BLASTX nr result

ID: Papaver22_contig00008223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00008223
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_181567.3| transducin/WD-40 repeat-containing protein [Ara...    77   1e-12
ref|XP_002881717.1| transducin family protein [Arabidopsis lyrat...    77   1e-12
gb|AAD25679.1| putative WD-40 repeat protein [Arabidopsis thaliana]    77   1e-12
ref|XP_002885860.1| predicted protein [Arabidopsis lyrata subsp....    76   2e-12
gb|AER28311.1| WD40 repeat protein [Gossypium hirsutum]                75   4e-12

>ref|NP_181567.3| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
           gi|330254724|gb|AEC09818.1| transducin/WD-40
           repeat-containing protein [Arabidopsis thaliana]
          Length = 753

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/41 (82%), Positives = 37/41 (90%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3   VPLEILRGHSK--GVMDCTFHPRQPWLFTAGSDSVIKLYCH 119
           VPLEILRGHS   GV+DC FHPRQPWLFTAG+DS+IKLYCH
Sbjct: 713 VPLEILRGHSSKGGVLDCKFHPRQPWLFTAGADSIIKLYCH 753


>ref|XP_002881717.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327556|gb|EFH57976.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 757

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/41 (82%), Positives = 37/41 (90%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3   VPLEILRGHSK--GVMDCTFHPRQPWLFTAGSDSVIKLYCH 119
           VPLEILRGHS   GV+DC FHPRQPWLFTAG+DS+IKLYCH
Sbjct: 717 VPLEILRGHSSKGGVLDCKFHPRQPWLFTAGADSIIKLYCH 757


>gb|AAD25679.1| putative WD-40 repeat protein [Arabidopsis thaliana]
          Length = 775

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/41 (82%), Positives = 37/41 (90%), Gaps = 2/41 (4%)
 Frame = +3

Query: 3   VPLEILRGHSK--GVMDCTFHPRQPWLFTAGSDSVIKLYCH 119
           VPLEILRGHS   GV+DC FHPRQPWLFTAG+DS+IKLYCH
Sbjct: 735 VPLEILRGHSSKGGVLDCKFHPRQPWLFTAGADSIIKLYCH 775


>ref|XP_002885860.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297331700|gb|EFH62119.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 839

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 35/44 (79%), Positives = 37/44 (84%), Gaps = 5/44 (11%)
 Frame = +3

Query: 3   VPLEILRGHSK-----GVMDCTFHPRQPWLFTAGSDSVIKLYCH 119
           VPLEILRGHS      GV+DC FHPRQPWLFTAG+DSVIKLYCH
Sbjct: 796 VPLEILRGHSTSSNGGGVLDCKFHPRQPWLFTAGADSVIKLYCH 839


>gb|AER28311.1| WD40 repeat protein [Gossypium hirsutum]
          Length = 412

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/43 (79%), Positives = 37/43 (86%), Gaps = 4/43 (9%)
 Frame = +3

Query: 3   VPLEILRGHS----KGVMDCTFHPRQPWLFTAGSDSVIKLYCH 119
           VPLEILRGH+    +GVMDC FHPRQPWLFTAG+DS IKLYCH
Sbjct: 370 VPLEILRGHTSYDGRGVMDCKFHPRQPWLFTAGADSSIKLYCH 412


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