BLASTX nr result

ID: Papaver22_contig00016635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00016635
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi...    77   1e-13
emb|CAN68274.1| hypothetical protein VITISV_032833 [Vitis vinifera]    75   1e-12
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...    72   1e-12
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...    77   2e-12
emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|72695...    77   2e-12

>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score = 77.0 bits (188), Expect(2) = 1e-13
 Identities = 34/90 (37%), Positives = 48/90 (53%)
 Frame = -1

Query: 279 GPCHVASTSGVLYYANIVDEFTKYCWLLPIITKADFKHAFISFVTRIENLLSHHVVTFRT 100
           GP  V+S  G  YY   +D  +++CW  P+  K+DF   F+ F + +ENLL   + TF++
Sbjct: 513 GPAPVSSIQGFQYYVIFIDNRSRFCWFYPLKHKSDFCSLFMKFQSFVENLLQTKIGTFQS 572

Query: 99  DNGGEXXXXXXXXFCDSKGISHELSCPHNP 10
           D GGE             GI H +SCPH P
Sbjct: 573 DGGGEFTSNRFLQHLQESGIQHYISCPHTP 602



 Score = 24.6 bits (52), Expect(2) = 1e-13
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 329 SSSVANKPLQLLHIDLW 279
           S  +A++PL+ +H DLW
Sbjct: 496 SDFIASRPLERVHCDLW 512


>emb|CAN68274.1| hypothetical protein VITISV_032833 [Vitis vinifera]
          Length = 715

 Score = 75.1 bits (183), Expect(2) = 1e-12
 Identities = 34/82 (41%), Positives = 45/82 (54%)
 Frame = -1

Query: 261 STSGVLYYANIVDEFTKYCWLLPIITKADFKHAFISFVTRIENLLSHHVVTFRTDNGGEX 82
           S SG LYY   +DEFT++CWL PI  K+D    F+ F   +E   ++ +   ++DNGGE 
Sbjct: 83  SLSGCLYYVIFIDEFTRFCWLYPISNKSDVYATFVKFKILVEKQFNYPIXKLQSDNGGEY 142

Query: 81  XXXXXXXFCDSKGISHELSCPH 16
                  F    GI H LSCPH
Sbjct: 143 CSTIFKQFLSDNGIFHRLSCPH 164



 Score = 23.1 bits (48), Expect(2) = 1e-12
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 329 SSSVANKPLQLLHIDLW 279
           SS  +  PL+L+H D+W
Sbjct: 61  SSRESTAPLELIHSDVW 77


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score = 72.0 bits (175), Expect(2) = 1e-12
 Identities = 30/90 (33%), Positives = 48/90 (53%)
 Frame = -1

Query: 279 GPCHVASTSGVLYYANIVDEFTKYCWLLPIITKADFKHAFISFVTRIENLLSHHVVTFRT 100
           GP  + S  G  YYA  +D ++++ W+ P+  K+DF + F++F   +EN L+H +  F+ 
Sbjct: 531 GPSPITSVQGFRYYAVFIDHYSRFSWIYPLKLKSDFYNIFVAFHKLVENQLNHKISVFQC 590

Query: 99  DNGGEXXXXXXXXFCDSKGISHELSCPHNP 10
           D GGE           + GI   +S PH P
Sbjct: 591 DGGGEFVNHKFLQHLQNHGIQQHISYPHTP 620



 Score = 25.8 bits (55), Expect(2) = 1e-12
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 329 SSSVANKPLQLLHIDLW 279
           SS  +N+PL+ +H DLW
Sbjct: 514 SSFTSNRPLERVHCDLW 530


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score = 76.6 bits (187), Expect(2) = 2e-12
 Identities = 34/90 (37%), Positives = 49/90 (54%)
 Frame = -1

Query: 279 GPCHVASTSGVLYYANIVDEFTKYCWLLPIITKADFKHAFISFVTRIENLLSHHVVTFRT 100
           GP  V S  G+ YYA  VD++++Y W  P+  K++F   FISF   +EN L+  +  F++
Sbjct: 521 GPSPVVSNQGLKYYAIFVDDYSRYSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQS 580

Query: 99  DNGGEXXXXXXXXFCDSKGISHELSCPHNP 10
           D GGE             GI H +SCP+ P
Sbjct: 581 DGGGEFVSNKLKTHLSEHGIHHRISCPYTP 610



 Score = 20.8 bits (42), Expect(2) = 2e-12
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 332 LSSSVANKPLQLLHIDLW 279
           +S S    PL  +H DLW
Sbjct: 503 ISDSRVLHPLDRIHCDLW 520


>emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|7269574|emb|CAB79576.1|
           putative protein [Arabidopsis thaliana]
          Length = 1318

 Score = 76.6 bits (187), Expect(2) = 2e-12
 Identities = 33/90 (36%), Positives = 49/90 (54%)
 Frame = -1

Query: 279 GPCHVASTSGVLYYANIVDEFTKYCWLLPIITKADFKHAFISFVTRIENLLSHHVVTFRT 100
           GP  + S  G  YYA  +D ++++ W+ P+  K+DF + F++F   +EN LS  +  F+ 
Sbjct: 336 GPTTITSVQGFRYYAVFIDHYSRFSWIYPLKLKSDFYNIFLAFHKLVENQLSQKISVFQC 395

Query: 99  DNGGEXXXXXXXXFCDSKGISHELSCPHNP 10
           D GGE           S GI  +LSCPH P
Sbjct: 396 DGGGEFVSHKFLQHLQSHGIQQQLSCPHTP 425



 Score = 20.4 bits (41), Expect(2) = 2e-12
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 311 KPLQLLHIDLW 279
           +PL+ +H DLW
Sbjct: 325 QPLERVHCDLW 335


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