BLASTX nr result

ID: Papaver22_contig00008353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00008353
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei...   283   8e-75
ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotei...   282   2e-74
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...   282   2e-74
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]   282   2e-74
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420...   281   3e-74

>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  283 bits (725), Expect = 8e-75
 Identities = 141/163 (86%), Positives = 149/163 (91%)
 Frame = -3

Query: 490  DSSYRPCPLAQEYIGITVKKPLQRFQLMNDICYEKVVARAGKHQVLIFVHSRKETVKTAR 311
            D+SYRP PL+Q+Y+GITVKKPLQRFQLMNDICYEKV+A AGKHQVLIFVHSRKET KTAR
Sbjct: 713  DNSYRPVPLSQQYVGITVKKPLQRFQLMNDICYEKVMAVAGKHQVLIFVHSRKETAKTAR 772

Query: 310  AIRDAALANDTLSRFLKEDSVSREILQTESGHVRSNDLKDLLPYGFAIHHAGMVRTDREL 131
            AIRDAALANDTL RFLKEDS SREIL T +  V+SNDLKDLLPYGFAIHHAGM RTDR+L
Sbjct: 773  AIRDAALANDTLGRFLKEDSASREILHTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQL 832

Query: 130  VEILFGQGDVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG 2
            VE LF  G VQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG
Sbjct: 833  VEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG 875



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 53/157 (33%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
 Frame = -3

Query: 478  RPCPLAQEYIGITVKKPLQRFQLMNDICYEKVV--ARAGKHQVLIFVHSRKETVKTARAI 305
            RP PL     GI +     R Q M    Y  +V  A+ GK   LIFV +RK    TA  +
Sbjct: 1556 RPVPLEIHIQGIDITNFEARMQAMTKPTYTAIVQHAKNGK-PALIFVPTRKHVRLTAVDM 1614

Query: 304  RDAALANDTLSRFLKEDSVSREILQTESGHVRSNDLKDLLPYGFAIHHAGMVRTDRELVE 125
               + A+     FL     S E L+     +    LK  L  G    H G+   D ++V 
Sbjct: 1615 ITYSGADSGEKPFLLR---SAEELEPFLDKITDEMLKVTLREGVGYLHEGLNSLDHDIVT 1671

Query: 124  ILFGQGDVQVLVSTATLAWGVNLPAHTVIIKGTQIYN 14
             LF  G +QV V  +++ WGV L AH V++ GTQ Y+
Sbjct: 1672 QLFEAGWIQVCVLNSSMCWGVTLLAHLVVVMGTQYYD 1708


>ref|XP_003546783.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Glycine max]
          Length = 2183

 Score =  282 bits (721), Expect = 2e-74
 Identities = 140/163 (85%), Positives = 148/163 (90%)
 Frame = -3

Query: 490  DSSYRPCPLAQEYIGITVKKPLQRFQLMNDICYEKVVARAGKHQVLIFVHSRKETVKTAR 311
            D+SYRP PL+Q+Y+GITVKKPLQRFQLMNDICYEKV+A AGKHQVLIFVHSRKET KTAR
Sbjct: 713  DNSYRPVPLSQQYVGITVKKPLQRFQLMNDICYEKVMAVAGKHQVLIFVHSRKETAKTAR 772

Query: 310  AIRDAALANDTLSRFLKEDSVSREILQTESGHVRSNDLKDLLPYGFAIHHAGMVRTDREL 131
            AIRD ALANDTL RFLKEDS SREIL T +  V+SNDLKDLLPYGFAIHHAGM RTDR+L
Sbjct: 773  AIRDTALANDTLGRFLKEDSASREILHTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQL 832

Query: 130  VEILFGQGDVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG 2
            VE LF  G VQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG
Sbjct: 833  VEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG 875



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 53/157 (33%), Positives = 73/157 (46%), Gaps = 2/157 (1%)
 Frame = -3

