BLASTX nr result

ID: Papaver22_contig00008116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00008116
         (1560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144726.1| PREDICTED: translation initiation factor IF-...   239   2e-60
ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|2...   239   2e-60
ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   236   9e-60
ref|XP_002276984.1| PREDICTED: translation initiation factor IF-...   234   4e-59
ref|XP_002533227.1| translation initiation factor if-3, putative...   230   9e-58

>ref|XP_004144726.1| PREDICTED: translation initiation factor IF-3-like [Cucumis sativus]
          Length = 299

 Score =  239 bits (609), Expect = 2e-60
 Identities = 116/171 (67%), Positives = 146/171 (85%)
 Frame = -1

Query: 1176 DTRVIGVVSKSEAIQMAEDAELDLVIVSPEADPPVLKMMDYNKHRYXXXXXXXXXXXKSA 997
            +  ++GVVSK++AIQMAEDAELDLV+VSP+ADPPV+++MDYNK+RY           KSA
Sbjct: 126  EQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA 185

Query: 996  ATRMDMKELKMGCNIDSHDYSVRLRAAEKFLKDGDKVKIVVNMKGRQHEFKNNAIELIKR 817
            ATRMD+KELKMG NID HDYSVRL+AA+KFLKDGDKVK++VN+KGR++EF+N AIELI+R
Sbjct: 186  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 245

Query: 816  FQTDIGELATEESKSFREKNIFIVLLPNKTILQKALEQPKKKEKTVEIGTS 664
            FQ ++GELATEE+K+FR++NIFIVL+PNK +LQKA E PKKK+K    G S
Sbjct: 246  FQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVS 296


>ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|222866557|gb|EEF03688.1|
            predicted protein [Populus trichocarpa]
          Length = 278

 Score =  239 bits (609), Expect = 2e-60
 Identities = 136/273 (49%), Positives = 177/273 (64%), Gaps = 5/273 (1%)
 Frame = -1

Query: 1485 TCKPLLSRTTKPPT----YSLSSIESAIAGVRICNPDFLKIDSTHVHSIYLPSASVTAXX 1318
            +C PL++RTT   T      LSS++S + G+R+ NP+  K DS    S   PS   TA  
Sbjct: 11   SCFPLVTRTTTTKTTHYALCLSSLDSKLFGLRLHNPNLSKPDSLPCSS---PSPVTTARF 67

Query: 1317 XXXXXXXXXXXXXXXXRDMRQVEEADPCXXXXXXXXXXXXXXDARSNDTR-VIGVVSKSE 1141
                             D R+  ++D                    +  + ++GVV+  +
Sbjct: 68   GGPRSY-----------DSRRPRKSDSDDDQALNISSIRSATVRLIDQQQNMVGVVTVRD 116

Query: 1140 AIQMAEDAELDLVIVSPEADPPVLKMMDYNKHRYXXXXXXXXXXXKSAATRMDMKELKMG 961
            AIQMAED EL+LVIVSP+ADPPV+++MDYNK RY           KSAA+RMD+KELKMG
Sbjct: 117  AIQMAEDTELNLVIVSPDADPPVVRIMDYNKFRYEQQKKKRGQQKKSAASRMDLKELKMG 176

Query: 960  CNIDSHDYSVRLRAAEKFLKDGDKVKIVVNMKGRQHEFKNNAIELIKRFQTDIGELATEE 781
             NID HDY VRLRAA KFLKDGDKVK++VN+KGR++EF+NNAIEL++RFQ D+GELATEE
Sbjct: 177  YNIDQHDYDVRLRAARKFLKDGDKVKVIVNLKGRENEFRNNAIELLRRFQNDVGELATEE 236

Query: 780  SKSFREKNIFIVLLPNKTILQKALEQPKKKEKT 682
            SK+FR++N FI L+PNK +LQKA E PKKK+K+
Sbjct: 237  SKNFRDRNAFITLVPNKALLQKAQEPPKKKDKS 269


>ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor
            IF-3-like [Cucumis sativus]
          Length = 299

 Score =  236 bits (603), Expect = 9e-60
 Identities = 115/171 (67%), Positives = 145/171 (84%)
 Frame = -1

Query: 1176 DTRVIGVVSKSEAIQMAEDAELDLVIVSPEADPPVLKMMDYNKHRYXXXXXXXXXXXKSA 997
            +  ++GVVSK++AIQMAEDAELDLV+VSP+ADPPV+++MDYNK+RY           KSA
Sbjct: 126  EQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA 185

Query: 996  ATRMDMKELKMGCNIDSHDYSVRLRAAEKFLKDGDKVKIVVNMKGRQHEFKNNAIELIKR 817
            ATRMD+KELKMG NID HDYSVRL+AA+KFLKDGDKVK++VN+KGR++EF+N AIELI+R
Sbjct: 186  ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 245

