BLASTX nr result

ID: Papaver22_contig00008028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00008028
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus commu...   125   9e-27
ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containin...   106   8e-21
ref|XP_003545861.1| PREDICTED: katanin p80 WD40 repeat-containin...   101   2e-19
ref|XP_003635573.1| PREDICTED: uncharacterized protein LOC100853...    97   5e-18
ref|XP_002266048.2| PREDICTED: katanin p80 WD40 repeat-containin...    97   5e-18

>ref|XP_002521412.1| katanin P80 subunit, putative [Ricinus communis]
            gi|223539311|gb|EEF40902.1| katanin P80 subunit, putative
            [Ricinus communis]
          Length = 936

 Score =  125 bits (315), Expect = 9e-27
 Identities = 99/294 (33%), Positives = 147/294 (50%), Gaps = 12/294 (4%)
 Frame = -1

Query: 852  RNSVDLWVADISLIEPHRVGGTPQSCGNKEQKFDI---------QEGIVQSSTERHTSPR 700
            RNSV +WVAD+SLIEP+ VG  P+     E+KF I         + G+  +S  R  SP 
Sbjct: 298  RNSVAVWVADVSLIEPYGVGFIPEESDCIEKKFSIPKSDSPDKVRSGMRSTSHLRSLSPD 357

Query: 699  AYEATEYRNIYVDTTDSRKVAPKKIDLDNDPKVVRMLDPADNYNLSSPRKYIEPESRERN 520
             YE+ E +NIYVD+ D + V+ +K+     PK V  LD  +  N  S +K        + 
Sbjct: 358  -YESKEIKNIYVDSADGKPVSSQKVGSLTSPKRVLPLDSKEMSNPPSDKKIPVTGGNAKA 416

Query: 519  NSHAKSRSFTPPLVVPRNN--AESTVRPRREANSSERGSPGIRREPTLTRRPSSRKSD-S 349
            +  A ++SF  P VVPR+N   +++    RE  +  R  PG+   P   +R S+ K+D  
Sbjct: 417  DGEAFNKSFVVPTVVPRDNPIEKNSSNSGRETVTFSRTRPGMLLRPAHMQRLSNSKNDVE 476

Query: 348  KLSTAAEPGFVSSKKSGSDISEEPKFHFRFLSINEPTKTXXXXXXXXXXXXXXXERAPSP 169
            KLS A E    S+  S    + + K     +      K+               E+  SP
Sbjct: 477  KLSVALESETFSNMPSEKVSAMDLKLQSLNVLEEGVQKSYEEKSSDFKNVAEKFEKDLSP 536

Query: 168  DVPLSSSCENRVQAQSSNGETSSTKIVRGVAVQLGRTRSLVQRWESRDKCNNSE 7
            + P  SS E+  ++ ++N    S KI+ GVAV  GRTRSLV+R+E R+K +N +
Sbjct: 537  EKP--SSQEHCDESVNNNRAIPSVKIINGVAVVAGRTRSLVERFERREKFSNED 588


>ref|XP_003543076.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            1-like [Glycine max]
          Length = 824

 Score =  106 bits (264), Expect = 8e-21
 Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 11/294 (3%)
 Frame = -1

Query: 852  RNSVDLWVADISLIEPHRVGGTPQSCGNKEQKFDIQEGIVQ--------SSTERHTSPRA 697
            RNSV +WVADISLIEP+  G  P+   + EQK  +Q   ++        +S  R  SP  
Sbjct: 287  RNSVGVWVADISLIEPYGTGLDPKKNESTEQKLGLQGSKLEKVEVNVGPTSGSRSMSPD- 345

Query: 696  YEATEYRNIYVDTTDSRKVAPKKIDLDNDPKVVRMLDPADNYNLSSPRKYIEPESRERNN 517
             E+ E +NIY+D++  + V  ++    +  KV    +  +  NL + ++     +R ++N
Sbjct: 346  -ESKEIKNIYIDSSGGKPVTLQRSGSLSSTKVDLPEEFKEICNLGTMKQSPATGARVKSN 404

Query: 516  SHAKSRSFTPPLVVPRNNAESTV--RPRREANSSERGSPGIRREPTLTRRPSSRKSD-SK 346
              A  +SF  P +VPR+  +  V  +  +E  +  +  PG+   P   RR S+ + D  +
Sbjct: 405  EQAIRKSFIAPNIVPRDTPDGKVSAKSEKETITFSKTKPGMLLRPAHVRRASTGRFDVDR 464

Query: 345  LSTAAEPGFVSSKKSGSDISEEPKFHFRFLSINEPTKTXXXXXXXXXXXXXXXERAPSPD 166
             S     G         D ++EPKF     S NE  ++               +      
Sbjct: 465  FSEDVNSGTFCDTAIKLDSTKEPKFQPNLGSQNEVKESCEDKHPIKSVTDKFDKTLSPSR 524

Query: 165  VPLSSSCENRVQAQSSNGETSSTKIVRGVAVQLGRTRSLVQRWESRDKCNNSED 4
                + C+   ++     E S  K V GVAV  GRTRSLV+R+E RDK   +ED
Sbjct: 525  FSEQTKCD---ESSLCKEEISPVKYVNGVAVVRGRTRSLVERFERRDKIQINED 575


>ref|XP_003545861.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            1-like [Glycine max]
          Length = 825

 Score =  101 bits (252), Expect = 2e-19
 Identities = 85/292 (29%), Positives = 128/292 (43%), Gaps = 9/292 (3%)
 Frame = -1

