BLASTX nr result

ID: Papaver22_contig00016049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00016049
         (1304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Po...   362   9e-98
gb|AFK47516.1| unknown [Lotus japonicus]                              343   4e-92
ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4...   342   1e-91
ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7...   334   3e-89
ref|XP_003603038.1| Chlorophyll a-b binding protein [Medicago tr...   333   6e-89

>ref|XP_002327136.1| light-harvesting complex I protein Lhca5 [Populus trichocarpa]
            gi|222835451|gb|EEE73886.1| light-harvesting complex I
            protein Lhca5 [Populus trichocarpa]
          Length = 266

 Score =  362 bits (930), Expect = 9e-98
 Identities = 182/242 (75%), Positives = 202/242 (83%), Gaps = 1/242 (0%)
 Frame = -1

Query: 1022 NKNTYRNPSPFVSSPAR-SSTRFARTCVHAQERPTWLPGLDPPAYLNGTLAGDYGFDPLG 846
            NK+++     F+  PA+ SSTR     VHAQ+RPTWLPGLDPP YL+GTLAGD+GFDPLG
Sbjct: 27   NKSSFGAAETFL--PAKPSSTRCTPVVVHAQQRPTWLPGLDPPPYLDGTLAGDFGFDPLG 84

Query: 845  LGEDPESLKWYVQAELVHARFAMAGVAGIXXXXXXXXXXXXXLPIWYEAGAVKFEFASTT 666
            LGEDP+SLKWYVQAELVHARFAMAGVAGI             LP+WYEAGAVKFEFAST 
Sbjct: 85   LGEDPQSLKWYVQAELVHARFAMAGVAGILFTDLLRVTGIRKLPVWYEAGAVKFEFASTR 144

Query: 665  TLIIVQFLLMGFVETKRYMDFVSPGSQAQYGTFFGIEAALEGSENGYPGGPLFNPLGLAR 486
            TLI+VQ LLMGF ETKRYMDFVSPGSQA+ G+FFG+E+ALEG E GYPGGPL NPLGLAR
Sbjct: 145  TLIVVQLLLMGFAETKRYMDFVSPGSQAKEGSFFGLESALEGLEPGYPGGPLLNPLGLAR 204

Query: 485  DAESARVWKLKEIKNGRLAMMAMLGIFVQANVTHAGPIDNLVKHLSNPLHTTIIQTLAGS 306
            D E+A VWKLKEIKNGRLAM+AM+GIFVQA VTHAGPIDNL++HLSNP H TIIQTLA S
Sbjct: 205  DIENAHVWKLKEIKNGRLAMVAMVGIFVQAAVTHAGPIDNLIEHLSNPWHRTIIQTLANS 264

Query: 305  GS 300
            GS
Sbjct: 265  GS 266


>gb|AFK47516.1| unknown [Lotus japonicus]
          Length = 266

 Score =  343 bits (881), Expect = 4e-92
 Identities = 170/249 (68%), Positives = 195/249 (78%), Gaps = 8/249 (3%)
 Frame = -1

Query: 1022 NKNTYRNPSPF--------VSSPARSSTRFARTCVHAQERPTWLPGLDPPAYLNGTLAGD 867
            N NT  NPSP+         +S A ++ R  + C   Q RPTWLPGLDPPAYL+GTLAGD
Sbjct: 18   NSNTIYNPSPYGGYSWLGPAASRAGTTPRCRQICAAMQPRPTWLPGLDPPAYLDGTLAGD 77

Query: 866  YGFDPLGLGEDPESLKWYVQAELVHARFAMAGVAGIXXXXXXXXXXXXXLPIWYEAGAVK 687
            YGFDPLGLGEDPESL+WYVQAELVHARFAM GV GI             +P+W+EAGAVK
Sbjct: 78   YGFDPLGLGEDPESLRWYVQAELVHARFAMLGVFGILVTDLLRVTGLSKIPVWFEAGAVK 137

Query: 686  FEFASTTTLIIVQFLLMGFVETKRYMDFVSPGSQAQYGTFFGIEAALEGSENGYPGGPLF 507
            +EF +T TLIIVQ LLMGF ETKRYMDF+ PGSQA+ G+FFG+EA+ EG E GYPGGPL 
Sbjct: 138  YEFTNTQTLIIVQLLLMGFAETKRYMDFIGPGSQAKEGSFFGLEASFEGLEPGYPGGPLL 197

Query: 506  NPLGLARDAESARVWKLKEIKNGRLAMMAMLGIFVQANVTHAGPIDNLVKHLSNPLHTTI 327
            NPLGLA+D ++AR  KLKEIKNGRLAM+A+LGIFVQA+VTH GPIDNLV+HLSNP H T+
Sbjct: 198  NPLGLAKDIKNARESKLKEIKNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTV 257

Query: 326  IQTLAGSGS 300
            IQTLA SGS
Sbjct: 258  IQTLASSGS 266


>ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
           vinifera] gi|302142320|emb|CBI19523.3| unnamed protein
           product [Vitis vinifera]
          Length = 264

 Score =  342 bits (877), Expect = 1e-91
 Identities = 169/227 (74%), Positives = 191/227 (84%), Gaps = 2/227 (0%)
 Frame = -1

Query: 980 PARSS-TRFAR-TCVHAQERPTWLPGLDPPAYLNGTLAGDYGFDPLGLGEDPESLKWYVQ 807
           PAR   +RF+  T V AQ+RPTWLPGLDPP YLNGTLAGD+GFDPLGLGEDPE+L+WYVQ
Sbjct: 37  PARPGPSRFSHGTVVQAQQRPTWLPGLDPPPYLNGTLAGDFGFDPLGLGEDPENLRWYVQ 96

