BLASTX nr result

ID: Papaver22_contig00004720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00004720
         (1395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   187   4e-45
ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   184   6e-44
ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   184   6e-44
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   183   8e-44
emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]   183   8e-44

>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
            communis] gi|223534732|gb|EEF36424.1| cleavage and
            polyadenylation specificity factor, putative [Ricinus
            communis]
          Length = 963

 Score =  187 bits (476), Expect = 4e-45
 Identities = 85/113 (75%), Positives = 98/113 (86%)
 Frame = -3

Query: 547  YAVVGQEGASEADLSMLPRYRFQISNNEEKPSTGGGKMVPLTMNGGELADERVLSPEDAE 368
            YAV GQEGASEADLS+LP+YRFQ++  EEKPS G GKMVP+  + G LA+ER+L PEDAE
Sbjct: 852  YAVAGQEGASEADLSILPKYRFQLTVEEEKPSVGAGKMVPIETSSGYLANERILLPEDAE 911

Query: 367  CCICLTSYDDGAEIHGLPCNHHFHQTCIVKWLKINASCPLCKFNILKGSNEQV 209
            CCICL  Y+DGAE+H LPCNHHFH TCIVKWLK+NA+CPLCK+NILKG NEQV
Sbjct: 912  CCICLCPYEDGAELHTLPCNHHFHSTCIVKWLKMNATCPLCKYNILKG-NEQV 963



 Score =  169 bits (429), Expect = 1e-39
 Identities = 86/166 (51%), Positives = 100/166 (60%), Gaps = 10/166 (6%)
 Frame = -2

Query: 1142 LVRETAASQLEERRIDWGYSKPVVALDIAWNLAFTIVSVVFLGCTFDEKPNTPIRIWILG 963
            LVRETAA +LEERR DWGYSKPVVALD+ WN AF +VS+  L  +  EKPNTPIRIWI G
Sbjct: 644  LVRETAALELEERRADWGYSKPVVALDMVWNTAFVVVSITMLILSVKEKPNTPIRIWICG 703

Query: 962  YAIQCVIHVVMVWSEYHXXXXXXXXXSVE----------DGGGNRXXXXXXXXXXXXXXX 813
            YA+QC++HVV+VW EY                       +G                   
Sbjct: 704  YALQCLVHVVLVWIEYRRRNSRRVRDEERQQQQQQQAEVEGQHEENEGENVDSEDEDGVD 763

Query: 812  XXXXGFRRSSAAKRCESLNTIASFVWWIAGFYWVVSGGEILLQNAP 675
                   RSS  KRCES+NT+ASF+WWI GFYWVVSGG+ LLQNAP
Sbjct: 764  RASVTSNRSSVIKRCESVNTMASFLWWIVGFYWVVSGGDELLQNAP 809


>ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 2 [Glycine
           max]
          Length = 334

 Score =  184 bits (466), Expect = 6e-44
 Identities = 81/113 (71%), Positives = 97/113 (85%)
 Frame = -3

Query: 547 YAVVGQEGASEADLSMLPRYRFQISNNEEKPSTGGGKMVPLTMNGGELADERVLSPEDAE 368
           YAV GQEGASE+DLS+LP+YRFQ+ +NEE P  GGG M+P+  + G   +ER LSPEDAE
Sbjct: 223 YAVAGQEGASESDLSILPKYRFQLLSNEETPGEGGGSMIPMETSNGYSVNERTLSPEDAE 282

Query: 367 CCICLTSYDDGAEIHGLPCNHHFHQTCIVKWLKINASCPLCKFNILKGSNEQV 209
           CCIC++SY+DGAE+H LPCNHHFH TCIVKWLK+NA+CPLCK+NILKG NEQV
Sbjct: 283 CCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYNILKG-NEQV 334



 Score =  160 bits (404), Expect = 1e-36
 Identities = 80/157 (50%), Positives = 96/157 (61%)
 Frame = -2

Query: 1142 LVRETAASQLEERRIDWGYSKPVVALDIAWNLAFTIVSVVFLGCTFDEKPNTPIRIWILG 963
            +VRETAA +LEERR DW YSKPVVALDI WN+AF +VS V L CT  E PNTPIR WI G
Sbjct: 40   VVRETAARELEERRADWTYSKPVVALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICG 99

Query: 962  YAIQCVIHVVMVWSEYHXXXXXXXXXSVEDGGGNRXXXXXXXXXXXXXXXXXXXGFRRSS 783
            YA+QC++HV +VW EY            E+   +                        + 
Sbjct: 100  YALQCLVHVALVWLEYRRRNDAPRD---EESAASLQYDDVNDSD------------EDAR 144

Query: 782  AAKRCESLNTIASFVWWIAGFYWVVSGGEILLQNAPR 672
              KRC SLNT+ S +WW+ GFYWVVSGG+ILLQ+APR
Sbjct: 145  FTKRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPR 181


>ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine
           max]
          Length = 344

 Score =  184 bits (466), Expect = 6e-44
 Identities = 81/113 (71%), Positives = 97/113 (85%)
 Frame = -3

Query: 547 YAVVGQEGASEADLSMLPRYRFQISNNEEKPSTGGGKMVPLTMNGGELADERVLSPEDAE 368
           YAV GQEGASE+DLS+LP+YRFQ+ +NEE P  GGG M+P+  + G   +ER LSPEDAE
Sbjct: 233 YAVAGQEGASESDLSILPKYRFQLLSNEETPGEGGGSMIPMETSNGYSVNERTLSPEDAE 292

