BLASTX nr result
ID: Papaver22_contig00008473
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00008473
(1347 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002798051.1| ribosome biogenesis protein BMS1 [Paracoccid... 367 4e-99
ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [... 319 9e-85
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ... 317 3e-84
emb|CBI17233.3| unnamed protein product [Vitis vinifera] 317 3e-84
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2... 315 2e-83
>ref|XP_002798051.1| ribosome biogenesis protein BMS1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280701|gb|EEH36267.1| ribosome biogenesis protein
BMS1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 759
Score = 367 bits (942), Expect = 4e-99
Identities = 202/486 (41%), Positives = 279/486 (57%), Gaps = 41/486 (8%)
Frame = -2
Query: 1346 PPKVGKSILIKSLIKHFLEQNPDHKRGPNTVLTGNRRRIQFVECPNN-MNGMIDAAKYAD 1170
PP VGK+ L+KSLIK + +Q GP TV+T RRR+ F+ECP++ + MID AK AD
Sbjct: 84 PPGVGKTTLVKSLIKRYTKQTLSSPAGPLTVVTSKRRRLTFLECPSDSLASMIDVAKIAD 143
Query: 1169 AVILITDANYGYEMETFEYLNLLQVHGMP-KVMGALTYLDKIKDANARTLTKRRLMDRFR 993
V+L+ D NYG+EMET E+LN L GMP V G LT+LD K + K+RL RF
Sbjct: 144 IVLLMIDGNYGFEMETMEFLNSLSASGMPGNVFGILTHLDLFKKQSTLRQAKKRLKHRFW 203
Query: 992 DNIHKKARVFYLSGLLHGMYKNDEIRKLANFLSVMEF-HTSSWRAAHPYLLVDHFKDVTS 816
+++ A++FYLSG+++G Y + EI L+ FLSVM+ WR +HPY L D F D+T+
Sbjct: 204 SELYQGAKLFYLSGVINGRYPDREIHNLSRFLSVMKNPRPLIWRNSHPYCLADRFLDITA 263
Query: 815 PANVHMDGKCNRDIFLYGYLRGCDIKK-GTKVHIAGVGDYPLAGVAIKADPCPLPPVD-- 645
P V + KC+R + LYGYLRG + G +VH+ GVGD ++ + DPCP P +D
Sbjct: 264 PTAVEENPKCDRTVALYGYLRGTNFPALGARVHVPGVGDLSVSSIEALPDPCPTPFMDKA 323
Query: 644 -------DNEKKMQDKE-----PHSAI----------------------ESFRIGTYLRF 567
+++ +K+ P S + E ++ GTY R
Sbjct: 324 MAKATGKPGRRRLGEKQKLLFAPMSDVGGVLVDKACKFDFLDALSRARAEGYKAGTYARI 383
Query: 566 RVLGVPFEMVTNHDPCQPILVGGISRAEDNVGHMQVRLTRHSWHMNKLKTKDPIIVSIGW 387
+ VP E T +P P++VGG++ ED G++QVR+ RH WH LKT DP+I S+GW
Sbjct: 384 VLENVPCEFSTRFNPRFPVIVGGLAPTEDRFGYVQVRIKRHRWHKKILKTNDPLIFSLGW 443
Query: 386 RRYQTTPIY-YQDSNGRHEMLEYTPEDQPCLATFWXXXXXXXXXXXXVQSLADNKAAFRI 210
RR+QTTP+Y DS R+ ML+YTPE C TF+ VQS ++ FRI
Sbjct: 444 RRFQTTPVYSISDSRTRNRMLKYTPEHMHCFGTFYGPLVAPNTGFCCVQSFSNKNPGFRI 503
Query: 209 LATAELLDLNHTANIVKKIKRIGTPCLILNETALIKDMFTSDDEVDRFRDVKIRTACGIQ 30
AT +L+++ T IVKK+K G P I TA IKDMFTS E+ +F IRT GI+
Sbjct: 504 AATGVVLNVDETTEIVKKLKLTGYPYKIFRNTAFIKDMFTSAIEIAKFEGASIRTVSGIR 563
Query: 29 GEVNEA 12