Query: 478  RPCPLAQEYIGITVKKPLQRFQLMNDICYEKVV--ARAGKHQVLIFVHSRKETVKTARAI 305
            RP PL     GI +     R Q M    Y  +V  A+ GK   L+FV +RK    TA  +
Sbjct: 1556 RPVPLEIHIQGIDIANFEARMQAMTKPTYTAIVQHAKNGK-PALVFVPTRKHVRLTAVDL 1614

Query: 304  RDAALANDTLSRFLKEDSVSREILQTESGHVRSNDLKDLLPYGFAIHHAGMVRTDRELVE 125
               + A+     FL     S E L+     +    LK  L  G    H G+   DR++V 
Sbjct: 1615 ITYSGADSGEKPFLLR---SAEELEPFLDKITDEMLKVTLREGVGYLHEGLNSLDRDIVT 1671

Query: 124  ILFGQGDVQVLVSTATLAWGVNLPAHTVIIKGTQIYN 14
             LF  G +QV V  +++ WGV L AH V++ GTQ Y+
Sbjct: 1672 QLFEAGWIQVCVLNSSMCWGVTLSAHLVVVMGTQYYD 1708


>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score =  282 bits (721), Expect = 2e-74
 Identities = 139/163 (85%), Positives = 148/163 (90%)
 Frame = -3

Query: 490  DSSYRPCPLAQEYIGITVKKPLQRFQLMNDICYEKVVARAGKHQVLIFVHSRKETVKTAR 311
            D+SYRPCPLAQ+YIGITVKKPLQRFQLMND+CYEKV+A AGKHQVLIFVHSRKET KTAR
Sbjct: 708  DNSYRPCPLAQQYIGITVKKPLQRFQLMNDVCYEKVMAVAGKHQVLIFVHSRKETAKTAR 767

Query: 310  AIRDAALANDTLSRFLKEDSVSREILQTESGHVRSNDLKDLLPYGFAIHHAGMVRTDREL 131
            AIRD ALANDTL RFLKEDS SREIL + +  V++NDLKDLLPYGFAIHHAGM R DR+L
Sbjct: 768  AIRDTALANDTLGRFLKEDSASREILHSHTELVKNNDLKDLLPYGFAIHHAGMARADRQL 827

Query: 130  VEILFGQGDVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG 2
            VE LF  G VQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG
Sbjct: 828  VEELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG 870



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
 Frame = -3

Query: 478  RPCPLAQEYIGITVKKPLQRFQLMNDICYEKVVARA-GKHQVLIFVHSRKETVKTARAIR 302
            RP PL     G+ +     R Q M    Y  +V  A  +   ++FV +RK    TA  + 
Sbjct: 1551 RPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNRKPAIVFVPTRKHVRLTAVDLT 1610

Query: 301  DAALANDTLS-RFLKEDSVSREILQTESGHVRSNDLKDLLPYGFAIHHAGMVRTDRELVE 125
              + A+   +  FL     S E L+   G ++   L+  L +G    H G+   D+E+V 
Sbjct: 1611 TYSSADGGENPTFLLR---SPEELEPFVGKIQEEMLRATLRHGVGYLHEGLTGMDQEVVS 1667

Query: 124  ILFGQGDVQVLVSTATLAWGVNLPAHTVIIKGTQIYN 14
             LF  G +QV V +++L WGV L AH V++ GTQ Y+
Sbjct: 1668 QLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYD 1704


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score =  282 bits (721), Expect = 2e-74
 Identities = 139/163 (85%), Positives = 148/163 (90%)
 Frame = -3

Query: 490  DSSYRPCPLAQEYIGITVKKPLQRFQLMNDICYEKVVARAGKHQVLIFVHSRKETVKTAR 311
            D+SYRPCPLAQ+YIGITVKKPLQRFQLMND+CYEKV+A AGKHQVLIFVHSRKET KTAR
Sbjct: 675  DNSYRPCPLAQQYIGITVKKPLQRFQLMNDVCYEKVMAVAGKHQVLIFVHSRKETAKTAR 734

