BLASTX nr result

ID: Papaver22_contig00006319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00006319
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum t...   296   2e-78
ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum l...   295   9e-78
ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...   295   9e-78
ref|XP_004147576.1| PREDICTED: 40S ribosomal protein S13-like [C...   292   5e-77
ref|XP_002266109.1| PREDICTED: 40S ribosomal protein S13 [Vitis ...   292   5e-77

>gb|ABB86273.1| cytoplasmic ribosomal protein S13-like [Solanum tuberosum]
          Length = 151

 Score =  296 bits (759), Expect = 2e-78
 Identities = 147/151 (97%), Positives = 150/151 (99%)
 Frame = -2

Query: 668 MGRMHSSGKGISSSALPYKRTPPSWLKISSPDVEDNICKFAKKGLTPSQIGVILRDSHGI 489
           MGRMHS GKGIS+SALPYKRTPPSWLKIS+PDVEDNICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 488 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 309
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 308 RIHRLARYYKRTKKLPPVWKYESTTASTLVA 216
           RIHRLARYYK+TKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|NP_001234162.1| cytoplasmic ribosomal protein S13 [Solanum lycopersicum]
           gi|68449762|gb|AAY97868.1| cytoplasmic ribosomal protein
           S13 [Solanum lycopersicum]
          Length = 151

 Score =  295 bits (754), Expect = 9e-78
 Identities = 146/151 (96%), Positives = 149/151 (98%)
 Frame = -2

Query: 668 MGRMHSSGKGISSSALPYKRTPPSWLKISSPDVEDNICKFAKKGLTPSQIGVILRDSHGI 489
           MGRMHS GKGIS+SALPYKR PPSWLKIS+PDVEDNICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRAPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 488 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 309
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 308 RIHRLARYYKRTKKLPPVWKYESTTASTLVA 216
           RIHRLARYYK+TKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|147820740|emb|CAN69640.1| hypothetical protein
           VITISV_028568 [Vitis vinifera]
           gi|296089171|emb|CBI38874.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  295 bits (754), Expect = 9e-78
 Identities = 147/151 (97%), Positives = 149/151 (98%)
 Frame = -2

Query: 668 MGRMHSSGKGISSSALPYKRTPPSWLKISSPDVEDNICKFAKKGLTPSQIGVILRDSHGI 489
           MGRMHS GKGISSSALPYKRTPPSWLKISS DVE+NICKFAKKG+TPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGI 60

Query: 488 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 309
           AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 308 RIHRLARYYKRTKKLPPVWKYESTTASTLVA 216
           RIHRLARYYKRTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKRTKKLPPVWKYESTTASTLVA 151


>ref|XP_004147576.1| PREDICTED: 40S ribosomal protein S13-like [Cucumis sativus]
           gi|449506113|ref|XP_004162657.1| PREDICTED: 40S
           ribosomal protein S13-like [Cucumis sativus]
          Length = 151

 Score =  292 bits (748), Expect = 5e-77
 Identities = 145/151 (96%), Positives = 149/151 (98%)
 Frame = -2

Query: 668 MGRMHSSGKGISSSALPYKRTPPSWLKISSPDVEDNICKFAKKGLTPSQIGVILRDSHGI 489
           MGRMHS GKGIS+SALPYKRTPPSWLKISS DVEDNICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 488 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 309
           AQVKSVTG+KILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGNKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVES 120

Query: 308 RIHRLARYYKRTKKLPPVWKYESTTASTLVA 216
           RIHRLARYYK+TKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151


>ref|XP_002266109.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
           gi|296084140|emb|CBI24528.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  292 bits (748), Expect = 5e-77
 Identities = 145/151 (96%), Positives = 147/151 (97%)
 Frame = -2

Query: 668 MGRMHSSGKGISSSALPYKRTPPSWLKISSPDVEDNICKFAKKGLTPSQIGVILRDSHGI 489
           MGRMHS GKGISSSALPYKRTPP+WLKISS DVEDNICKFAKKGLTPSQIGVILRDSHGI
Sbjct: 1   MGRMHSRGKGISSSALPYKRTPPTWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGI 60

Query: 488 AQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 309
           AQVKSVTGSKILR+LK HGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES
Sbjct: 61  AQVKSVTGSKILRVLKGHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120

Query: 308 RIHRLARYYKRTKKLPPVWKYESTTASTLVA 216
           RIHRL RYYKRTKKLPPVWKYESTTASTLVA
Sbjct: 121 RIHRLGRYYKRTKKLPPVWKYESTTASTLVA 151


Top