BLASTX nr result

ID: Papaver22_contig00007013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00007013
         (1513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2,...   758   0.0  
ref|XP_003599947.1| Tryptophan synthase beta chain [Medicago tru...   754   0.0  
ref|XP_003551899.1| PREDICTED: tryptophan synthase beta chain 2,...   752   0.0  
ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2,...   751   0.0  
sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta ch...   750   0.0  

>ref|XP_003519001.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
            [Glycine max]
          Length = 479

 Score =  758 bits (1957), Expect = 0.0
 Identities = 376/411 (91%), Positives = 395/411 (96%), Gaps = 3/411 (0%)
 Frame = +2

Query: 239  EEKSKM---STVSQRPDSFGRFGKFGGKYVPETLMYALTELESAFRSLAADQDFQEELSG 409
            EE SKM   S + QRPDSFGRFGKFGGKYVPETLM+ALTELE+AF SL+AD++FQ+EL+G
Sbjct: 69   EEHSKMDNGSVLLQRPDSFGRFGKFGGKYVPETLMHALTELEAAFYSLSADEEFQKELAG 128

Query: 410  ILKDYVGRETPLYLAERLTEHYKSANGEGPHIYFKREDLNHTGAHKINNAVAQALLAKRL 589
            ILKDYVGRE+PLY AERLTEHYK  NGEGPHIY KREDLNHTGAHKINNAVAQALLAKRL
Sbjct: 129  ILKDYVGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHTGAHKINNAVAQALLAKRL 188

Query: 590  GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAMDMERQALNVFRMRLLGAEVRPVHS 769
            GKKRIIAETGAGQHGVATATVCARFGLECIIYMGA DMERQALNVFRMRLLGAEVRPVHS
Sbjct: 189  GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS 248

Query: 770  GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAMEKWG 949
            GTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVREFHAVIGKETRKQA+EKWG
Sbjct: 249  GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWG 308

Query: 950  GIPDVLVACVGGGSNAMGLFHEFVDDKEVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHG 1129
            G PD+L+ACVGGGSNAMGLF+EFVDDK+VRLIGVEAAGFGLDSGKHAATLTKGEVGVLHG
Sbjct: 309  GKPDILIACVGGGSNAMGLFNEFVDDKDVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHG 368

Query: 1130 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDLGRAEYYSITDEEALEAFKRVSR 1309
            AMSYLLQDDDGQI+EPHSISAGLDYPGVGPEHSFLKDLGRAEY+SITDEEALEAFKRVSR
Sbjct: 369  AMSYLLQDDDGQIVEPHSISAGLDYPGVGPEHSFLKDLGRAEYHSITDEEALEAFKRVSR 428

Query: 1310 LEGIIPALETSHALAYLEKLCPTLPDGTKVVVNFSGRGDKDVHTAIKHLKL 1462
            LEGIIPALETSHALAYLEK+CPTLP+G KVVVNFSGRGDKDV TAIK LKL
Sbjct: 429  LEGIIPALETSHALAYLEKVCPTLPNGAKVVVNFSGRGDKDVQTAIKCLKL 479


>ref|XP_003599947.1| Tryptophan synthase beta chain [Medicago truncatula]
            gi|355488995|gb|AES70198.1| Tryptophan synthase beta
            chain [Medicago truncatula]
          Length = 466

 Score =  754 bits (1946), Expect = 0.0
 Identities = 368/402 (91%), Positives = 389/402 (96%)
 Frame = +2

Query: 257  STVSQRPDSFGRFGKFGGKYVPETLMYALTELESAFRSLAADQDFQEELSGILKDYVGRE 436
            S V QRPDSFGRFGKFGGKYVPETLM+ALT LE++F SLA D+DFQ+EL+GILKDYVGRE
Sbjct: 65   SVVLQRPDSFGRFGKFGGKYVPETLMHALTLLEASFHSLAGDEDFQKELAGILKDYVGRE 124

Query: 437  TPLYLAERLTEHYKSANGEGPHIYFKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAET 616
            TPLY AERLTEHYK+ANGEGPHIY KREDLNHTGAHKINNAVAQALLAK+LGKKRIIAET
Sbjct: 125  TPLYFAERLTEHYKNANGEGPHIYLKREDLNHTGAHKINNAVAQALLAKKLGKKRIIAET 184

Query: 617  GAGQHGVATATVCARFGLECIIYMGAMDMERQALNVFRMRLLGAEVRPVHSGTATLKDAT 796
            GAGQHGVATATVCARFGLECIIYMGA DMERQALNVFRMRLLGAEVRPVH+GTATLKDAT
Sbjct: 185  GAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHAGTATLKDAT 244

