVLLRETLKDSDLEKYRVIVMDEAHERSLSTDVLFGILKKVVAQRRDFKLIVTS 752

Query: 1009 ATLDAEKFSNFFGGAPLFKIMGRTFEVDIRHSKCPCEDYVEDAVKHAFSIHITSPPGDIL 830
            ATL+A+KFSNFFG  P+F I GRTF V+  +SK PCEDYVE AVK A +IHITSPPGDIL
Sbjct: 753  ATLNAQKFSNFFGSVPIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDIL 812

Query: 829  IFMTGQEEIEATCFALQERMDQLASTTEKRKKLVPKLSILPIYSQLPADLQAKIFQKAED 650
            IFMTGQ+EIEA CFAL ER++QL S+T   KK VPKL ILPIYSQLPADLQAKIFQKAED
Sbjct: 813  IFMTGQDEIEAACFALAERIEQLISST---KKGVPKLLILPIYSQLPADLQAKIFQKAED 869

Query: 649  GARKCIVATNIAETSLTVDGIFYVIDSGYSKMKVYNPRMGMDALQVFPVSXXXXXXXXXX 470
            GARKCIVATNIAETSLTVDGIFYVID+GY KMKVYNPRMGMDALQVFPVS          
Sbjct: 870  GARKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGR 929

Query: 469  XXRTGPGKCYRLYTASAFENEMLPSPVPEIQRTNLGNVV-XXXXXXXXXXXXXXXXXXXX 293
              RTGPG CYRLYT SA+ NEMLPSPVPEIQRTNLGNVV                     
Sbjct: 930  AGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPP 989

Query: 292  XDNILNSMYQLWVLGALDNVGSLTDLGWKMVEFPLDPPLAKMLLKGGELGCLNEVLTIVS 113
             DNILNSMYQLWVLGAL+NVG LTDLGWKMVEFPLDPPLAKMLL G +LGCL+EVLTIVS
Sbjct: 990  QDNILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVS 1049

Query: 112  MLSVTNVFFRPKDRAEESDAAREKFFVPESDHLTLLN 2
            MLSV +VFFRPKDR EESDAARE+FF+PESDHLTL N
Sbjct: 1050 MLSVPSVFFRPKDRVEESDAARERFFIPESDHLTLYN 1086


>ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Glycine max]
          Length = 1270

 Score =  589 bits (1518), Expect = e-166
 Identities = 311/397 (78%), Positives = 329/397 (82%), Gaps = 1/397 (0%)
 Frame = -2

Query: 1189 IKYMTDGVLLRETLKDSELAKYSVIVMDEAHERSLNTDVLFGILKKVAAQRRDFKLIVTS 1010
            IKYMTDGVLLRETLKDS+L KY VIVMDEAHERSL+TDVLFGILKKV AQRRDFKLIVTS
Sbjct: 665  IKYMTDGVLLRETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVAQRRDFKLIVTS 724

Query: 1009 ATLDAEKFSNFFGGAPLFKIMGRTFEVDIRHSKCPCEDYVEDAVKHAFSIHITSPPGDIL 830
            ATL+A+KFSNFFG  P+F I GRTF V+I  SK P EDYVE AVK   +IHITSPPGDIL
Sbjct: 725  ATLNAQKFSNFFGSVPIFHIPGRTFPVNILWSKTPVEDYVEGAVKQTMTIHITSPPGDIL 784

Query: 829  IFMTGQEEIEATCFALQERMDQLASTTEKRKKLVPKLSILPIYSQLPADLQAKIFQKAED 650
            IFMTGQ+EIEA C+AL ERM+Q+ S++   KK VPKL ILPIYSQLPADLQAKIFQKAED
Sbjct: 785  IFMTGQDEIEAACYALAERMEQMVSSS---KKAVPKLLILPIYSQLPADLQAKIFQKAED 841

Query: 649  GARKCIVATNIAETSLTVDGIFYVIDSGYSKMKVYNPRMGMDALQVFPVSXXXXXXXXXX 470
            GARKCIVATNIAETSLTVDGIFYVIDSGY KMKVYNPRMGMDALQVFPVS          
Sbjct: 842  GARKCIVATNIAETSLTVDGIFYVIDSGYGKMKVYNPRMGMDALQVFPVSRAAADQRAGR 901

Query: 469  XXRTGPGKCYRLYTASAFENEMLPSPVPEIQRTNLGNVV-XXXXXXXXXXXXXXXXXXXX 293
              RTGPG CYRLYT SA+ NEMLPSPVPEIQRTNLGNVV                     
Sbjct: 902  AGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKVENLLDFDFMDPPP 961

Query: 292  XDNILNSMYQLWVLGALDNVGSLTDLGWKMVEFPLDPPLAKMLLKGGELGCLNEVLTIVS 113
             DNILNSMYQLWVLGAL+NVG LTDLGWKMVEFPLDPPLAKMLL G +LGCL EVLTIVS
Sbjct: 962  QDNILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGEQLGCLEEVLTIVS 1021

Query: 112  MLSVTNVFFRPKDRAEESDAAREKFFVPESDHLTLLN 2
            MLSV +VFFRPKDRAEESDAARE+FFVPESDHLTL N
Sbjct: 1022 MLSVPSVFFRPKDRAEESDAARERFFVPESDHLTLYN 1058


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