BLASTX nr result

ID: Papaver22_contig00009003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00009003
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17841.3| unnamed protein product [Vitis vinifera]              101   1e-19
ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subu...    97   2e-18
emb|CAJ13715.1| putative replication factor A [Capsicum chinense]      88   1e-15
ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [V...    85   9e-15
ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subu...    85   1e-14

>emb|CBI17841.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  101 bits (251), Expect = 1e-19
 Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
 Frame = +3

Query: 3   HNTKSQGQGSNPAQPQTTSAAITNGSSSYHTAPSNQFHGQPNS--VGIGQKIVDYMTIPA 176
           +NTKS+ Q   P Q   T+ AI      Y  +  NQF GQ  +   G+ Q ++DY+  P 
Sbjct: 166 YNTKSRVQAGGPTQSHVTNPAIGTPLKGYQASQPNQFSGQYGAGLKGVDQLVIDYLQQPQ 225

Query: 177 NMAREQGVSMQELAQHLKVPLEKIRGAMQHLEEDGLAYSTIDEFHYKSSTN 329
           ++AR+QGV   ELAQ L VP++KI  +++ LEE+GL YSTIDE+HYKS+ N
Sbjct: 226 SLARDQGVGRDELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKSTGN 276


>ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
          Length = 275

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
 Frame = +3

Query: 3   HNTKSQGQGSNPAQPQTTSAAITNGSSSYHTAPSNQFHGQPNS--VGIGQKIVDYMTIPA 176
           +NTKS+  G  P Q   T+ AI      Y  +  NQF GQ  +   G+ Q ++DY+  P 
Sbjct: 166 YNTKSRAGG--PTQSHVTNPAIGTPLKGYQASQPNQFSGQYGAGLKGVDQLVIDYLQQPQ 223

Query: 177 NMAREQGVSMQELAQHLKVPLEKIRGAMQHLEEDGLAYSTIDEFHYKSSTN 329
           ++AR+QGV   ELAQ L VP++KI  +++ LEE+GL YSTIDE+HYKS+ N
Sbjct: 224 SLARDQGVGRDELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKSTGN 274


>emb|CAJ13715.1| putative replication factor A [Capsicum chinense]
          Length = 299

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 50/106 (47%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
 Frame = +3

Query: 24  QGSNPAQPQTTSAAITNGSSSYHTAPSNQFHGQPNSVGIG---QKIVDYMTIPANMAREQ 194
           Q S+    Q  S++       Y  + SNQF G  N  GIG   + ++DY+  P+ +A E+
Sbjct: 195 QDSSFMSAQVPSSSFNTPLKGYQASASNQFPGF-NMDGIGGVHKMVLDYLQQPSCLALEK 253

Query: 195 GVSMQELAQHLKVPLEKIRGAMQHLEEDGLAYSTIDEFHYKSSTNA 332
           GV   ELAQ L+VP EKI GAM+ LE +GL YSTID+FHYKS+ NA
Sbjct: 254 GVHRNELAQQLRVPSEKIMGAMEALESEGLVYSTIDDFHYKSTGNA 299


>ref|XP_002282796.1| PREDICTED: replication factor A protein 2 [Vitis vinifera]
           gi|296081770|emb|CBI20775.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 47/111 (42%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
 Frame = +3

Query: 3   HNTKSQGQGSNPAQPQTTSAAITNGSSSYHTAPSNQFHGQP--NSVGIGQKIVDYMTIPA 176
           H   S+ +  + A  Q  SA++   S+ Y T PS+Q   Q      G+ Q ++DY+  P+
Sbjct: 158 HLKNSKTRLPSDALTQPLSASVKTESTGYQT-PSSQLSAQSVDGVKGLDQMVLDYLQQPS 216

Query: 177 NMAREQGVSMQELAQHLKVPLEKIRGAMQHLEEDGLAYSTIDEFHYKSSTN 329
           N  RE+G+   EL+Q LK+  EKI  +++ LEE+GL YSTIDEFHYKS+T+
Sbjct: 217 NYDREKGIHRDELSQQLKISTEKIMESIRTLEEEGLIYSTIDEFHYKSTTS 267


>ref|XP_004136317.1| PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis
           sativus] gi|449519474|ref|XP_004166760.1| PREDICTED:
           replication protein A 32 kDa subunit A-like [Cucumis
           sativus]
          Length = 271

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 44/114 (38%), Positives = 74/114 (64%), Gaps = 8/114 (7%)
 Frame = +3

Query: 6   NTKSQG-QGSNPAQPQTTSAAIT----NGSSSYHTAPS---NQFHGQPNSVGIGQKIVDY 161
           N+K Q  +G+   Q QT+ + +     NGS+ YHT  S   ++ H         + ++DY
Sbjct: 157 NSKLQNLKGNGSTQLQTSDSIVKTPVQNGSNGYHTTSSAIPSEQHTVDVKKSCDELVLDY 216

Query: 162 MTIPANMAREQGVSMQELAQHLKVPLEKIRGAMQHLEEDGLAYSTIDEFHYKSS 323
           + +P+++A+E+G+   EL+Q LK+P+EKI  +++ LE++GL YSTIDEFH+KS+
Sbjct: 217 LQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKSA 270


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