BLASTX nr result

ID: Papaver22_contig00004608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00004608
         (1458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273712.2| PREDICTED: transcription initiation factor T...   157   5e-36
emb|CBI21835.3| unnamed protein product [Vitis vinifera]              157   5e-36
ref|XP_002522626.1| transcription initiation factor tfiid, putat...   145   3e-32
ref|XP_003533464.1| PREDICTED: transcription initiation factor T...   137   5e-30
ref|XP_003523903.1| PREDICTED: transcription initiation factor T...   137   7e-30

>ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Vitis vinifera]
          Length = 2068

 Score =  157 bits (398), Expect = 5e-36
 Identities = 136/406 (33%), Positives = 174/406 (42%), Gaps = 72/406 (17%)
 Frame = -3

Query: 1153 KMRRHPTQVQXXXXXXXXXXXXXELCRMLMDDNGAXXXXXXKTVVRGREE---LGSSWQR 983
            KMRR P+Q Q             ELCRMLMDD+ A      KT   G EE   LGS    
Sbjct: 1413 KMRRRPSQAQAEEEIEDEAAEAAELCRMLMDDDEAERKKKKKTRPVGEEEGLALGSQLNF 1472

Query: 982  GL-SAERINKANGSVKQVSRIAQPDASFTSMENIIRDQKEVDN-IRKRNSSGVIKSKKLK 809
            G  + +++ K +  VKQ+    QPD S++  E   RD KEV++ + KRN SG  K  K K
Sbjct: 1473 GFENGQKMKKNSAVVKQLVSKVQPDGSYSQKEKAFRDSKEVESFLPKRNISGKAKILK-K 1531

Query: 808  NDKVR---------------EKHPSGKNVREGFVCGACGQAGHMRTNKNCPRYGEDSDTH 674
            ND  R               +     K+ RE FVCGACGQ GHMRTNKNCP+YGED +  
Sbjct: 1532 NDAARMGVLHKKIKIMGDGIKMFKEKKSARESFVCGACGQLGHMRTNKNCPKYGEDLEAQ 1591

Query: 673  VENSGLERIPGKLNLHDSSAQXXXXXXXXXXXIAARNVPA-----EAQEKIEKAKTFQLK 509
            VE +  E+   K +  + SAQ             +    A     E ++   KAK   +K
Sbjct: 1592 VEITEPEKASVKSSSLEHSAQLQQRTLIKKIIPKSATKMALVETSEGEKSSLKAKNLPVK 1651

Query: 508  LKCA----LPDKSLEQNTTATQSSDKQDEMGSRSVSKYSKIIISNTMKVEDFHGEPQK-- 347
             KC     LPDK     T         D        K +KIIISN MK ED   E  K  
Sbjct: 1652 FKCGSADRLPDKVAPGTTHGPDQPVISDAETGNKFVKVNKIIISNKMKPEDSQVESHKPS 1711

Query: 346  -----------------QPSIVIRPPLNIE------------------------XXXXXX 290
                             +PSIVIRPP  I+                              
Sbjct: 1712 IVIRPPTETDKEHVESHKPSIVIRPPSEIDRDQVESHKPSIVIRPPVDTDRDQPRKKIII 1771

Query: 289  XXXXXXKVDQVRDEVRYGMQEEHRKTEKMMQLSSYEILRKQEQKRL 152
                   +DQV  +   G+  E+RKT+K+++LSS+E  +K E K L
Sbjct: 1772 KRPKEISLDQVSQDGSTGL--EYRKTKKIVELSSFEKHKKPETKHL 1815



 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 39/46 (84%), Positives = 42/46 (91%)
 Frame = -1

Query: 1458 FLQLQQQAREKCQEIWDRQLQNLSAAEGDENESDSEANSDLDSFAG 1321
            FLQLQQQ REKCQEIWDRQ+Q+LSA + DE ESDSEANSDLDSFAG
Sbjct: 1335 FLQLQQQTREKCQEIWDRQVQSLSAVDSDEIESDSEANSDLDSFAG 1380


>emb|CBI21835.3| unnamed protein product [Vitis vinifera]
          Length = 1798

 Score =  157 bits (398), Expect = 5e-36
 Identities = 136/406 (33%), Positives = 174/406 (42%), Gaps = 72/406 (17%)
 Frame = -3