Query: 310  AIRDAALANDTLSRFLKEDSVSREILQTESGHVRSNDLKDLLPYGFAIHHAGMVRTDREL 131
            AIRD ALANDTL RFLKEDS SREIL + +  V++NDLKDLLPYGFAIHHAGM R DR+L
Sbjct: 735  AIRDTALANDTLGRFLKEDSASREILHSHTELVKNNDLKDLLPYGFAIHHAGMARADRQL 794

Query: 130  VEILFGQGDVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG 2
            VE LF  G VQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG
Sbjct: 795  VEELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG 837



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 50/157 (31%), Positives = 76/157 (48%), Gaps = 2/157 (1%)
 Frame = -3

Query: 478  RPCPLAQEYIGITVKKPLQRFQLMNDICYEKVVARA-GKHQVLIFVHSRKETVKTARAIR 302
            RP PL     G+ +     R Q M    Y  +V  A  +   ++FV +RK    TA  + 
Sbjct: 1518 RPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNRKPAIVFVPTRKHVRLTAVDLT 1577

Query: 301  DAALANDTLS-RFLKEDSVSREILQTESGHVRSNDLKDLLPYGFAIHHAGMVRTDRELVE 125
              + A+   +  FL     S E L+   G ++   L+  L +G    H G+   D+E+V 
Sbjct: 1578 TYSSADGGENPTFLLR---SPEELEPFVGKIQEEMLRATLRHGVGYLHEGLTGMDQEVVS 1634

Query: 124  ILFGQGDVQVLVSTATLAWGVNLPAHTVIIKGTQIYN 14
             LF  G +QV V +++L WGV L AH V++ GTQ Y+
Sbjct: 1635 QLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYD 1671


>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
           putative [Ricinus communis]
          Length = 1809

 Score =  281 bits (720), Expect = 3e-74
 Identities = 140/163 (85%), Positives = 149/163 (91%)
 Frame = -3

Query: 490 DSSYRPCPLAQEYIGITVKKPLQRFQLMNDICYEKVVARAGKHQVLIFVHSRKETVKTAR 311
           D+SYRP PL+Q+YIGITVKKPLQRFQLMNDICYEKV+A AGKHQVLIFVHSRKET KTAR
Sbjct: 341 DNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKVMAVAGKHQVLIFVHSRKETAKTAR 400

Query: 310 AIRDAALANDTLSRFLKEDSVSREILQTESGHVRSNDLKDLLPYGFAIHHAGMVRTDREL 131
           AIRD+ALANDTL RFLKEDS SREILQ+ +  V+SNDLKDLLPYGFAIHHAGM R DR+L
Sbjct: 401 AIRDSALANDTLGRFLKEDSASREILQSHTDMVKSNDLKDLLPYGFAIHHAGMTRADRQL 460

Query: 130 VEILFGQGDVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG 2
           VE LF  G VQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG
Sbjct: 461 VEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKG 503



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
 Frame = -3

Query: 478  RPCPLAQEYIGITVKKPLQRFQLMNDICYEKVV--ARAGKHQVLIFVHSRKETVKTARAI 305
            RP PL     G+ +     R Q M    Y  +V  A+ GK   ++FV +RK    TA  +
Sbjct: 1184 RPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNGK-PAIVFVPTRKHVRLTAVDL 1242

Query: 304  RDAALANDTLSRFLKEDSVSREILQTESGHVRSNDLKDLLPYGFAIHHAGMVRTDRELVE 125
               + A+          S+  E L+   G V+   L+  L  G    H G+   D+E+V 
Sbjct: 1243 MTYSSADSGEKPAFMMRSI--EELEPFVGRVQDEMLRSTLRQGVGYLHEGLSSLDQEVVS 1300

Query: 124  ILFGQGDVQVLVSTATLAWGVNLPAHTVIIKGTQIYN 14
             LF  G +QV V ++++ WGV L AH V++ GTQ Y+
Sbjct: 1301 QLFEAGWIQVCVMSSSMCWGVPLAAHLVVVMGTQYYD 1337


Top