Query: 797  SEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAMEKWGGIPDVLVAC 976
            SEAIRDWVTNVE+THYILGSVAGPHPYPMMVREFHAVIGKETRKQA+EKWGG PD+L+AC
Sbjct: 245  SEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGGKPDILIAC 304

Query: 977  VGGGSNAMGLFHEFVDDKEVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDD 1156
            VGGGSNAMGLFHEFVDD +VRLIGVEAAGFGL+SGKHAATLTKGEVGVLHGAMSYLLQDD
Sbjct: 305  VGGGSNAMGLFHEFVDDSDVRLIGVEAAGFGLNSGKHAATLTKGEVGVLHGAMSYLLQDD 364

Query: 1157 DGQIIEPHSISAGLDYPGVGPEHSFLKDLGRAEYYSITDEEALEAFKRVSRLEGIIPALE 1336
            DGQI+EPHSISAGLDYPGVGPEHSFLKDLGRAEY+SITD+EALEAFKRVSRLEGIIPALE
Sbjct: 365  DGQIVEPHSISAGLDYPGVGPEHSFLKDLGRAEYHSITDDEALEAFKRVSRLEGIIPALE 424

Query: 1337 TSHALAYLEKLCPTLPDGTKVVVNFSGRGDKDVHTAIKHLKL 1462
            TSHALAYLEK+CPTLP+GTKVVVNFSGRGDKDV T  K+LKL
Sbjct: 425  TSHALAYLEKICPTLPNGTKVVVNFSGRGDKDVQTVTKYLKL 466


>ref|XP_003551899.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
            [Glycine max]
          Length = 471

 Score =  752 bits (1941), Expect = 0.0
 Identities = 373/411 (90%), Positives = 393/411 (95%), Gaps = 3/411 (0%)
 Frame = +2

Query: 239  EEKSKM---STVSQRPDSFGRFGKFGGKYVPETLMYALTELESAFRSLAADQDFQEELSG 409
            EE  KM   S + QRPDSFGRFGKFGGKYVPETLM+AL++LE+AF SLAAD++FQ EL+G
Sbjct: 61   EEHDKMGNGSVLLQRPDSFGRFGKFGGKYVPETLMHALSQLEAAFYSLAADEEFQTELAG 120

Query: 410  ILKDYVGRETPLYLAERLTEHYKSANGEGPHIYFKREDLNHTGAHKINNAVAQALLAKRL 589
            ILKDYVGRE+PLY AERLTEHYK  NGEGPHIY KREDLNHTGAHKINNAVAQALLAKRL
Sbjct: 121  ILKDYVGRESPLYFAERLTEHYKRPNGEGPHIYLKREDLNHTGAHKINNAVAQALLAKRL 180

Query: 590  GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAMDMERQALNVFRMRLLGAEVRPVHS 769
            GKKRIIAETGAGQHGVATATVCARFGLECIIYMGA DMERQALNVFRMRLLGAEVRPVHS
Sbjct: 181  GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHS 240

Query: 770  GTATLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAMEKWG 949
            GTATLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVREFHAVIGKETRKQA+EKWG
Sbjct: 241  GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWG 300

Query: 950  GIPDVLVACVGGGSNAMGLFHEFVDDKEVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHG 1129
            G PDVL+ACVGGGSNA+GLF+EFVDDK+VRLIGVEAAGFGLDSGKHAATLTKGEVGVLHG
Sbjct: 301  GKPDVLIACVGGGSNAIGLFNEFVDDKDVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHG 360

Query: 1130 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDLGRAEYYSITDEEALEAFKRVSR 1309
            AMSYLLQDDDGQI+EPHSISAGLDYPGVGPEHSFLKDLGRAEY+SITDEEALEAFKRVSR
Sbjct: 361  AMSYLLQDDDGQIVEPHSISAGLDYPGVGPEHSFLKDLGRAEYHSITDEEALEAFKRVSR 420

Query: 1310 LEGIIPALETSHALAYLEKLCPTLPDGTKVVVNFSGRGDKDVHTAIKHLKL 1462
            LEGIIPALETSHALAYLEK+CPTL +G KVVVNFSGRGDKDV TAIK+LKL
Sbjct: 421  LEGIIPALETSHALAYLEKVCPTLANGAKVVVNFSGRGDKDVQTAIKYLKL 471


>ref|XP_004157148.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
            [Cucumis sativus]
          Length = 472

 Score =  751 bits (1938), Expect = 0.0
 Identities = 366/408 (89%), Positives = 394/408 (96%)
 Frame = +2

Query: 239  EEKSKMSTVSQRPDSFGRFGKFGGKYVPETLMYALTELESAFRSLAADQDFQEELSGILK 418
            E+K   S++ QRPDSFGRFG+FGGKYVPETLM+ALTELE+AF SLA DQDFQ+EL GIL+
Sbjct: 65   EDKVHDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELDGILR 124