Query: 1153 KMRRHPTQVQXXXXXXXXXXXXXELCRMLMDDNGAXXXXXXKTVVRGREE---LGSSWQR 983
            KMRR P+Q Q             ELCRMLMDD+ A      KT   G EE   LGS    
Sbjct: 1143 KMRRRPSQAQAEEEIEDEAAEAAELCRMLMDDDEAERKKKKKTRPVGEEEGLALGSQLNF 1202

Query: 982  GL-SAERINKANGSVKQVSRIAQPDASFTSMENIIRDQKEVDN-IRKRNSSGVIKSKKLK 809
            G  + +++ K +  VKQ+    QPD S++  E   RD KEV++ + KRN SG  K  K K
Sbjct: 1203 GFENGQKMKKNSAVVKQLVSKVQPDGSYSQKEKAFRDSKEVESFLPKRNISGKAKILK-K 1261

Query: 808  NDKVR---------------EKHPSGKNVREGFVCGACGQAGHMRTNKNCPRYGEDSDTH 674
            ND  R               +     K+ RE FVCGACGQ GHMRTNKNCP+YGED +  
Sbjct: 1262 NDAARMGVLHKKIKIMGDGIKMFKEKKSARESFVCGACGQLGHMRTNKNCPKYGEDLEAQ 1321

Query: 673  VENSGLERIPGKLNLHDSSAQXXXXXXXXXXXIAARNVPA-----EAQEKIEKAKTFQLK 509
            VE +  E+   K +  + SAQ             +    A     E ++   KAK   +K
Sbjct: 1322 VEITEPEKASVKSSSLEHSAQLQQRTLIKKIIPKSATKMALVETSEGEKSSLKAKNLPVK 1381

Query: 508  LKCA----LPDKSLEQNTTATQSSDKQDEMGSRSVSKYSKIIISNTMKVEDFHGEPQK-- 347
             KC     LPDK     T         D        K +KIIISN MK ED   E  K  
Sbjct: 1382 FKCGSADRLPDKVAPGTTHGPDQPVISDAETGNKFVKVNKIIISNKMKPEDSQVESHKPS 1441

Query: 346  -----------------QPSIVIRPPLNIE------------------------XXXXXX 290
                             +PSIVIRPP  I+                              
Sbjct: 1442 IVIRPPTETDKEHVESHKPSIVIRPPSEIDRDQVESHKPSIVIRPPVDTDRDQPRKKIII 1501

Query: 289  XXXXXXKVDQVRDEVRYGMQEEHRKTEKMMQLSSYEILRKQEQKRL 152
                   +DQV  +   G+  E+RKT+K+++LSS+E  +K E K L
Sbjct: 1502 KRPKEISLDQVSQDGSTGL--EYRKTKKIVELSSFEKHKKPETKHL 1545



 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 39/46 (84%), Positives = 42/46 (91%)
 Frame = -1

Query: 1458 FLQLQQQAREKCQEIWDRQLQNLSAAEGDENESDSEANSDLDSFAG 1321
            FLQLQQQ REKCQEIWDRQ+Q+LSA + DE ESDSEANSDLDSFAG
Sbjct: 1065 FLQLQQQTREKCQEIWDRQVQSLSAVDSDEIESDSEANSDLDSFAG 1110


>ref|XP_002522626.1| transcription initiation factor tfiid, putative [Ricinus communis]
            gi|223538102|gb|EEF39713.1| transcription initiation
            factor tfiid, putative [Ricinus communis]
          Length = 1885

 Score =  145 bits (366), Expect = 3e-32
 Identities = 113/309 (36%), Positives = 153/309 (49%), Gaps = 27/309 (8%)
 Frame = -3

Query: 1153 KMRRHPTQVQXXXXXXXXXXXXXELCRMLMDDNGAXXXXXXKTVVRGREELGSSWQRGLS 974
            KMRRHP+Q Q             ELCR+LMDD+ A      KT   G   L +    GL 
Sbjct: 1241 KMRRHPSQAQAEEEIEDEAAEAAELCRLLMDDDEAEQKKKKKTKTAG---LVAGLLPGLK 1297

Query: 973  AERINKANGSVKQVSRIAQPDASFTSMENIIRDQKEVDN--IRKRNSSGVIKSKK----- 815
            +  +N     +KQ  +   P+ SF   E+ I+D KEV+   I+K+ S  V   KK     
Sbjct: 1298 SNFVNSTE-HIKQKDK-GHPNGSFVPKESSIKDSKEVEALFIKKKKSEKVKALKKNGFQD 1355