Query: 806 AELVHARFAMAGVAGIXXXXXXXXXXXXXLPIWYEAGAVKFEFASTTTLIIVQFLLMGFV 627
           AELVHARFAMAGVAGI             LP+WYEAGAVKFEFAST  L IVQ +LMGFV
Sbjct: 97  AELVHARFAMAGVAGILVTDLLRVTGISNLPVWYEAGAVKFEFASTEALFIVQLILMGFV 156

Query: 626 ETKRYMDFVSPGSQAQYGTFFGIEAALEGSENGYPGGPLFNPLGLARDAESARVWKLKEI 447
           ETKRYMDF +PGSQA+ G+FFG+EAALEG E GYPGGPL NPLGLARD ++A  WKLKEI
Sbjct: 157 ETKRYMDFTNPGSQAKEGSFFGLEAALEGLEPGYPGGPLLNPLGLARDIKNAHDWKLKEI 216

Query: 446 KNGRLAMMAMLGIFVQANVTHAGPIDNLVKHLSNPLHTTIIQTLAGS 306
           KNGRLAM+AMLG+FVQA+VTHAGPI+NLV+HLSNP H TIIQT++ +
Sbjct: 217 KNGRLAMVAMLGVFVQASVTHAGPIENLVEHLSNPWHKTIIQTISST 263


>ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
           [Glycine max]
          Length = 263

 Score =  334 bits (857), Expect = 3e-89
 Identities = 160/226 (70%), Positives = 187/226 (82%)
 Frame = -1

Query: 977 ARSSTRFARTCVHAQERPTWLPGLDPPAYLNGTLAGDYGFDPLGLGEDPESLKWYVQAEL 798
           A ++ R+ +TCV AQ+RPTWLPGLDPP +L+GTLAGD+GFDPLGL EDP SL+WYVQAEL
Sbjct: 38  AAATPRYRQTCVGAQQRPTWLPGLDPPPHLDGTLAGDFGFDPLGLAEDPASLRWYVQAEL 97

Query: 797 VHARFAMAGVAGIXXXXXXXXXXXXXLPIWYEAGAVKFEFASTTTLIIVQFLLMGFVETK 618
           VH RFAM GV GI             +P+W+EAGAVK++FA+T TL +VQ +LMGFVETK
Sbjct: 98  VHCRFAMLGVFGILVTDLLRVTGISKIPVWFEAGAVKYDFANTKTLFLVQLVLMGFVETK 157

Query: 617 RYMDFVSPGSQAQYGTFFGIEAALEGSENGYPGGPLFNPLGLARDAESARVWKLKEIKNG 438
           RYMDFVSPGSQA+ G+FFG+EA+L+G E GYPGGPL NPLGLA+D  +A  WKLKEIKNG
Sbjct: 158 RYMDFVSPGSQAKEGSFFGLEASLKGLEPGYPGGPLLNPLGLAKDINNAHDWKLKEIKNG 217

Query: 437 RLAMMAMLGIFVQANVTHAGPIDNLVKHLSNPLHTTIIQTLAGSGS 300
           RLAM+AMLGIFVQA+VTH GPIDNLV+HLSNP H TIIQTLA S S
Sbjct: 218 RLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLANSSS 263


>ref|XP_003603038.1| Chlorophyll a-b binding protein [Medicago truncatula]
           gi|355492086|gb|AES73289.1| Chlorophyll a-b binding
           protein [Medicago truncatula]
          Length = 267

 Score =  333 bits (854), Expect = 6e-89
 Identities = 163/231 (70%), Positives = 187/231 (80%), Gaps = 4/231 (1%)
 Frame = -1

Query: 980 PARSST----RFARTCVHAQERPTWLPGLDPPAYLNGTLAGDYGFDPLGLGEDPESLKWY 813
           PA + T    R  + C  AQ+RPTWLPGLDPP YL+GTL GD+GFDPLGLGEDPESLKWY
Sbjct: 37  PAAAGTGVTPRCKQICAAAQQRPTWLPGLDPPTYLDGTLPGDFGFDPLGLGEDPESLKWY 96

Query: 812 VQAELVHARFAMAGVAGIXXXXXXXXXXXXXLPIWYEAGAVKFEFASTTTLIIVQFLLMG 633
           VQAELVH+RFAM GV GI             +PIW+EAGAVK+EFA+T TL++VQ LLMG
Sbjct: 97  VQAELVHSRFAMLGVLGILVTDLLRVAGVNSIPIWFEAGAVKYEFANTGTLVVVQLLLMG 156

Query: 632 FVETKRYMDFVSPGSQAQYGTFFGIEAALEGSENGYPGGPLFNPLGLARDAESARVWKLK 453
           + ET+RYMDFVSPGSQA+ G+FFG+EA+L G E GYPGGPL NPLGLA+D +SAR WKLK
Sbjct: 157 YAETRRYMDFVSPGSQAKEGSFFGLEASLGGLEPGYPGGPLLNPLGLAKDIKSAREWKLK 216

Query: 452 EIKNGRLAMMAMLGIFVQANVTHAGPIDNLVKHLSNPLHTTIIQTLAGSGS 300
           EIKNGRLAM+A+LGIFVQA+VTH GPIDNLV+HLSNP H TIIQ LA S S
Sbjct: 217 EIKNGRLAMVAILGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQILASSSS 267


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