Query: 367 CCICLTSYDDGAEIHGLPCNHHFHQTCIVKWLKINASCPLCKFNILKGSNEQV 209
           CCIC++SY+DGAE+H LPCNHHFH TCIVKWLK+NA+CPLCK+NILKG NEQV
Sbjct: 293 CCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYNILKG-NEQV 344



 Score =  162 bits (411), Expect = 1e-37
 Identities = 81/157 (51%), Positives = 94/157 (59%)
 Frame = -2

Query: 1142 LVRETAASQLEERRIDWGYSKPVVALDIAWNLAFTIVSVVFLGCTFDEKPNTPIRIWILG 963
            +VRETAA +LEERR DW YSKPVVALDI WN+AF +VS V L CT  E PNTPIR WI G
Sbjct: 40   VVRETAARELEERRADWTYSKPVVALDITWNMAFVLVSAVMLACTVKENPNTPIRWWICG 99

Query: 962  YAIQCVIHVVMVWSEYHXXXXXXXXXSVEDGGGNRXXXXXXXXXXXXXXXXXXXGFRRSS 783
            YA+QC++HV +VW EY             D                            S 
Sbjct: 100  YALQCLVHVALVWLEYRRRNDAP-----RDEESAASLQYDDVNDSDEDDVGTSGSSSSSG 154

Query: 782  AAKRCESLNTIASFVWWIAGFYWVVSGGEILLQNAPR 672
              KRC SLNT+ S +WW+ GFYWVVSGG+ILLQ+APR
Sbjct: 155  FTKRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPR 191


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  183 bits (465), Expect = 8e-44
 Identities = 89/157 (56%), Positives = 104/157 (66%)
 Frame = -2

Query: 1142 LVRETAASQLEERRIDWGYSKPVVALDIAWNLAFTIVSVVFLGCTFDEKPNTPIRIWILG 963
            LVRETAA +LEERR DWGYSKPVVALD+ WN++F IVS+V L CT  E+PNTPIR+WI G
Sbjct: 1991 LVRETAARELEERRADWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICG 2050

Query: 962  YAIQCVIHVVMVWSEYHXXXXXXXXXSVEDGGGNRXXXXXXXXXXXXXXXXXXXGFRRSS 783
            YA+QC +HVV+VW EY            +                         GF +SS
Sbjct: 2051 YALQCGVHVVLVWLEYRRRNRRRVRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSS 2110

Query: 782  AAKRCESLNTIASFVWWIAGFYWVVSGGEILLQNAPR 672
              KRCES+NT+ASF+WWI GFYWVVSGGE LLQNAPR
Sbjct: 2111 VTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPR 2147



 Score =  182 bits (462), Expect = 2e-43
 Identities = 81/111 (72%), Positives = 94/111 (84%)
 Frame = -3

Query: 547  YAVVGQEGASEADLSMLPRYRFQISNNEEKPSTGGGKMVPLTMNGGELADERVLSPEDAE 368
            YAV GQEGASEADLSMLPRYRF+ +NNEEK   G G M+P   + G LA+ER+L PEDAE
Sbjct: 2189 YAVAGQEGASEADLSMLPRYRFE-ANNEEKSGVGAGTMIPTETSSGYLANERILLPEDAE 2247

Query: 367  CCICLTSYDDGAEIHGLPCNHHFHQTCIVKWLKINASCPLCKFNILKGSNE 215
            CCICL+SY+DGAE+H LPCNHHFH TCI KWLK+NA+CPLCK+NILKGS +
Sbjct: 2248 CCICLSSYEDGAELHALPCNHHFHSTCIAKWLKMNATCPLCKYNILKGSEQ 2298


>emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
          Length = 361

 Score =  183 bits (465), Expect = 8e-44
 Identities = 89/157 (56%), Positives = 104/157 (66%)
 Frame = -2

Query: 1142 LVRETAASQLEERRIDWGYSKPVVALDIAWNLAFTIVSVVFLGCTFDEKPNTPIRIWILG 963
            LVRETAA +LEERR DWGYSKPVVALD+ WN++F IVS+V L CT  E+PNTPIR+WI G
Sbjct: 47   LVRETAARELEERRADWGYSKPVVALDMMWNMSFVIVSIVMLICTARERPNTPIRLWICG 106

Query: 962  YAIQCVIHVVMVWSEYHXXXXXXXXXSVEDGGGNRXXXXXXXXXXXXXXXXXXXGFRRSS 783
            YA+QC +HVV+VW EY            +                         GF +SS
Sbjct: 107  YALQCGVHVVLVWLEYRRRSRRRVRDEEQQQQPQHSDSDVNDSEDEDGNSSASGGFNQSS 166

Query: 782  AAKRCESLNTIASFVWWIAGFYWVVSGGEILLQNAPR 672
              KRCES+NT+ASF+WWI GFYWVVSGGE LLQNAPR
Sbjct: 167  VTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPR 203



 Score =  166 bits (419), Expect = 2e-38
 Identities = 74/101 (73%), Positives = 84/101 (83%)
 Frame = -3

Query: 547 YAVVGQEGASEADLSMLPRYRFQISNNEEKPSTGGGKMVPLTMNGGELADERVLSPEDAE 368
           YAV GQEGASEADLSMLPRYRF+ +NNEEK   G G M P   + G LA+ER+L PEDAE
Sbjct: 245 YAVAGQEGASEADLSMLPRYRFE-ANNEEKSGVGAGTMFPTETSSGYLANERILLPEDAE 303

Query: 367 CCICLTSYDDGAEIHGLPCNHHFHQTCIVKWLKINASCPLC 245
           CCICL+SY+DGAE+H LPCNHHFH TCI KWLK+NA+CPLC
Sbjct: 304 CCICLSSYEDGAELHALPCNHHFHSTCIAKWLKMNATCPLC 344


Top