G++ A
Sbjct: 564 GQIKRA 569
>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
bms1, putative [Ricinus communis]
Length = 825
Score = 319 bits (818), Expect = 9e-85
Identities = 150/244 (61%), Positives = 189/244 (77%)
Frame = -2
Query: 1346 PPKVGKSILIKSLIKHFLEQNPDHKRGPNTVLTGNRRRIQFVECPNNMNGMIDAAKYADA 1167
PP+VGKS+LIKSL+KH+ + N RGP T+++G +RR+QFVECPN++NGMIDAAK+AD
Sbjct: 94 PPQVGKSLLIKSLVKHYTKHNLPEVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADL 153
Query: 1166 VILITDANYGYEMETFEYLNLLQVHGMPKVMGALTYLDKIKDANARTLTKRRLMDRFRDN 987
+L+ D +YG+EMETFE+LN+LQVHG PKVMG LT+LDK KD TK+RL RF
Sbjct: 154 ALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTE 213
Query: 986 IHKKARVFYLSGLLHGMYKNDEIRKLANFLSVMEFHTSSWRAAHPYLLVDHFKDVTSPAN 807
I+ A++FYLSGL+HG Y EI LA F+SVM+FH SWR +HPY+LVD F+DVT P
Sbjct: 214 IYDGAKLFYLSGLIHGKYPRREIHNLARFISVMKFHPLSWRTSHPYVLVDRFEDVTPPEQ 273
Query: 806 VHMDGKCNRDIFLYGYLRGCDIKKGTKVHIAGVGDYPLAGVAIKADPCPLPPVDDNEKKM 627
VHM+ K +R++ LYGYLRGC++KKGTKVHIAGVGDY LAGV ADPCPLP +K +
Sbjct: 274 VHMNRKSDRNVTLYGYLRGCNLKKGTKVHIAGVGDYSLAGVTALADPCPLPSA-AKKKGL 332
Query: 626 QDKE 615
+DKE
Sbjct: 333 RDKE 336
Score = 127 bits (318), Expect = 9e-27
Identities = 60/96 (62%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Frame = -2
Query: 623 DKEPHSAIESFRIGTYLRFRVLGVPFEMVTNHDPCQPILVGGISRAEDNVGHMQVRLTRH 444
D+ IE F+ GTY+R V VPFEMV + DPC PILVGGI E+NVG+MQ RL RH
Sbjct: 726 DEVTRLEIEGFQTGTYVRLEVHDVPFEMVEHFDPCHPILVGGIGFGEENVGYMQARLKRH 785
Query: 443 SWHMNKLKTKDPIIVSIGWRRYQTTPIY-YQDSNGR 339
WH LKT+DPIIVSIGWRRYQTTP+Y +D NG+
Sbjct: 786 RWHRKVLKTRDPIIVSIGWRRYQTTPVYAIEDCNGK 821
>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
Length = 1139
Score = 317 bits (813), Expect = 3e-84
Identities = 149/244 (61%), Positives = 190/244 (77%)
Frame = -2
Query: 1346 PPKVGKSILIKSLIKHFLEQNPDHKRGPNTVLTGNRRRIQFVECPNNMNGMIDAAKYADA 1167
PP+VGKS+LIKSL+KH+ + N RGP T+++G RR+QFVECPN++NGMIDAAK+AD
Sbjct: 94 PPQVGKSLLIKSLVKHYTKHNLSEVRGPITIVSGKNRRLQFVECPNDINGMIDAAKFADL 153
Query: 1166 VILITDANYGYEMETFEYLNLLQVHGMPKVMGALTYLDKIKDANARTLTKRRLMDRFRDN 987
+L+ D +YG+EMETFE+LN+LQVHG PKVMG LT+LDK KDA TK+RL RF
Sbjct: 154 ALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTE 213
Query: 986 IHKKARVFYLSGLLHGMYKNDEIRKLANFLSVMEFHTSSWRAAHPYLLVDHFKDVTSPAN 807
I+ A++FYLSGL+HG Y EI LA F+SVM+FH SWRA+HPY+LVD F+DVT P
Sbjct: 214 IYDGAKLFYLSGLVHGKYPKREIHNLARFISVMKFHPLSWRASHPYILVDRFEDVTPPER 273
Query: 806 VHMDGKCNRDIFLYGYLRGCDIKKGTKVHIAGVGDYPLAGVAIKADPCPLPPVDDNEKKM 627
