BLASTX nr result

ID: Papaver22_contig00006032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00006032
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g...   278   5e-73
emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]   272   4e-71
ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g...   218   6e-55
ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleop...   216   2e-54
ref|NP_175569.1| RNA-binding KH domain-containing protein [Arabi...   209   3e-52

>ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
           gi|297735779|emb|CBI18466.3| unnamed protein product
           [Vitis vinifera]
          Length = 704

 Score =  278 bits (712), Expect = 5e-73
 Identities = 144/200 (72%), Positives = 164/200 (82%), Gaps = 3/200 (1%)
 Frame = +1

Query: 1   GQVDQFPSRGYPPGTHSLDYHSRGF---PGSEGIGASHRMVPEKEIVFRMLCHLDKVGSL 171
           GQ+D FP RGY    H  DYHSRG+   PG E IGA+HRMV E+E+VF++LCH +KVGSL
Sbjct: 283 GQLDSFPQRGYGSSLHGPDYHSRGYSSMPGPENIGANHRMVLEEEVVFKLLCHFEKVGSL 342

Query: 172 IGKGGSIIRALQSDTGASIKIADAEPDSDERVVLISARENSEQRHSSVQDAVIRVQSRIA 351
           IGKGGSIIR LQS+TGASIKIADA PDSDERVV+ISAREN EQ+HS  QDAVIRV  RIA
Sbjct: 343 IGKGGSIIRFLQSETGASIKIADAAPDSDERVVVISARENLEQKHSPAQDAVIRVHCRIA 402

Query: 352 EVGFEPGAAIVARLLVPSQQIGCLLGKGGSIIAEMRRSAGACQYTYFTNERVPKCDAQND 531
           E+GFEPGAA+VARLLV SQQIGCLLGKGG II+EMRR+ GA     F  E+VPKC +QND
Sbjct: 403 EIGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMRRATGA-SIRIFAKEQVPKCGSQND 461

Query: 532 EVMKVIWSLQSVQDALFHNT 591
           E+++VI SLQSVQDALF  T
Sbjct: 462 ELVQVIGSLQSVQDALFRIT 481



 Score =  101 bits (252), Expect = 1e-19
 Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 43/228 (18%)
 Frame = +1

Query: 25  RGYPPGTHSLDYHSRGFPGSEGIGASHRMVPEKEIVFRMLCHLDKVGSLIGKGGSIIRAL 204
           R  P  T +    +   P     GA+     + +++FR+LC   K G +IGKGG+IIR  
Sbjct: 27  RNQPTATSAASAATSSPPTVVAAGAA-----KPQVLFRILCPATKTGGVIGKGGAIIRQF 81

Query: 205 QSDTGASIKIADAEPDSDERVVLI------SARENS------------------------ 294
           + DTGA I+I D+    DERV+LI      S RE S                        
Sbjct: 82  REDTGAKIRIDDSVLGCDERVILIVADAVKSKREASAICGAEANDGEESANLSNSSPNPV 141

Query: 295 ---EQRHSSVQDAVIRVQSRIAEVGFEP----------GAAIVARLLVPSQQIGCLLGKG 435
              +   S  Q A++RV  RI +V  E             A+  RLL PS Q+GC+LG+G
Sbjct: 142 AVDDDESSPAQQALVRVFERILKVDEEREEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRG 201

Query: 436 GSIIAEMRRSAGACQYTYFTNERVPKCDAQNDEVMKVIWSLQSVQDAL 579
           G I+ ++R+ +GA Q      + +P C +  DE++++  +  +V+ AL
Sbjct: 202 GKIVEKIRQESGA-QIRVLPKDHIPACASPGDELIQITGTFPAVRKAL 248


>emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]
          Length = 807

 Score =  272 bits (696), Expect = 4e-71
 Identities = 143/202 (70%), Positives = 163/202 (80%), Gaps = 8/202 (3%)
 Frame = +1

Query: 1   GQVDQFPSRGYPPGTHSLDYHSRGF---PGSEGIGASHRMVPEKEIVFRMLCHLDKVGSL 171
           GQ+D FP RGY    H  DYHSRG+   PG E IGA+HRMV E+E+VF++LCH +KVGSL
Sbjct: 379 GQLDSFPQRGYGSSLHGPDYHSRGYSSMPGPENIGANHRMVLEEEVVFKLLCHFEKVGSL 438

Query: 172 IGKGGSIIRALQSDTGASIKIADAEPDSDERVVLISARE-----NSEQRHSSVQDAVIRV 336
           IGKGGSIIR LQS+TGASIKIADA PDSDERVV+ISARE     N EQ+HS  QDAVIRV
Sbjct: 439 IGKGGSIIRXLQSETGASIKIADAAPDSDERVVVISAREACTLTNXEQKHSPAQDAVIRV 498