Query: 814  ------LKNDKVREKHPSGKNVREGFVCGACGQAGHMRTNKNCPRYGEDSDTHVENSGLE 653
                   KN   +EK    K+ RE FVCGACGQ GHMRTNKNCP+YGE+ +  VE + LE
Sbjct: 1356 SSTPPLTKNQIFKEK----KSSREKFVCGACGQLGHMRTNKNCPKYGEEPEAQVEITDLE 1411

Query: 652  RIPGKLNLHDS--SAQXXXXXXXXXXXIAARNVPAEAQEKIEKAKTFQLKLKCALPDKSL 479
            +  GK N  D    +Q            AA+    E ++   KAK   +K  C+  +K+ 
Sbjct: 1412 KSSGKSNSLDPLFKSQQKLQKKKSMLKTAAKVEDPEGEKSSLKAKLLPVKFVCSSTEKNS 1471

Query: 478  EQNTT-ATQSSDK-----------QDEMGSRSVSKYSKIIISNTMKVEDFHGEPQKQPSI 335
            ++    A QSS++           + E GS  V+K SKI ISN  K ED   +  K P+I
Sbjct: 1472 DKPADGAAQSSERPITSDVRPDSSEMETGSMPVAKISKIKISNKAKPEDVQMDVHK-PAI 1530

Query: 334  VIRPPLNIE 308
            VIRPP++ +
Sbjct: 1531 VIRPPMDTD 1539



 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = -1

Query: 1458 FLQLQQQAREKCQEIWDRQLQNLSAAEGDENESDSEANSDLDSFAG 1321
            FLQLQQQ REKCQEIWDRQ+Q+LSA +GDE ESDSEANSDLDSFAG
Sbjct: 1164 FLQLQQQTREKCQEIWDRQVQSLSAVDGDELESDSEANSDLDSFAG 1209


>ref|XP_003533464.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1910

 Score =  137 bits (346), Expect = 5e-30
 Identities = 119/381 (31%), Positives = 176/381 (46%), Gaps = 51/381 (13%)
 Frame = -3

Query: 1153 KMRRHPTQVQXXXXXXXXXXXXXELCRMLMDDNGAXXXXXXKT-VVRGREELGSSWQRGL 977
            KMRR PT  Q             ELCR+LMDD  A      K  V+ G   L    Q   
Sbjct: 1284 KMRRRPTLAQAEEEIEDEAAEAAELCRLLMDDYEADRKKKKKAKVMVGEARLVPKMQSKF 1343

Query: 976  SAERINKANGSVKQVSRIAQPDASFTSMENIIRDQKEVDNI--RKRNSSGVIKSKK---- 815
            S +   +    VKQ++   Q D +    E+ I D +E +N+  +K  S  V K+KK    
Sbjct: 1344 SFDNAEQ----VKQITNTLQLDGTNHLKEDAITDLREEENVPAKKSKSLKVNKAKKNDIM 1399

Query: 814  ----------------LKNDKVREKHPSGKNVREGFVCGACGQAGHMRTNKNCPRYGEDS 683
                            +KN   +EK PS    RE FVCGACG+AGHMRTNKNCP+YGED 
Sbjct: 1400 PISIPNKKIKLNMGEGIKNQVFKEKKPS----RETFVCGACGKAGHMRTNKNCPKYGEDL 1455

Query: 682  DTHVENSGLERIPGKLNLHDSSA--QXXXXXXXXXXXIAARNVPAEAQEKIEKAKTFQLK 509
            +T +E++ +E+  GK +  D S+  Q            A +  P +   KI       LK
Sbjct: 1456 ETQLESADMEKSSGKSSFVDPSSLSQHKAPSKKSMSKSATKVAPVDNSTKIP------LK 1509

Query: 508  LKCALPDKSLEQNTTAT-QSSDKQDEMGSRSV--SKYSKIIISNTMKVEDFHGEPQKQPS 338
             KC+  +KS ++    T QSSDK     S +   +K +KIII   +K +D   E +K  +
Sbjct: 1510 FKCSSTEKSSDKPAVETLQSSDKPVTSDSETAKSAKVNKIIIPKKVKPDDTLAESRKH-A 1568

