BLASTX nr result

ID: Papaver22_contig00013354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00013354
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   189   2e-46
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              189   2e-46
ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...   186   2e-45
ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protei...   185   3e-45
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...   185   3e-45

>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score =  189 bits (481), Expect = 2e-46
 Identities = 106/179 (59%), Positives = 124/179 (69%), Gaps = 1/179 (0%)
 Frame = -2

Query: 535 VGKSLLIDSLAENNLTKLGHFCSSPRVTPSTDSHRITLPVTTTSGKEIRLQFVECPDDIN 356
           VGKSLLI SL ++  TK  H  S  R            P+T  SGK  RLQFVECP+DIN
Sbjct: 97  VGKSLLIKSLVKH-YTK--HNLSEVRG-----------PITIVSGKNRRLQFVECPNDIN 142

Query: 355 GMIDAAKYADVVILMVDASYGFEMETFEFRNLLQVHGFPTVVGVLTHLDKV-DQHKLLKV 179
           GMIDAAK+AD+ +L++D SYGFEMETFEF N+LQVHGFP V+GVLTHLDK  D  KL K 
Sbjct: 143 GMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKT 202

Query: 178 KQRLEDHFCTEISEGAKVFSLCGLEDGLYKMLEIYGLAEMLSDSQFLPLSWRAKHPYVL 2
           KQRL+  F TEI +GAK+F L GL  G Y   EI+ LA  +S  +F PLSWRA HPY+L
Sbjct: 203 KQRLKHRFWTEIYDGAKLFYLSGLVHGKYPKREIHNLARFISVMKFHPLSWRASHPYIL 261


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  189 bits (481), Expect = 2e-46
 Identities = 106/179 (59%), Positives = 124/179 (69%), Gaps = 1/179 (0%)
 Frame = -2

Query: 535 VGKSLLIDSLAENNLTKLGHFCSSPRVTPSTDSHRITLPVTTTSGKEIRLQFVECPDDIN 356
           VGKSLLI SL ++  TK  H  S  R            P+T  SGK  RLQFVECP+DIN
Sbjct: 97  VGKSLLIKSLVKH-YTK--HNLSEVRG-----------PITIVSGKNRRLQFVECPNDIN 142

Query: 355 GMIDAAKYADVVILMVDASYGFEMETFEFRNLLQVHGFPTVVGVLTHLDKV-DQHKLLKV 179
           GMIDAAK+AD+ +L++D SYGFEMETFEF N+LQVHGFP V+GVLTHLDK  D  KL K 
Sbjct: 143 GMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKT 202

Query: 178 KQRLEDHFCTEISEGAKVFSLCGLEDGLYKMLEIYGLAEMLSDSQFLPLSWRAKHPYVL 2
           KQRL+  F TEI +GAK+F L GL  G Y   EI+ LA  +S  +F PLSWRA HPY+L
Sbjct: 203 KQRLKHRFWTEIYDGAKLFYLSGLVHGKYPKREIHNLARFISVMKFHPLSWRASHPYIL 261


>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 825

 Score =  186 bits (472), Expect = 2e-45
 Identities = 101/179 (56%), Positives = 122/179 (68%), Gaps = 1/179 (0%)
 Frame = -2

Query: 535 VGKSLLIDSLAENNLTKLGHFCSSPRVTPSTDSHRITLPVTTTSGKEIRLQFVECPDDIN 356
           VGKSLLI SL +       H+          +   +  P+T  SGK+ R+QFVECP+DIN
Sbjct: 97  VGKSLLIKSLVK-------HYTKH-------NLPEVRGPITIVSGKQRRVQFVECPNDIN 142

Query: 355 GMIDAAKYADVVILMVDASYGFEMETFEFRNLLQVHGFPTVVGVLTHLDKV-DQHKLLKV 179
           GMIDAAK+AD+ +L++D SYGFEMETFEF N+LQVHGFP V+GVLTHLDK  D  KL K 
Sbjct: 143 GMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDVKKLRKT 202

Query: 178 KQRLEDHFCTEISEGAKVFSLCGLEDGLYKMLEIYGLAEMLSDSQFLPLSWRAKHPYVL 2
           KQRL+  F TEI +GAK+F L GL  G Y   EI+ LA  +S  +F PLSWR  HPYVL
Sbjct: 203 KQRLKHRFWTEIYDGAKLFYLSGLIHGKYPRREIHNLARFISVMKFHPLSWRTSHPYVL 261


>ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
           gi|355507882|gb|AES89024.1| Ribosome biogenesis protein
           BMS1-like protein [Medicago truncatula]
          Length = 988

 Score =  185 bits (470), Expect = 3e-45
 Identities = 102/179 (56%), Positives = 122/179 (68%), Gaps = 1/179 (0%)
 Frame = -2

Query: 535 VGKSLLIDSLAENNLTKLGHFCSSPRVTPSTDSHRITLPVTTTSGKEIRLQFVECPDDIN 356
           VGKSLLI SL ++   +     + P V           P+T  SGK+ RLQFVECP+DIN
Sbjct: 94  VGKSLLIKSLIKHYTKQ-----NLPEVRG---------PITIVSGKQRRLQFVECPNDIN 139

Query: 355 GMIDAAKYADVVILMVDASYGFEMETFEFRNLLQVHGFPTVVGVLTHLDKV-DQHKLLKV 179
           GMIDAAKYAD+ +L++D SYGFEMETFEF N+LQVHGFP V+GVLTHLD   D  KL K 
Sbjct: 140 GMIDAAKYADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDGFKDVKKLRKT 199

Query: 178 KQRLEDHFCTEISEGAKVFSLCGLEDGLYKMLEIYGLAEMLSDSQFLPLSWRAKHPYVL 2
           KQRL+  F TEI +GAK+F L GL  G Y   E++ LA  +S  +F PLSWR  HPYVL
Sbjct: 200 KQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVL 258


>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
           gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
           BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score =  185 bits (470), Expect = 3e-45
 Identities = 102/179 (56%), Positives = 122/179 (68%), Gaps = 1/179 (0%)
 Frame = -2

Query: 535 VGKSLLIDSLAENNLTKLGHFCSSPRVTPSTDSHRITLPVTTTSGKEIRLQFVECPDDIN 356
           VGKSLLI SL ++   +     + P V           P+T  SGK+ RLQFVECP+DIN
Sbjct: 94  VGKSLLIKSLIKHYTKQ-----NLPEVRG---------PITIVSGKQRRLQFVECPNDIN 139

Query: 355 GMIDAAKYADVVILMVDASYGFEMETFEFRNLLQVHGFPTVVGVLTHLDKV-DQHKLLKV 179
           GMIDAAKYAD+ +L++D SYGFEMETFEF N+LQVHGFP V+GVLTHLD   D  KL K 
Sbjct: 140 GMIDAAKYADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDGFKDVKKLRKT 199

Query: 178 KQRLEDHFCTEISEGAKVFSLCGLEDGLYKMLEIYGLAEMLSDSQFLPLSWRAKHPYVL 2
           KQRL+  F TEI +GAK+F L GL  G Y   E++ LA  +S  +F PLSWR  HPYVL
Sbjct: 200 KQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVL 258


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