BLASTX nr result

ID: Papaver22_contig00008599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00008599
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17233.3| unnamed protein product [Vitis vinifera]               84   1e-36
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...    84   1e-36
ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...    86   5e-36
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-34
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...    77   2e-33

>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score = 84.3 bits (207), Expect(3) = 1e-36
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = +2

Query: 107 QNIISYGYV*GCHIKKGTKVHIAGVGDFSLAGVTSLADPCPLPSAAKK 250
           +NI  YGY+ GC++KKGTKVHIAGVGD SLAGVT LADPCPLPSAAKK
Sbjct: 282 RNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSAAKK 329



 Score = 68.9 bits (167), Expect(3) = 1e-36
 Identities = 35/55 (63%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
 Frame = +3

Query: 243 QKNGLLDKEKLVYAPIAGLRDLLYDKDAVYVEIPDNSVQFSNV-DANGKAV*KGE 404
           +K GL D++KL YAP++GL DLLYDKDAVY+ I D+ VQFSNV D NG A  KG+
Sbjct: 328 KKKGLRDRDKLFYAPMSGLGDLLYDKDAVYININDHLVQFSNVDDENGGAARKGK 382



 Score = 45.4 bits (106), Expect(3) = 1e-36
 Identities = 18/26 (69%), Positives = 24/26 (92%)
 Frame = +1

Query: 1   VSVMQCHPLSWRAAHLYVLVNRFEDL 78
           +SVM+ HPLSWRA+H Y+LV+RFED+
Sbjct: 243 ISVMKFHPLSWRASHPYILVDRFEDV 268


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score = 84.3 bits (207), Expect(3) = 1e-36
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = +2

Query: 107 QNIISYGYV*GCHIKKGTKVHIAGVGDFSLAGVTSLADPCPLPSAAKK 250
           +NI  YGY+ GC++KKGTKVHIAGVGD SLAGVT LADPCPLPSAAKK
Sbjct: 282 RNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSAAKK 329



 Score = 68.9 bits (167), Expect(3) = 1e-36
 Identities = 35/55 (63%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
 Frame = +3

Query: 243 QKNGLLDKEKLVYAPIAGLRDLLYDKDAVYVEIPDNSVQFSNV-DANGKAV*KGE 404
           +K GL D++KL YAP++GL DLLYDKDAVY+ I D+ VQFSNV D NG A  KG+
Sbjct: 328 KKKGLRDRDKLFYAPMSGLGDLLYDKDAVYININDHLVQFSNVDDENGGAARKGK 382



 Score = 45.4 bits (106), Expect(3) = 1e-36
 Identities = 18/26 (69%), Positives = 24/26 (92%)
 Frame = +1

Query: 1   VSVMQCHPLSWRAAHLYVLVNRFEDL 78
           +SVM+ HPLSWRA+H Y+LV+RFED+
Sbjct: 243 ISVMKFHPLSWRASHPYILVDRFEDV 268


>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 825

 Score = 85.9 bits (211), Expect(3) = 5e-36
 Identities = 38/48 (79%), Positives = 45/48 (93%)
 Frame = +2

Query: 107 QNIISYGYV*GCHIKKGTKVHIAGVGDFSLAGVTSLADPCPLPSAAKK 250
           +N+  YGY+ GC++KKGTKVHIAGVGD+SLAGVT+LADPCPLPSAAKK
Sbjct: 282 RNVTLYGYLRGCNLKKGTKVHIAGVGDYSLAGVTALADPCPLPSAAKK 329



 Score = 65.9 bits (159), Expect(3) = 5e-36
 Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
 Frame = +3

Query: 243 QKNGLLDKEKLVYAPIAGLRDLLYDKDAVYVEIPDNSVQFSNV-DANGKAV*KGETE 410
           +K GL DKEKL YAP++G+ DLLYDKDAVY+ I D+ VQFS V D NG    KG+ +
Sbjct: 328 KKKGLRDKEKLFYAPMSGVGDLLYDKDAVYININDHFVQFSKVDDENGGTKQKGKED 384



 Score = 45.1 bits (105), Expect(3) = 5e-36
 Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
 Frame = +1

Query: 1   VSVMQCHPLSWRAAHLYVLVNRFEDLA--KECTWTKKTEHN 117
           +SVM+ HPLSWR +H YVLV+RFED+   ++    +K++ N
Sbjct: 243 ISVMKFHPLSWRTSHPYVLVDRFEDVTPPEQVHMNRKSDRN 283


>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
           predicted protein [Populus trichocarpa]
          Length = 1181

 Score = 84.0 bits (206), Expect(3) = 1e-34
 Identities = 37/48 (77%), Positives = 45/48 (93%)
 Frame = +2

Query: 107 QNIISYGYV*GCHIKKGTKVHIAGVGDFSLAGVTSLADPCPLPSAAKK 250
           +NI  YGY+ GC++K+GTKVHIAGVGD++LAGVT+LADPCPLPSAAKK
Sbjct: 279 RNITLYGYLRGCNLKRGTKVHIAGVGDYNLAGVTALADPCPLPSAAKK 326



 Score = 65.5 bits (158), Expect(3) = 1e-34
 Identities = 30/44 (68%), Positives = 37/44 (84%)
 Frame = +3

Query: 243 QKNGLLDKEKLVYAPIAGLRDLLYDKDAVYVEIPDNSVQFSNVD 374
           +K GL DKEKL YAP++GL DL+YDKDAVY+ I D+ VQ+SNVD
Sbjct: 325 KKKGLRDKEKLFYAPMSGLGDLVYDKDAVYININDHFVQYSNVD 368



 Score = 42.7 bits (99), Expect(3) = 1e-34
 Identities = 17/26 (65%), Positives = 22/26 (84%)
 Frame = +1

Query: 1   VSVMQCHPLSWRAAHLYVLVNRFEDL 78
           +SVM+ HPLSWR +H YVL +RFED+
Sbjct: 240 ISVMKFHPLSWRTSHPYVLADRFEDV 265


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score = 77.0 bits (188), Expect(3) = 2e-33
 Identities = 33/48 (68%), Positives = 41/48 (85%)
 Frame = +2

Query: 107 QNIISYGYV*GCHIKKGTKVHIAGVGDFSLAGVTSLADPCPLPSAAKK 250
           + +  YGY+ GC++K G KVHIAGVGD+SLAG+T+L DPCPLPSAAKK
Sbjct: 284 RKVTLYGYLRGCNLKMGNKVHIAGVGDYSLAGITALPDPCPLPSAAKK 331



 Score = 66.6 bits (161), Expect(3) = 2e-33
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = +3

Query: 243 QKNGLLDKEKLVYAPIAGLRDLLYDKDAVYVEIPDNSVQFSNVDANGKAV 392
           +K GL DKEKL YAP++GL DLLYDKDAVY+ I D+ VQFS VD    A+
Sbjct: 330 KKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININDHLVQFSKVDDENSAM 379



 Score = 44.3 bits (103), Expect(3) = 2e-33
 Identities = 17/26 (65%), Positives = 23/26 (88%)
 Frame = +1

Query: 1   VSVMQCHPLSWRAAHLYVLVNRFEDL 78
           +SVM+ HPLSWR +H YV+V+RFED+
Sbjct: 245 ISVMKFHPLSWRTSHSYVMVDRFEDI 270


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