BLASTX nr result

ID: Papaver22_contig00009395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00009395
         (1467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629127.1| F-box family protein [Medicago truncatula] g...    75   4e-11
ref|XP_003611132.1| S-locus F-box protein [Medicago truncatula] ...    74   1e-10
ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ...    73   2e-10
ref|XP_003622917.1| F-box protein [Medicago truncatula] gi|35549...    72   3e-10
ref|XP_003614662.1| F-box protein [Medicago truncatula] gi|35551...    72   4e-10

>ref|XP_003629127.1| F-box family protein [Medicago truncatula]
            gi|355523149|gb|AET03603.1| F-box family protein
            [Medicago truncatula]
          Length = 234

 Score = 75.1 bits (183), Expect = 4e-11
 Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 6/203 (2%)
 Frame = +3

Query: 717  SKNVNDHPPPHLPEELIFDSILTKLPARSLALCSCASKLWYNSIYNDARFASSHFVQNQN 896
            S +++  P P LP +LI D IL +LP + L    C  K W NS+ +D +FA  H   +  
Sbjct: 19   SSSLHTPPLPFLPFDLITD-ILCRLPVKFLIQFQCVCKSW-NSLISDPKFAEKHCRLSTT 76

Query: 897  RLSLVFNLLNVPEGDTEKVY-IFSLEKGAVNDDYFSYISLFDFQLKNEL--VGYCNGLAC 1067
            RL       N+P     K Y + S+      +     I+  +   K     VG CNG+ C
Sbjct: 77   RLVHTLTFSNLPYKHILKSYPLHSVFIDLTTNQTAHPITQLETPSKYYFYFVGSCNGILC 136

Query: 1068 VKVAPEHVGTVGAITVFNPIRGESLVLSYLAPGGYIHLCHGFGFDSSSHKYKAVIIFT-- 1241
            + +A ++ G V +I ++NP   +   L YL     +   +GFG+D+ ++ YK V++    
Sbjct: 137  L-LACDYAGFV-SIRLWNPSIRKFKELPYLQKQEGV--MYGFGYDAVTNNYKVVVVLRAC 192

Query: 1242 -SKGNDEFVCMVFTLGTNSWRKL 1307
             S GN  F   V+TL T+SW+ L
Sbjct: 193  YSSGNS-FEVNVYTLSTDSWKSL 214


>ref|XP_003611132.1| S-locus F-box protein [Medicago truncatula]
            gi|355512467|gb|AES94090.1| S-locus F-box protein
            [Medicago truncatula]
          Length = 464

 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
 Frame = +3

Query: 642  QKKKGTVKKRKDFYGEQNKRTIVKKSKNVNDHPPPHLPEELIFDSILTKLPARSLALCSC 821
            ++KKG++   +      + ++  ++     D+ P HL  E     IL KLP +SL +C C
Sbjct: 2    KRKKGSITPPRATIQRCSNKSESQQLCPYFDNLPFHLTTE-----ILLKLPIKSLLICRC 56

Query: 822  ASKLWYNSIYNDARFASSHF------VQNQNRLSLVFNLL---NVPEGDTEKVYIFSLEK 974
              K+W N++ ++ +FA   F        N  +L  +F L    ++   D   V ++ + K
Sbjct: 57   VCKIW-NTLISEPKFAKLQFERFEFGTNNLVKLKPIFELPLCDDISSMDKNDVKLYKVIK 115

Query: 975  GAVNDDYFSYISLFDFQLKNELVGYCNGLACVKVAPEHVGTVGAITVFNPIRGESLVLSY 1154
                  Y +  S  D   K  +V  CNGL C+        T   + + NP+  E  +L  
Sbjct: 116  NKSKKRYITCTSSTD---KFGIVNSCNGLLCL----SETSTGSPLAICNPVTREFTILPE 168

Query: 1155 LAPG----GYIHLCHGFGFDSSSHKYKAVIIFTS---KGND----EFVCMVFTLGTNSWR 1301
            L           +  GFGF   +++YK +I++     + ND      V  + TLGT SWR
Sbjct: 169  LTTTSDWFNSARVQAGFGFQPKTNEYKVIIMWNKHVRRANDLVFERLVLEIHTLGTTSWR 228

Query: 1302 KL 1307
             L
Sbjct: 229  NL 230


>ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 369

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 62/195 (31%), Positives = 84/195 (43%), Gaps = 6/195 (3%)
 Frame = +3