V ++ KC+R+I LYGYLRGC++KKGTKVHIAGVGD+ LAGV ADPCPLP +K +
Sbjct: 274 VQLNNKCDRNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSA-AKKKGL 332
Query: 626 QDKE 615
+D++
Sbjct: 333 RDRD 336
Score = 237 bits (604), Expect = 6e-60
Identities = 117/207 (56%), Positives = 145/207 (70%), Gaps = 1/207 (0%)
Frame = -2
Query: 623 DKEPHSAIESFRIGTYLRFRVLGVPFEMVTNHDPCQPILVGGISRAEDNVGHMQVRLTRH 444
D+E +E FR GTYLR V VPFEMV + DP P+LVGGI E+NVG+MQVR+ RH
Sbjct: 726 DEETRIEVEGFRTGTYLRLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVGYMQVRIKRH 785
Query: 443 SWHMNKLKTKDPIIVSIGWRRYQTTPIYY-QDSNGRHEMLEYTPEDQPCLATFWXXXXXX 267
WH LKT+DPIIVSIGWRRYQT P+Y +D NGRH ML+YT E CLA FW
Sbjct: 786 RWHKKLLKTRDPIIVSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGPLAPP 845
Query: 266 XXXXXXVQSLADNKAAFRILATAELLDLNHTANIVKKIKRIGTPCLILNETALIKDMFTS 87
VQ+L++N+A FRI+ATA +L+ NH A +VKKIK +G PC I +TALIK+MFTS
Sbjct: 846 NTGVVAVQNLSNNQATFRIIATAVVLEFNHAARLVKKIKLVGEPCKIFKKTALIKNMFTS 905
Query: 86 DDEVDRFRDVKIRTACGIQGEVNEAAK 6
D E+ RF ++TA GI+G+V +AAK
Sbjct: 906 DLEIARFEGAAVQTASGIRGQVKKAAK 932
>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
Length = 1305
Score = 317 bits (813), Expect = 3e-84
Identities = 149/244 (61%), Positives = 190/244 (77%)
Frame = -2
Query: 1346 PPKVGKSILIKSLIKHFLEQNPDHKRGPNTVLTGNRRRIQFVECPNNMNGMIDAAKYADA 1167
PP+VGKS+LIKSL+KH+ + N RGP T+++G RR+QFVECPN++NGMIDAAK+AD
Sbjct: 94 PPQVGKSLLIKSLVKHYTKHNLSEVRGPITIVSGKNRRLQFVECPNDINGMIDAAKFADL 153
Query: 1166 VILITDANYGYEMETFEYLNLLQVHGMPKVMGALTYLDKIKDANARTLTKRRLMDRFRDN 987
+L+ D +YG+EMETFE+LN+LQVHG PKVMG LT+LDK KDA TK+RL RF
Sbjct: 154 ALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTE 213
Query: 986 IHKKARVFYLSGLLHGMYKNDEIRKLANFLSVMEFHTSSWRAAHPYLLVDHFKDVTSPAN 807
I+ A++FYLSGL+HG Y EI LA F+SVM+FH SWRA+HPY+LVD F+DVT P
Sbjct: 214 IYDGAKLFYLSGLVHGKYPKREIHNLARFISVMKFHPLSWRASHPYILVDRFEDVTPPER 273
Query: 806 VHMDGKCNRDIFLYGYLRGCDIKKGTKVHIAGVGDYPLAGVAIKADPCPLPPVDDNEKKM 627
V ++ KC+R+I LYGYLRGC++KKGTKVHIAGVGD+ LAGV ADPCPLP +K +
Sbjct: 274 VQLNNKCDRNITLYGYLRGCNLKKGTKVHIAGVGDHSLAGVTGLADPCPLPSA-AKKKGL 332
Query: 626 QDKE 615
+D++
Sbjct: 333 RDRD 336
Score = 237 bits (604), Expect = 6e-60
Identities = 117/207 (56%), Positives = 145/207 (70%), Gaps = 1/207 (0%)
Frame = -2
Query: 623 DKEPHSAIESFRIGTYLRFRVLGVPFEMVTNHDPCQPILVGGISRAEDNVGHMQVRLTRH 444
D+E +E FR GTYLR V VPFEMV + DP P+LVGGI E+NVG+MQVR+ RH
Sbjct: 892 DEETRIEVEGFRTGTYLRLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVGYMQVRIKRH 951
