BLASTX nr result
ID: Papaver22_contig00008599
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver22_contig00008599 (481 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI17233.3| unnamed protein product [Vitis vinifera] 84 1e-36 ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ... 84 1e-36 ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [... 86 5e-36 ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2... 84 1e-34 ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ... 77 2e-33 >emb|CBI17233.3| unnamed protein product [Vitis vinifera] Length = 1305 Score = 84.3 bits (207), Expect(3) = 1e-36 Identities = 39/48 (81%), Positives = 43/48 (89%) Frame = +2 Query: 107 QNIISYGYV*GCHIKKGTKVHIAGVGDFSLAGVTSLADPCPLPSAAKK 250 +NI YGY+ GC++KKGTKVHIAGVGD SLAGVT LADPCPLPSAAKK Sbjct: 282 RNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSAAKK 329 Score = 68.9 bits (167), Expect(3) = 1e-36 Identities = 35/55 (63%), Positives = 43/55 (78%), Gaps = 1/55 (1%) Frame = +3 Query: 243 QKNGLLDKEKLVYAPIAGLRDLLYDKDAVYVEIPDNSVQFSNV-DANGKAV*KGE 404 +K GL D++KL YAP++GL DLLYDKDAVY+ I D+ VQFSNV D NG A KG+ Sbjct: 328 KKKGLRDRDKLFYAPMSGLGDLLYDKDAVYININDHLVQFSNVDDENGGAARKGK 382 Score = 45.4 bits (106), Expect(3) = 1e-36 Identities = 18/26 (69%), Positives = 24/26 (92%) Frame = +1 Query: 1 VSVMQCHPLSWRAAHLYVLVNRFEDL 78 +SVM+ HPLSWRA+H Y+LV+RFED+ Sbjct: 243 ISVMKFHPLSWRASHPYILVDRFEDV 268 >ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera] Length = 1139 Score = 84.3 bits (207), Expect(3) = 1e-36 Identities = 39/48 (81%), Positives = 43/48 (89%) Frame = +2 Query: 107 QNIISYGYV*GCHIKKGTKVHIAGVGDFSLAGVTSLADPCPLPSAAKK 250 +NI YGY+ GC++KKGTKVHIAGVGD SLAGVT LADPCPLPSAAKK Sbjct: 282 RNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSAAKK 329 Score = 68.9 bits (167), Expect(3) = 1e-36 Identities = 35/55 (63%), Positives = 43/55 (78%), Gaps = 1/55 (1%) Frame = +3 Query: 243 QKNGLLDKEKLVYAPIAGLRDLLYDKDAVYVEIPDNSVQFSNV-DANGKAV*KGE 404 +K GL D++KL YAP++GL DLLYDKDAVY+ I D+ VQFSNV D NG A KG+ Sbjct: 328 KKKGLRDRDKLFYAPMSGLGDLLYDKDAVYININDHLVQFSNVDDENGGAARKGK 382 Score = 45.4 bits (106), Expect(3) = 1e-36 Identities = 18/26 (69%), Positives = 24/26 (92%) Frame = +1 Query: 1 VSVMQCHPLSWRAAHLYVLVNRFEDL 78 +SVM+ HPLSWRA+H Y+LV+RFED+ Sbjct: 243 ISVMKFHPLSWRASHPYILVDRFEDV 268 >ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis] gi|223543572|gb|EEF45102.1| ribosome biogenesis protein bms1, putative [Ricinus communis] Length = 825 Score = 85.9 bits (211), Expect(3) = 5e-36 Identities = 38/48 (79%), Positives = 45/48 (93%) Frame = +2 Query: 107 QNIISYGYV*GCHIKKGTKVHIAGVGDFSLAGVTSLADPCPLPSAAKK 250 +N+ YGY+ GC++KKGTKVHIAGVGD+SLAGVT+LADPCPLPSAAKK Sbjct: 282 RNVTLYGYLRGCNLKKGTKVHIAGVGDYSLAGVTALADPCPLPSAAKK 329 Score = 65.9 bits (159), Expect(3) = 5e-36 Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 1/57 (1%) Frame = +3 Query: 243 QKNGLLDKEKLVYAPIAGLRDLLYDKDAVYVEIPDNSVQFSNV-DANGKAV*KGETE 410 +K GL DKEKL YAP++G+ DLLYDKDAVY+ I D+ VQFS V D NG KG+ + Sbjct: 328 KKKGLRDKEKLFYAPMSGVGDLLYDKDAVYININDHFVQFSKVDDENGGTKQKGKED 384 Score = 45.1 bits (105), Expect(3) = 5e-36 Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 2/41 (4%) Frame = +1 Query: 1 VSVMQCHPLSWRAAHLYVLVNRFEDLA--KECTWTKKTEHN 117 +SVM+ HPLSWR +H YVLV+RFED+ ++ +K++ N Sbjct: 243 ISVMKFHPLSWRTSHPYVLVDRFEDVTPPEQVHMNRKSDRN 283 >ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1| predicted protein [Populus trichocarpa] Length = 1181 Score = 84.0 bits (206), Expect(3) = 1e-34 Identities = 37/48 (77%), Positives = 45/48 (93%) Frame = +2 Query: 107 QNIISYGYV*GCHIKKGTKVHIAGVGDFSLAGVTSLADPCPLPSAAKK 250 +NI YGY+ GC++K+GTKVHIAGVGD++LAGVT+LADPCPLPSAAKK Sbjct: 279 RNITLYGYLRGCNLKRGTKVHIAGVGDYNLAGVTALADPCPLPSAAKK 326 Score = 65.5 bits (158), Expect(3) = 1e-34 Identities = 30/44 (68%), Positives = 37/44 (84%) Frame = +3 Query: 243 QKNGLLDKEKLVYAPIAGLRDLLYDKDAVYVEIPDNSVQFSNVD 374 +K GL DKEKL YAP++GL DL+YDKDAVY+ I D+ VQ+SNVD Sbjct: 325 KKKGLRDKEKLFYAPMSGLGDLVYDKDAVYININDHFVQYSNVD 368 Score = 42.7 bits (99), Expect(3) = 1e-34 Identities = 17/26 (65%), Positives = 22/26 (84%) Frame = +1 Query: 1 VSVMQCHPLSWRAAHLYVLVNRFEDL 78 +SVM+ HPLSWR +H YVL +RFED+ Sbjct: 240 ISVMKFHPLSWRTSHPYVLADRFEDV 265 >ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max] Length = 1181 Score = 77.0 bits (188), Expect(3) = 2e-33 Identities = 33/48 (68%), Positives = 41/48 (85%) Frame = +2 Query: 107 QNIISYGYV*GCHIKKGTKVHIAGVGDFSLAGVTSLADPCPLPSAAKK 250 + + YGY+ GC++K G KVHIAGVGD+SLAG+T+L DPCPLPSAAKK Sbjct: 284 RKVTLYGYLRGCNLKMGNKVHIAGVGDYSLAGITALPDPCPLPSAAKK 331 Score = 66.6 bits (161), Expect(3) = 2e-33 Identities = 32/50 (64%), Positives = 38/50 (76%) Frame = +3 Query: 243 QKNGLLDKEKLVYAPIAGLRDLLYDKDAVYVEIPDNSVQFSNVDANGKAV 392 +K GL DKEKL YAP++GL DLLYDKDAVY+ I D+ VQFS VD A+ Sbjct: 330 KKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININDHLVQFSKVDDENSAM 379 Score = 44.3 bits (103), Expect(3) = 2e-33 Identities = 17/26 (65%), Positives = 23/26 (88%) Frame = +1 Query: 1 VSVMQCHPLSWRAAHLYVLVNRFEDL 78 +SVM+ HPLSWR +H YV+V+RFED+ Sbjct: 245 ISVMKFHPLSWRTSHSYVMVDRFEDI 270