Query: 741  PPHLPEELIFDSILTKLPARSLALCSCASKLWYNSIYNDARFASSHFVQNQNRLSLVFNL 920
            PP LP E+I D IL++LP + L    C  + W   I +D  FA  H  +     ++  + 
Sbjct: 5    PPQLPFEIIID-ILSRLPVKHLIQFKCVCRTWQYLISSDPEFAKLHLERVLQVTNVHLHR 63

Query: 921  LNVPEGDTEKVYIFSLEKGAVNDDYFSYISLFDFQLKN------ELVGYCNGLACVKVAP 1082
            L +     + V    +E     DD F  I    F ++N      E VG CNGL       
Sbjct: 64   LLLSADPFQSV---DMEAYCDADDNF-LIREHRFPVRNPEDDDFEFVGSCNGLISAVFGS 119

Query: 1083 EHVGTVGAITVFNPIRGESLVLSYLAPGGYIHLCHGFGFDSSSHKYKAVIIFTSKGNDEF 1262
            +H      ITV+NP  GES  L          L +GFG+DS    YK V   +S   +E 
Sbjct: 120  DH-----EITVWNPSTGESRKLPAPTSSTEDKLFYGFGYDSKLDDYKIVRGASSASCNEV 174

Query: 1263 VCMVFTLGTNSWRKL 1307
               VF L  N WR +
Sbjct: 175  QMEVFNLKGNRWRAI 189


>ref|XP_003622917.1| F-box protein [Medicago truncatula] gi|355497932|gb|AES79135.1| F-box
            protein [Medicago truncatula]
          Length = 720

 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
 Frame = +3

Query: 738  PPPHLPEELIFDSILTKLPARSLALCSCASKLWYNSIYNDARFASSHFVQNQNRLSLVFN 917
            PP  LP+ELI + +L++   +SL    C SK W NS+ +D RF   H  Q+     L  +
Sbjct: 22   PPSVLPDELITE-VLSRGDVKSLMRMKCVSKYW-NSMISDPRFVKLHMKQSARNAHLTLS 79

Query: 918  LLNVPEGDTEKVYIFS----LEKGAVNDDYFSYISLFDFQLKNELVGYCNGLACVKVAPE 1085
            L          V  +     +E G +      Y  L D + +  ++G CNG  C+ +   
Sbjct: 80   LCKSGIDGDNNVVPYPVRGLIENGLITLPSDPYYRLRDKECQY-VIGSCNGWLCL-LGFS 137

Query: 1086 HVGTVGAI--TVFNPIRGE-SLVLSYLAP---GGYIHLCHGFGFDSSSHKYKAVIIFTSK 1247
             +G    I    +NP  G+ +  L Y+     G Y H    FG+D SS  YK V++   +
Sbjct: 138  SIGAYRHIWFRFWNPAMGKMTQKLGYICDNVLGLYTHFKFAFGYDVSSDTYKVVLLILDE 197

Query: 1248 GNDEFVCMVFTLGTNSWRKL 1307
              +    +V +LG N WR +
Sbjct: 198  ARNRSNVLVMSLGNNLWRAI 217


>ref|XP_003614662.1| F-box protein [Medicago truncatula] gi|355515997|gb|AES97620.1| F-box
            protein [Medicago truncatula]
          Length = 347

 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 2/202 (0%)
 Frame = +3

Query: 717  SKNVNDHPPPHLPEELIFDSILTKLPARSLALCSCASKLWYNSIYNDARFASSHFVQNQN 896
            S +++  P P +P +LI   IL +LP + L    C  K W+NS+ +D +FA  HF  +  
Sbjct: 35   SSSLHSSPLPTIPFDLI-PEILYRLPVKPLMQFRCVCK-WWNSLISDPKFAKKHFRFSTT 92

Query: 897  RLSLVFNLLNVPEGDTEKVYIFSLEKGAVNDDYFSYISLFDFQLKNE--LVGYCNGLACV 1070
             L  +    ++ +  T K Y   L+     D     I+  +    +   +VG CNG+ CV
Sbjct: 93   CLIHILTYSSLSQKYTIKSY--PLDSLFTKDVACKKIAQHEIPSNHAVYIVGSCNGIICV 150

Query: 1071 KVAPEHVGTVGAITVFNPIRGESLVLSYLAPGGYIHLCHGFGFDSSSHKYKAVIIFTSKG 1250
              A  H+  +             L    L   GYI   HGFG D  S  YK V++F    
Sbjct: 151  --AEYHIKFI------------QLPPLELQLNGYILQMHGFGHDPISDNYKVVVVFLDNN 196

Query: 1251 NDEFVCMVFTLGTNSWRKLTTT 1316
              + V +V  +GTN W+ +  T
Sbjct: 197  RTD-VKVVHNVGTNFWKDIIET 217


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