Query: 816  FQTDIGELATEESKSFREKNIFIVLLPNKTILQKALEQPKKKEKTVEIGTS 664
            FQ ++GELATEE+K+FR++NIFIVL+PNK +LQKA E PKK +K    G S
Sbjct: 246  FQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKXDKPAVNGVS 296


>ref|XP_002276984.1| PREDICTED: translation initiation factor IF-3 [Vitis vinifera]
            gi|297743667|emb|CBI36550.3| unnamed protein product
            [Vitis vinifera]
          Length = 272

 Score =  234 bits (598), Expect = 4e-59
 Identities = 134/268 (50%), Positives = 169/268 (63%), Gaps = 2/268 (0%)
 Frame = -1

Query: 1479 KPLLSRTTKPPTYSLSSIESAIAGVRICNPDFLKIDS--THVHSIYLPSASVTAXXXXXX 1306
            KP + RT    +    S++S + GVR+C+P F K  S  + +H       SVTA      
Sbjct: 11   KPFIFRTKTTSSPLYFSLDSQLFGVRLCSPTFSKCRSFSSSLHR------SVTARYGGYR 64

Query: 1305 XXXXXXXXXXXXRDMRQVEEADPCXXXXXXXXXXXXXXDARSNDTRVIGVVSKSEAIQMA 1126
                         D  Q  +                          ++GVVSKS+AIQMA
Sbjct: 65   SSGDAWRSRQRDSDDDQALDVSSIRSASVRLI---------DEQQNMVGVVSKSQAIQMA 115

Query: 1125 EDAELDLVIVSPEADPPVLKMMDYNKHRYXXXXXXXXXXXKSAATRMDMKELKMGCNIDS 946
            EDAELDLV++SP+ADPPV+++MDYNK+RY           KSAA RMD+KELKMG NIDS
Sbjct: 116  EDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAANRMDLKELKMGYNIDS 175

Query: 945  HDYSVRLRAAEKFLKDGDKVKIVVNMKGRQHEFKNNAIELIKRFQTDIGELATEESKSFR 766
            HDYSVRL+AA KFL+DGDKVKI+VN+KGR++EF+N AIELI+RFQ D+GELATEESK+F 
Sbjct: 176  HDYSVRLKAARKFLQDGDKVKIIVNLKGRENEFRNIAIELIRRFQNDVGELATEESKNFS 235

Query: 765  EKNIFIVLLPNKTILQKALEQPKKKEKT 682
             +NIFIVL+PNK +LQK  E  KK EK+
Sbjct: 236  VRNIFIVLVPNKALLQKGQESSKKTEKS 263


>ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis]
            gi|223526947|gb|EEF29148.1| translation initiation factor
            if-3, putative [Ricinus communis]
          Length = 274

 Score =  230 bits (586), Expect = 9e-58
 Identities = 138/274 (50%), Positives = 171/274 (62%), Gaps = 5/274 (1%)
 Frame = -1

Query: 1488 FTCKPLLSR---TTKPPTYSLSSIESAIAGVRI--CNPDFLKIDSTHVHSIYLPSASVTA 1324
            F   PLL++    TK   + LSS+ES + G+R     PD L         I L  ASV  
Sbjct: 8    FPFNPLLTQLTTATKTTQFILSSLESKLFGLRFHCSKPDSL---------ISLSRASVVT 58

Query: 1323 XXXXXXXXXXXXXXXXXXRDMRQVEEADPCXXXXXXXXXXXXXXDARSNDTRVIGVVSKS 1144
                               D     E D                D + N   ++GVV KS
Sbjct: 59   SARFGGGFRSSGDRRSRQSD----SEDDHALDISTIRSATVRLIDEQQN---MVGVVPKS 111

Query: 1143 EAIQMAEDAELDLVIVSPEADPPVLKMMDYNKHRYXXXXXXXXXXXKSAATRMDMKELKM 964
            EAIQMAE+A LDLVI+SP+ADPPV+++MDYNK+RY           KSAATRMD+KELKM
Sbjct: 112  EAIQMAENAALDLVILSPDADPPVVRIMDYNKYRYELQKKKKGQQKKSAATRMDLKELKM 171

Query: 963  GCNIDSHDYSVRLRAAEKFLKDGDKVKIVVNMKGRQHEFKNNAIELIKRFQTDIGELATE 784
            G NID HDY VRLRAA KFLKDGDKVK++VN+KGR++EF+N AIELI+RFQ D+GELATE
Sbjct: 172  GYNIDQHDYDVRLRAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELATE 231

Query: 783  ESKSFREKNIFIVLLPNKTILQKALEQPKKKEKT 682
            E+K+FR++NIFI L PNK ILQK+ E PKK++K+
Sbjct: 232  ETKNFRDRNIFITLAPNKAILQKSQEPPKKRDKS 265


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