Query: 337  IVIRPPLN-----IEXXXXXXXXXXXXKVDQVRDEVRYGMQE------------------ 227
            IVIRPP +     ++            ++D+ +   +  ++                   
Sbjct: 1569 IVIRPPTDSGRGQVDSHKFPIKIRPPTEIDREQSHKKIVIKRTKEVIDLELDSPGGNTGL 1628

Query: 226  EHRKTEKMMQLSSYEILRKQE 164
            +HRKT+++++LS++E  +KQE
Sbjct: 1629 QHRKTKRIVELSNFEKQKKQE 1649



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 40/46 (86%), Positives = 42/46 (91%)
 Frame = -1

Query: 1458 FLQLQQQAREKCQEIWDRQLQNLSAAEGDENESDSEANSDLDSFAG 1321
            FLQLQQQ REKCQEIWDRQ+Q+LSA  GDENESDSE NSDLDSFAG
Sbjct: 1206 FLQLQQQTREKCQEIWDRQVQSLSAVNGDENESDSEGNSDLDSFAG 1251


>ref|XP_003523903.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1919

 Score =  137 bits (345), Expect = 7e-30
 Identities = 118/381 (30%), Positives = 175/381 (45%), Gaps = 51/381 (13%)
 Frame = -3

Query: 1153 KMRRHPTQVQXXXXXXXXXXXXXELCRMLMDDNGAXXXXXXKT-VVRGREELGSSWQRGL 977
            KMRRHPT  Q             ELCR+LMDD+ A      K  V+ G   L    Q   
Sbjct: 1294 KMRRHPTLAQAEEEIEDDAAEAAELCRLLMDDDEADKKKKKKAKVIVGEARLVPKMQSKF 1353

Query: 976  SAERINKANGSVKQVSRIAQPDASFTSMENIIRDQKEVDNI--RKRNSSGVIKSKK---- 815
            S +   +    VKQ++   Q D +    E+ I D +E +N   +K  S  V K KK    
Sbjct: 1354 SFDNAEQ----VKQITNTLQLDGTNHWKEDAITDLREEENFPTKKSKSLKVNKVKKNDIT 1409

Query: 814  ----------------LKNDKVREKHPSGKNVREGFVCGACGQAGHMRTNKNCPRYGEDS 683
                            +KN   +EK PS    RE FVCGACG+AGHMRTNKNCP+YGED 
Sbjct: 1410 PISIPNKKIKLNMGEGIKNQVFKEKKPS----RETFVCGACGKAGHMRTNKNCPKYGEDL 1465

Query: 682  DTHVENSGLERIPGKLNLHDSSA--QXXXXXXXXXXXIAARNVPAEAQEKIEKAKTFQLK 509
            +T +E++ +E+  GK +  D S+  Q              +  P +   KI       LK
Sbjct: 1466 ETQLESTDMEKSSGKSSFVDPSSLSQHKAPSKKSMSKGTTKIAPVDNSSKIP------LK 1519

Query: 508  LKCALPDKSLEQNTTAT-QSSDKQDEMGSRSV--SKYSKIIISNTMKVEDFHGEPQKQPS 338
             KC+  +KS ++    + QSSDK     S +   +K +KIII   +K +D   E  K  +
Sbjct: 1520 FKCSSTEKSSDKPAIESLQSSDKPVTSDSETAKSAKVNKIIIPKKVKPDDTQAESGKH-A 1578

Query: 337  IVIRPPLN-----IEXXXXXXXXXXXXKVDQVRDEVRYGMQE------------------ 227
            IVIRPP +     ++            ++D+ ++  +  ++                   
Sbjct: 1579 IVIRPPTDSGRGQVDSHKFPIKIRPPTEIDREQNHKKIVIKRTKEVIDLELDSPGGNTGL 1638

Query: 226  EHRKTEKMMQLSSYEILRKQE 164
            +HRKT+++++LS++E  +KQE
Sbjct: 1639 QHRKTKRIVELSNFEKQKKQE 1659



 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 39/46 (84%), Positives = 41/46 (89%)
 Frame = -1

Query: 1458 FLQLQQQAREKCQEIWDRQLQNLSAAEGDENESDSEANSDLDSFAG 1321
            FLQLQQQ REKCQEIWDRQ+Q+LSA  GDENESD E NSDLDSFAG
Sbjct: 1216 FLQLQQQTREKCQEIWDRQVQSLSAVNGDENESDLEGNSDLDSFAG 1261


Top