Query: 852  RNSVDLWVADISLIEPHRVGGTPQSCGNKEQKFDIQEGIVQ------SSTERHTSPRAYE 691
            RNSV +WVADISLIEP+  G  P+     EQK  +Q   ++        T    S    E
Sbjct: 287  RNSVGVWVADISLIEPYGAGLDPKKNEGTEQKLGLQGSKLEKVEVNVGPTSGFRSMSPDE 346

Query: 690  ATEYRNIYVDTTDSRKVAPKKIDLDNDPKVVRMLDPADNYNLSSPRKYIEPESRERNNSH 511
            + E +NIY+D++  + V  ++    +  KV    +  +  NL + ++     +R ++N  
Sbjct: 347  SKEIKNIYIDSSGGKPVTLQRSGSLSSTKVDLPEEFKEICNLGTMKQSPATGARVKSNEQ 406

Query: 510  AKSRSFTPPLVVPRNNAESTV--RPRREANSSERGSPGIRREPTLTRRPSSRKSD-SKLS 340
            A  +SF  P +VPR+  +  V  +  +E  S  +  PG+   P   RR S+ + D  + S
Sbjct: 407  AIRKSFIAPNIVPRDTPDGKVSAKSEKETISFSKTKPGMLLRPAHVRRASTGRFDVDRFS 466

Query: 339  TAAEPGFVSSKKSGSDISEEPKFHFRFLSINEPTKTXXXXXXXXXXXXXXXERAPSPDVP 160
                          S I++EP F    L      K                ++  SP   
Sbjct: 467  EDVNSRTFCDTAIKSGITKEPSFQLN-LGFQNEVKESCEDKHPIKNVTDKFDKTLSPS-- 523

Query: 159  LSSSCENRVQAQSSNGETSSTKIVRGVAVQLGRTRSLVQRWESRDKCNNSED 4
              S    R ++     E S  K V GVAV  GRTRSLV+R+E R+K    ED
Sbjct: 524  RFSEQTKRDESSPCKEEISPVKYVNGVAVVRGRTRSLVERFERREKIQIDED 575


>ref|XP_003635573.1| PREDICTED: uncharacterized protein LOC100853117, partial [Vitis
           vinifera]
          Length = 332

 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 70/219 (31%), Positives = 111/219 (50%), Gaps = 12/219 (5%)
 Frame = -1

Query: 852 RNSVDLWVADISLIEPHRVGGTPQSCGNKEQKFDIQEG---------IVQSSTERHTSPR 700
           RNSV +WVADIS IEP+  G   +  G  E+KFD+QE          +  +S  R  SP 
Sbjct: 85  RNSVGVWVADISQIEPYGSGLLSKKNGCVERKFDLQESHSVEKVGSSVRSTSGFRSMSPD 144

Query: 699 AYEATEYRNIYVDTTDSRKVAPKKIDLDNDPKVVRMLDPADNYNLSSPRKYIEPESRERN 520
            Y+  E +NIYVD++    VA +K+   N PKV+   D  +  NL + +         + 
Sbjct: 145 -YDTKEIKNIYVDSSGGNSVASQKVRSFNTPKVLFPSDSKEITNLPTQKHSPGVGLHAKT 203

Query: 519 NSHAKSRSFTPPLVVPRNNAE--STVRPRREANSSERGSPGIRREPTLTRRPSSRKSDS- 349
              A +RSF  P +V R+N++       RRE+ +  R + G+  + +  RRPS+ K ++ 
Sbjct: 204 QGRAITRSFVVPSIVTRDNSDGKDLANSRRESITPARANTGMSLKTSHIRRPSNSKYEAE 263

Query: 348 KLSTAAEPGFVSSKKSGSDISEEPKFHFRFLSINEPTKT 232
           +L  A E G   S  +  D + +  FH R +  +E +++
Sbjct: 264 RLLMAVESGSFDSMPNDLDSAMKQNFHSRLVVDDEASES 302


>ref|XP_002266048.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
           1-like [Vitis vinifera]
          Length = 545

 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 70/219 (31%), Positives = 111/219 (50%), Gaps = 12/219 (5%)
 Frame = -1

Query: 852 RNSVDLWVADISLIEPHRVGGTPQSCGNKEQKFDIQEG---------IVQSSTERHTSPR 700
           RNSV +WVADIS IEP+  G   +  G  E+KFD+QE          +  +S  R  SP 
Sbjct: 298 RNSVGVWVADISKIEPYGSGLLSKKNGCVERKFDLQESHSVEKVGSSVRSTSGFRSMSPD 357

Query: 699 AYEATEYRNIYVDTTDSRKVAPKKIDLDNDPKVVRMLDPADNYNLSSPRKYIEPESRERN 520
            Y+  E +NIYVD++    VA +K+   N PKV+   D  +  NL + +         + 
Sbjct: 358 -YDTKEIKNIYVDSSGGNSVASQKVRSFNTPKVLFPSDSKEITNLPTQKHSPGVGLHAKT 416

Query: 519 NSHAKSRSFTPPLVVPRNNAE--STVRPRREANSSERGSPGIRREPTLTRRPSSRKSDS- 349
              A +RSF  P +V R+N++       RRE+ +  R + G+  + +  RRPS+ K ++ 
Sbjct: 417 QGRAITRSFVVPSIVTRDNSDGKDLANSRRESITPARANTGMSLKTSHIRRPSNSKYEAE 476

Query: 348 KLSTAAEPGFVSSKKSGSDISEEPKFHFRFLSINEPTKT 232
           +L  A E G   S  +  D + +  FH R +  +E +++
Sbjct: 477 RLLMAVESGSFDSMPNDLDSAMKQNFHSRLVVDDEASES 515


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