Query: 337 QSRIAEVGFEPGAAIVARLLVPSQQIGCLLGKGGSIIAEMRRSAGACQYTYFTNERVPKC 516
             RIAE+GFEPGAA+VARLLV SQQIGCLLGKGG II+EMRR+ GA     F  E+VPKC
Sbjct: 499 HCRIAEIGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMRRATGA-SIRIFAKEQVPKC 557

Query: 517 DAQNDEVMKVIWSLQSVQDALF 582
            +QNDE+++VI SLQSVQDALF
Sbjct: 558 GSQNDELVQVIGSLQSVQDALF 579



 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 62/183 (33%), Positives = 91/183 (49%), Gaps = 43/183 (23%)
 Frame = +1

Query: 124 EIVFRMLCHLDKVGSLIGKGGSIIRALQSDTGASIKIADAEPDSDERVVLI------SAR 285
           +++FR+LC   K G +IGKGG+IIR  + DTGA I+I D+    DERV+LI      S R
Sbjct: 55  QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKR 114

Query: 286 ENS---------------------------EQRHSSVQDAVIRVQSRIAEVGFEP----- 369
           E S                           +   S  Q A++RV  RI +V  E      
Sbjct: 115 EASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEK 174

Query: 370 -----GAAIVARLLVPSQQIGCLLGKGGSIIAEMRRSAGACQYTYFTNERVPKCDAQNDE 534
                  A+  RLL PS Q+GC+LG+GG I+ ++R+ +GA Q      + +P C +  DE
Sbjct: 175 KEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGA-QIRVLPKDHIPACASPGDE 233

Query: 535 VMK 543
           +++
Sbjct: 234 LIQ 236


>ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 559

 Score =  218 bits (556), Expect = 6e-55
 Identities = 113/180 (62%), Positives = 144/180 (80%)
 Frame = +1

Query: 52  LDYHSRGFPGSEGIGASHRMVPEKEIVFRMLCHLDKVGSLIGKGGSIIRALQSDTGASIK 231
           LD+HSRG        +SHRM  E+++VF++LCH +KVGSLIGKGGS++RALQ++TGASI+
Sbjct: 169 LDHHSRGCYSESAGHSSHRMFLEEDVVFKLLCHHEKVGSLIGKGGSVVRALQNETGASIQ 228

Query: 232 IADAEPDSDERVVLISARENSEQRHSSVQDAVIRVQSRIAEVGFEPGAAIVARLLVPSQQ 411
           I +A PDSDERVV+ISARE SEQ+HS  Q+AVIRV  R+ E+GFEP AA+VA+LLV S Q
Sbjct: 229 IVEAGPDSDERVVVISARETSEQKHSPAQEAVIRVHCRLTEIGFEPSAAVVAKLLVRSPQ 288

Query: 412 IGCLLGKGGSIIAEMRRSAGACQYTYFTNERVPKCDAQNDEVMKVIWSLQSVQDALFHNT 591
           +GCLLGKGG +I+EMRR  GA     F+ E++ K  +QN+EV++VI SLQSVQDALFH T
Sbjct: 289 VGCLLGKGGLVISEMRRVTGA-SIRIFSKEQI-KYISQNEEVVQVIGSLQSVQDALFHIT 346


>ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Glycine
           max]
          Length = 565

 Score =  216 bits (551), Expect = 2e-54
 Identities = 112/179 (62%), Positives = 143/179 (79%)
 Frame = +1

Query: 55  DYHSRGFPGSEGIGASHRMVPEKEIVFRMLCHLDKVGSLIGKGGSIIRALQSDTGASIKI 234
           D+HSRG        +SHRM  E+E+VF++LC  DKVGSLIGKGGS++RALQ++TGASI+I
Sbjct: 176 DHHSRGAYSESAGHSSHRMFVEEEVVFKLLCRHDKVGSLIGKGGSVVRALQNETGASIQI 235

Query: 235 ADAEPDSDERVVLISARENSEQRHSSVQDAVIRVQSRIAEVGFEPGAAIVARLLVPSQQI 414
            +A PDSDERVV+ISA+E SEQ+HS  Q+AVIRV  R+ E+GFEP AA+VA+LLV S Q+
Sbjct: 236 VEAGPDSDERVVVISAQETSEQKHSPAQEAVIRVHCRLTEIGFEPSAAVVAKLLVRSPQV 295