Query: 443 SWHMNKLKTKDPIIVSIGWRRYQTTPIYY-QDSNGRHEMLEYTPEDQPCLATFWXXXXXX 267
WH LKT+DPIIVSIGWRRYQT P+Y +D NGRH ML+YT E CLA FW
Sbjct: 952 RWHKKLLKTRDPIIVSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGPLAPP 1011
Query: 266 XXXXXXVQSLADNKAAFRILATAELLDLNHTANIVKKIKRIGTPCLILNETALIKDMFTS 87
VQ+L++N+A FRI+ATA +L+ NH A +VKKIK +G PC I +TALIK+MFTS
Sbjct: 1012 NTGVVAVQNLSNNQATFRIIATAVVLEFNHAARLVKKIKLVGEPCKIFKKTALIKNMFTS 1071
Query: 86 DDEVDRFRDVKIRTACGIQGEVNEAAK 6
D E+ RF ++TA GI+G+V +AAK
Sbjct: 1072 DLEIARFEGAAVQTASGIRGQVKKAAK 1098
>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
predicted protein [Populus trichocarpa]
Length = 1181
Score = 315 bits (807), Expect = 2e-83
Identities = 146/244 (59%), Positives = 187/244 (76%)
Frame = -2
Query: 1346 PPKVGKSILIKSLIKHFLEQNPDHKRGPNTVLTGNRRRIQFVECPNNMNGMIDAAKYADA 1167
PP+VGKS+LIK L+KH+ + N RGP T+++G +RR+QFVECPN++NGMIDAAK+AD
Sbjct: 91 PPQVGKSLLIKCLVKHYTKHNIQEVRGPITIVSGKKRRVQFVECPNDINGMIDAAKFADL 150
Query: 1166 VILITDANYGYEMETFEYLNLLQVHGMPKVMGALTYLDKIKDANARTLTKRRLMDRFRDN 987
+L+ D +YG+EMETFE+LN+LQVHG PK+MG LT+LD+ KD TK+RL RF
Sbjct: 151 ALLLIDGSYGFEMETFEFLNILQVHGFPKIMGVLTHLDQFKDVKKLKKTKQRLKHRFWTE 210
Query: 986 IHKKARVFYLSGLLHGMYKNDEIRKLANFLSVMEFHTSSWRAAHPYLLVDHFKDVTSPAN 807
I+ A++FYLSGL+HG Y EI LA F+SVM+FH SWR +HPY+L D F+DVT P
Sbjct: 211 IYDGAKLFYLSGLIHGKYVKREIHNLARFISVMKFHPLSWRTSHPYVLADRFEDVTPPER 270
Query: 806 VHMDGKCNRDIFLYGYLRGCDIKKGTKVHIAGVGDYPLAGVAIKADPCPLPPVDDNEKKM 627
V +D KC+R+I LYGYLRGC++K+GTKVHIAGVGDY LAGV ADPCPLP +K +
Sbjct: 271 VRVDNKCDRNITLYGYLRGCNLKRGTKVHIAGVGDYNLAGVTALADPCPLPSA-AKKKGL 329
Query: 626 QDKE 615
+DKE
Sbjct: 330 RDKE 333
Score = 241 bits (614), Expect = 4e-61
Identities = 119/207 (57%), Positives = 145/207 (70%), Gaps = 1/207 (0%)
Frame = -2
Query: 623 DKEPHSAIESFRIGTYLRFRVLGVPFEMVTNHDPCQPILVGGISRAEDNVGHMQVRLTRH 444
D+E IE F+ GTYLR + VPFEMV + DPC PILVGGI E++VG+MQ RL RH
Sbjct: 767 DEETRLEIEGFQTGTYLRLELHDVPFEMVEHFDPCDPILVGGIGLGEEHVGYMQARLKRH 826
Query: 443 SWHMNKLKTKDPIIVSIGWRRYQTTPIY-YQDSNGRHEMLEYTPEDQPCLATFWXXXXXX 267
WH LKTKDP+I SIGWRRYQTTP+Y +D NGRH ML+YTPE CLATFW
Sbjct: 827 RWHRKVLKTKDPVIFSIGWRRYQTTPVYAIEDRNGRHRMLKYTPEHMHCLATFWGPLAPP 886
Query: 266 XXXXXXVQSLADNKAAFRILATAELLDLNHTANIVKKIKRIGTPCLILNETALIKDMFTS 87
VQ+LA+N+A+FRI ATA +L+ NH A +VKK+K +G PC I +TALI +MFTS
Sbjct: 887 NTGVVAVQNLANNQASFRITATAVVLEFNHAAKMVKKVKLVGHPCKIFKKTALIMNMFTS 946
Query: 86 DDEVDRFRDVKIRTACGIQGEVNEAAK 6
D EV RF +RT GI+G+V +AAK
Sbjct: 947 DLEVARFEGAAVRTVSGIRGQVKKAAK 973