BLASTX nr result

ID: Papaver22_contig00010634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00010634
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40586.3| unnamed protein product [Vitis vinifera]              131   9e-29
ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III s...   131   9e-29
ref|XP_002454492.1| hypothetical protein SORBIDRAFT_04g032090 [S...   131   1e-28
ref|NP_001047708.1| Os02g0672700 [Oryza sativa Japonica Group] g...   127   2e-27
ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III s...   126   3e-27

>emb|CBI40586.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  131 bits (330), Expect = 9e-29
 Identities = 64/112 (57%), Positives = 76/112 (67%), Gaps = 2/112 (1%)
 Frame = +3

Query: 174 MEFCPTCGNMLKFDPSSVGFKAGLRCPTCPYVAQIEPQVKLKKRQPLVKKQIEPIFSGAH 353
           MEFCPTCGN L+++   +G  A   CPTCPYV  IE +VK+K++Q LVKK+IEPIFS   
Sbjct: 65  MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFS-KD 123

Query: 354 AMAVAPKTQAQCPSCMHGEAYFQEFQTRSADEPMTRFYECC--KCSRHWRED 503
            M   P T A CP C  G+A FQ+ QTRSADEPM+ FY C    C R WRED
Sbjct: 124 DMKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRED 175


>ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Vitis vinifera]
          Length = 111

 Score =  131 bits (330), Expect = 9e-29
 Identities = 64/112 (57%), Positives = 76/112 (67%), Gaps = 2/112 (1%)
 Frame = +3

Query: 174 MEFCPTCGNMLKFDPSSVGFKAGLRCPTCPYVAQIEPQVKLKKRQPLVKKQIEPIFSGAH 353
           MEFCPTCGN L+++   +G  A   CPTCPYV  IE +VK+K++Q LVKK+IEPIFS   
Sbjct: 1   MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIFS-KD 59

Query: 354 AMAVAPKTQAQCPSCMHGEAYFQEFQTRSADEPMTRFYECC--KCSRHWRED 503
            M   P T A CP C  G+A FQ+ QTRSADEPM+ FY C    C R WRED
Sbjct: 60  DMKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWRED 111


>ref|XP_002454492.1| hypothetical protein SORBIDRAFT_04g032090 [Sorghum bicolor]
           gi|241934323|gb|EES07468.1| hypothetical protein
           SORBIDRAFT_04g032090 [Sorghum bicolor]
          Length = 166

 Score =  131 bits (329), Expect = 1e-28
 Identities = 62/119 (52%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
 Frame = +3

Query: 153 ESGSSKGMEFCPTCGNMLKFDPSSVGFKAGLRCPTCPYVAQIEPQVKLKKRQPLVKKQIE 332
           + G  + MEFCP CG +L+ DP +   +  L C  CPYV  I  Q K+ K+  LVKK++E
Sbjct: 50  KGGRGRAMEFCPVCGMLLQIDPGTASHRLRLFCSVCPYVCPI--QNKIVKKARLVKKEVE 107

Query: 333 PIFSGAHAMAVAPKTQAQCPSCMHGEAYFQEFQTRSADEPMTRFYECCK--CSRHWRED 503
           PIFS A  M  APKT   C  C HGEAYF++ Q RSADEPMT  Y CCK  C   WRED
Sbjct: 108 PIFSTADEMKSAPKTAVTCQRCNHGEAYFKQMQIRSADEPMTTIYRCCKEECQHEWRED 166


>ref|NP_001047708.1| Os02g0672700 [Oryza sativa Japonica Group]
           gi|50251233|dbj|BAD27819.1| putative DNA-directed RNA
           polymerase III [Oryza sativa Japonica Group]
           gi|50251924|dbj|BAD27861.1| putative DNA-directed RNA
           polymerase II [Oryza sativa Japonica Group]
           gi|113537239|dbj|BAF09622.1| Os02g0672700 [Oryza sativa
           Japonica Group] gi|215708708|dbj|BAG93977.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215765354|dbj|BAG87051.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 110

 Score =  127 bits (319), Expect = 2e-27
 Identities = 58/112 (51%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
 Frame = +3

Query: 174 MEFCPTCGNMLKFDPSSVGFKAGLRCPTCPYVAQIEPQVKLKKRQPLVKKQIEPIFSGAH 353
           MEFCP CG +L+  P++ G +    CPTCPYV  ++ ++  K R  LVKK++EPIFS + 
Sbjct: 1   MEFCPGCGMLLQIQPATGGNRLRFYCPTCPYVCPVKNKIVKKAR--LVKKEVEPIFSDSD 58

Query: 354 AMAVAPKTQAQCPSCMHGEAYFQEFQTRSADEPMTRFYECCK--CSRHWRED 503
           AM  APKT   CP C +GEAY+++ Q RSADEPM+ FY+CC+  C   WRED
Sbjct: 59  AMKNAPKTTTTCPRCQNGEAYYRQMQIRSADEPMSTFYKCCREECQFDWRED 110


>ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Glycine max]
          Length = 111

 Score =  126 bits (317), Expect = 3e-27
 Identities = 60/111 (54%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
 Frame = +3

Query: 174 MEFCPTCGNMLKFDPSSVGFKAGLRCPTCPYVAQIEPQVKLKKRQPLVKKQIEPIFSGAH 353
           MEFCP+CGNML+++   +G  +   C  CPYV  IE +V++K++Q LV+K+IEPIFS   
Sbjct: 1   MEFCPSCGNMLQYELPYMGRPSRFFCSACPYVCHIENRVEIKRKQRLVRKEIEPIFS-ED 59

Query: 354 AMAVAPKTQAQCPSCMHGEAYFQEFQTRSADEPMTRFYECCK--CSRHWRE 500
            M  AP T+A CP C HG+A F+EFQTRSADEP T FY+C    C + WRE
Sbjct: 60  DMTNAPSTEATCPFCGHGKAAFKEFQTRSADEPATLFYKCLNNDCKKQWRE 110


Top