Query: 415 GCLLGKGGSIIAEMRRSAGACQYTYFTNERVPKCDAQNDEVMKVIWSLQSVQDALFHNT 591
           GCLLGKGG +I+EMRR+ GA     F+ E++ K  +QN+EV++VI SLQSVQDALFH T
Sbjct: 296 GCLLGKGGLVISEMRRATGA-SIRIFSKEQI-KYISQNEEVVQVIGSLQSVQDALFHIT 352



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 38/117 (32%), Positives = 62/117 (52%)
 Frame = +1

Query: 124 EIVFRMLCHLDKVGSLIGKGGSIIRALQSDTGASIKIADAEPDSDERVVLISARENSEQR 303
           + VFR++C   K   +   GG          GA I + D    ++ERVV+I   E     
Sbjct: 18  DAVFRIVCPAAKTADVAAIGGD---------GAKILVEDLV-GAEERVVVIVGDE----- 62

Query: 304 HSSVQDAVIRVQSRIAEVGFEPGAAIVARLLVPSQQIGCLLGKGGSIIAEMRRSAGA 474
            S+ Q A+IRV  R  +   +  + +  +L+ PS Q+GC+LG+GG I+ ++R+ +GA
Sbjct: 63  -SAAQVALIRVLERTMDEETK-NSTVSCKLVAPSYQVGCVLGRGGKIVEKIRQDSGA 117


>ref|NP_175569.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
           gi|12321677|gb|AAG50879.1|AC025294_17 hypothetical
           protein [Arabidopsis thaliana]
           gi|12325367|gb|AAG52626.1|AC024261_13 hypothetical
           protein; 15135-12645 [Arabidopsis thaliana]
           gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis
           thaliana] gi|110735740|dbj|BAE99849.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332194564|gb|AEE32685.1| RNA-binding KH
           domain-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  209 bits (531), Expect(2) = 3e-52
 Identities = 106/194 (54%), Positives = 145/194 (74%), Gaps = 5/194 (2%)
 Frame = +1

Query: 16  FPSRGYPPGTHSLDYHSRGF-----PGSEGIGASHRMVPEKEIVFRMLCHLDKVGSLIGK 180
           FP  GYPP  HS++YH +       P  E +G  +R V E+E+ FR+LC  DKVGSLIGK
Sbjct: 234 FPQPGYPPEYHSMEYHPQWDHPPPNPMPEDVGPFNRPVVEEEVAFRLLCPADKVGSLIGK 293

Query: 181 GGSIIRALQSDTGASIKIADAEPDSDERVVLISARENSEQRHSSVQDAVIRVQSRIAEVG 360
           GG+++RALQ+++GASIK++D   DS+ER+++ISAREN E+RHS  QD V+RV +RI E+G
Sbjct: 294 GGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQDGVMRVHNRIVEIG 353

Query: 361 FEPGAAIVARLLVPSQQIGCLLGKGGSIIAEMRRSAGACQYTYFTNERVPKCDAQNDEVM 540
           FEP AA+VARLLV S  IG LLGKGG +I+EMRR+ GA     F  ++  K ++Q+DE++
Sbjct: 354 FEPSAAVVARLLVHSPYIGRLLGKGGHLISEMRRATGA-SIRVFAKDQATKYESQHDEIV 412

Query: 541 KVIWSLQSVQDALF 582
           +VI +L++VQDALF
Sbjct: 413 QVIGNLKTVQDALF 426



 Score = 22.3 bits (46), Expect(2) = 3e-52
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 602 RLQETSFPMKLPYPNIG 652
           RL+E  FP +LP+  +G
Sbjct: 431 RLREAMFPGRLPFQGMG 447



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 48/212 (22%)
 Frame = +1

Query: 121 KEIVFRMLCHLDKVGSLIGKGGSIIRALQSDTGASIKIADAEP-DSDERVVLISARE--- 288
           + + FR+LC   + G++IGKGGS+IR LQS TG+ I++ D  P  S+ERVVLI A     
Sbjct: 17  ESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 76

Query: 289 -------------------------------NSEQRHSSVQDAVIRVQSRIAEVGFEPGA 375
                                          + E+  SS Q A++RV  RI    F   A
Sbjct: 77  KDESNVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIV---FGDDA 133

Query: 376 AIV-------------ARLLVPSQQIGCLLGKGGSIIAEMRRSAGACQYTYFTNERVPKC 516
           A V              R++V   Q+  L+ KGG +I ++R  +GA      + +++P C
Sbjct: 134 ATVDGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAI-VRISSTDQIPPC 192

Query: 517 DAQNDEVMKVIWSLQSVQDALFHNTGSRQASG 612
               D V+++     SV+ AL   T   Q SG
Sbjct: 193 AFPGDVVIQMNGKFSSVKKALLLVTNCLQESG 224


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