Query: 419  DYVGRETPLYLAERLTEHYKSANGEGPHIYFKREDLNHTGAHKINNAVAQALLAKRLGKK 598
            DYVGRE+PLY AERLTEHY+ +NGEGPHI+ KREDLNHTGAHKINNAVAQALLAKRLGKK
Sbjct: 125  DYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKK 184

Query: 599  RIIAETGAGQHGVATATVCARFGLECIIYMGAMDMERQALNVFRMRLLGAEVRPVHSGTA 778
            RIIAETGAGQHGVATATVCARFGLECIIYMGA DMERQALNVFRM+LLGAEVRPVHSGTA
Sbjct: 185  RIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVHSGTA 244

Query: 779  TLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAMEKWGGIP 958
            TLKDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVR+FHAVIGKETRKQA+EKWGG P
Sbjct: 245  TLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKP 304

Query: 959  DVLVACVGGGSNAMGLFHEFVDDKEVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMS 1138
            DVLVACVGGGSNAMGLFHEFV+DK+VRL+GVEAAGFGLDSGKHAATLTKGEVGVLHGAMS
Sbjct: 305  DVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHGAMS 364

Query: 1139 YLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDLGRAEYYSITDEEALEAFKRVSRLEG 1318
            YLLQDDDGQIIEPHSISAGLDYPGVGPEHS+LKDLGRAEY+S+TD+EALEAFKR+SRLEG
Sbjct: 365  YLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLSRLEG 424

Query: 1319 IIPALETSHALAYLEKLCPTLPDGTKVVVNFSGRGDKDVHTAIKHLKL 1462
            IIPALETSHALAYLEKLCPTLPDGTKVV+N SGRGDKDV TAIK+L++
Sbjct: 425  IIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 472


>sp|O50046.1|TRPB_CAMAC RecName: Full=Tryptophan synthase beta chain 2, chloroplastic; Flags:
            Precursor gi|2792520|gb|AAB97087.1| tryptophan synthase
            beta subunit [Camptotheca acuminata]
            gi|2801771|gb|AAB97526.1| tryptophan synthase beta
            [Camptotheca acuminata]
          Length = 466

 Score =  750 bits (1936), Expect = 0.0
 Identities = 370/408 (90%), Positives = 386/408 (94%)
 Frame = +2

Query: 239  EEKSKMSTVSQRPDSFGRFGKFGGKYVPETLMYALTELESAFRSLAADQDFQEELSGILK 418
            E   +   V QRPDSFGRFGKFGGKYVPETLMYALTELESAFRSL+ DQ FQ+EL GILK
Sbjct: 59   ERSEREPDVLQRPDSFGRFGKFGGKYVPETLMYALTELESAFRSLSGDQVFQKELDGILK 118

Query: 419  DYVGRETPLYLAERLTEHYKSANGEGPHIYFKREDLNHTGAHKINNAVAQALLAKRLGKK 598
            DYVGRE+PLY AERLT HYK  NGEGP IY KREDLNHTGAHKINNAVAQALLAKRLGKK
Sbjct: 119  DYVGRESPLYFAERLTLHYKRPNGEGPEIYLKREDLNHTGAHKINNAVAQALLAKRLGKK 178

Query: 599  RIIAETGAGQHGVATATVCARFGLECIIYMGAMDMERQALNVFRMRLLGAEVRPVHSGTA 778
            RIIAETGAGQHGVATATVCARFGL+C+IYMGA DMERQALNVFRMRLLGAEVR VHSGTA
Sbjct: 179  RIIAETGAGQHGVATATVCARFGLQCVIYMGAQDMERQALNVFRMRLLGAEVRAVHSGTA 238

Query: 779  TLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQAMEKWGGIP 958
            TLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQA+EKWGG P
Sbjct: 239  TLKDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGGKP 298

Query: 959  DVLVACVGGGSNAMGLFHEFVDDKEVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMS 1138
            DVLVACVGGGSNAMGLFHEFVDDK+VR+IGVEAAGFGLDSGKHAATLTKGEVGVLHGAMS
Sbjct: 299  DVLVACVGGGSNAMGLFHEFVDDKDVRMIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMS 358

Query: 1139 YLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDLGRAEYYSITDEEALEAFKRVSRLEG 1318
            YLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKD+GRAEYY  TDEEALEAFKR+SRLEG
Sbjct: 359  YLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDIGRAEYYCCTDEEALEAFKRLSRLEG 418

Query: 1319 IIPALETSHALAYLEKLCPTLPDGTKVVVNFSGRGDKDVHTAIKHLKL 1462
            IIPALETSHALA+LEKLCPTLP+GTKVV+N SGRGDKDVHTAIKHL++
Sbjct: 419  IIPALETSHALAFLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKHLQV 466


Top