BLASTX nr result

ID: Papaver22_contig00016348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00016348
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF98996.1| nucleoporin 98 [Daucus carota]                         61   3e-10
gb|AAD32891.1|AC005489_29 F14N23.29 [Arabidopsis thaliana]             55   1e-08
ref|NP_172510.2| Nucleoporin autopeptidase [Arabidopsis thaliana...    55   1e-08

>dbj|BAF98996.1| nucleoporin 98 [Daucus carota]
          Length = 1005

 Score = 61.2 bits (147), Expect(2) = 3e-10
 Identities = 31/58 (53%), Positives = 36/58 (62%), Gaps = 8/58 (13%)
 Frame = -1

Query: 151 DKGGPNPAGQQSSIGGFGTTTTPQPNPFGST--------PTNPFTSTTAANPFGQKTS 2
           DKGGPN A Q +   GFGT T  QPNPF S+        P NPF+S  A NPFGQK++
Sbjct: 371 DKGGPNSAAQPAGAAGFGTNT--QPNPFSSSSTFGQASAPANPFSSNNATNPFGQKSA 426



 Score = 28.1 bits (61), Expect(2) = 3e-10
 Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -3

Query: 335 VVAYAPTVEADQ-SGVQSSGKLE 270
           V AY PT EAD  +G Q +GKLE
Sbjct: 324 VAAYTPTAEADAGTGTQPAGKLE 346


>gb|AAD32891.1|AC005489_29 F14N23.29 [Arabidopsis thaliana]
          Length = 1096

 Score = 54.7 bits (130), Expect(2) = 1e-08
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 9/58 (15%)
 Frame = -1

Query: 151 DKGGPNPAGQQSSIGGFGTTTTPQPNPFG---------STPTNPFTSTTAANPFGQKT 5
           DKGGP PAGQ     GFG + + QPNPF          + PTNPF+S+T+ NPF  +T
Sbjct: 449 DKGGPLPAGQSPGNAGFGISPS-QPNPFSPSPAFGQTSANPTNPFSSSTSTNPFAPQT 505



 Score = 29.3 bits (64), Expect(2) = 1e-08
 Identities = 15/22 (68%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = -3

Query: 332 VAYAPTVEADQ-SGVQSSGKLE 270
           V YAPTVEAD  +G Q +GKLE
Sbjct: 403 VPYAPTVEADTGTGTQPAGKLE 424


>ref|NP_172510.2| Nucleoporin autopeptidase [Arabidopsis thaliana]
           gi|79317517|ref|NP_001031018.1| Nucleoporin
           autopeptidase [Arabidopsis thaliana]
           gi|19310423|gb|AAL84948.1| At1g10390/F14N23_29
           [Arabidopsis thaliana] gi|27764948|gb|AAO23595.1|
           At1g10390/F14N23_29 [Arabidopsis thaliana]
           gi|110742211|dbj|BAE99032.1| hypothetical protein
           [Arabidopsis thaliana] gi|332190453|gb|AEE28574.1|
           Nucleoporin autopeptidase [Arabidopsis thaliana]
           gi|332190454|gb|AEE28575.1| Nucleoporin autopeptidase
           [Arabidopsis thaliana]
          Length = 1041

 Score = 54.7 bits (130), Expect(2) = 1e-08
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 9/58 (15%)
 Frame = -1

Query: 151 DKGGPNPAGQQSSIGGFGTTTTPQPNPFG---------STPTNPFTSTTAANPFGQKT 5
           DKGGP PAGQ     GFG + + QPNPF          + PTNPF+S+T+ NPF  +T
Sbjct: 395 DKGGPLPAGQSPGNAGFGISPS-QPNPFSPSPAFGQTSANPTNPFSSSTSTNPFAPQT 451



 Score = 29.3 bits (64), Expect(2) = 1e-08
 Identities = 15/22 (68%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = -3

Query: 332 VAYAPTVEADQ-SGVQSSGKLE 270
           V YAPTVEAD  +G Q +GKLE
Sbjct: 349 VPYAPTVEADTGTGTQPAGKLE 370


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