BLASTX nr result

ID: Papaver22_contig00004437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00004437
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    79   6e-13
ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    75   5e-12
emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana] gi|7...    75   5e-12
ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554...    75   9e-12

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 62/156 (39%), Positives = 91/156 (58%)
 Frame = +2

Query: 35  FMDLVERVFFLRNMSPIHKFSLTYKSDSHYLDNNRAKEWIATAVKCKVEEIILSMSYPED 214
           FMD V+RV  LR  S I +F L+ +      D +R   WI+ AV   V+++ L +   E 
Sbjct: 81  FMDFVDRVLALRGPSNIVQFYLSCEVKD---DPSRVGTWISAAVNRNVKDLYLELRDFEA 137

Query: 215 TLVTLPVGLFTSESLTKLEIDFEDNYSYCMLDLPHSISFPRLKILRISGIDFQDEVLVRQ 394
           + V LP  LF  E+LT+LEI    N  Y +L LP SIS   LKIL +  + F D+   +Q
Sbjct: 138 SFV-LPHCLFNCETLTELEI----NMPY-ILKLPSSISLSCLKILNLYEVIFTDDHSTQQ 191

Query: 395 LFSSCPQLEDLCLNDCDFCHINLISISAPKLKSFTL 502
           LFS  P L +L +++C++ ++  +SISAPKL+S  +
Sbjct: 192 LFS-LPNLVELEIHECNWMNLVAVSISAPKLQSLDI 226


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 58/157 (36%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
 Frame = +2

Query: 35  FMDLVERVFFLRNMSPIHKFSLTYKSDSHYLDNNRAKEWIATAVKCKVEEIILSM-SYPE 211
           FM+ VERV  LR+ S I KF+L+   D    D  R + W++ AV   V+E+ ++     E
Sbjct: 94  FMNSVERVLLLRDSSNIEKFTLSCGID----DATRTRTWVSAAVNRNVKELCVNFYEGGE 149

Query: 212 DTLVTLPVGLFTSESLTKLEIDFEDNYSYCMLDLPHSISFPRLKILRISGIDFQDEVLVR 391
                 P+ LFT  +LTKL+I      S+ +L L  SIS P LKIL +  + F DE   +
Sbjct: 150 SESFVSPLCLFTCATLTKLKIT-----SHGVLRLSSSISLPCLKILSLQHVVFPDEDSTQ 204

Query: 392 QLFSSCPQLEDLCLNDCDFCHINLISISAPKLKSFTL 502
           Q+  +   LE L ++  D+ ++  I+ISAPKL+S  +
Sbjct: 205 QIL-NLRTLEKLKISYYDWKNLKAITISAPKLRSLDI 240


>ref|NP_567421.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75249810|sp|Q94B46.1|FBL74_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g14096
           gi|14596145|gb|AAK68800.1| Unknown protein [Arabidopsis
           thaliana] gi|22136112|gb|AAM91134.1| unknown protein
           [Arabidopsis thaliana] gi|332657971|gb|AEE83371.1|
           F-box/LRR-repeat protein [Arabidopsis thaliana]
          Length = 468

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 8/190 (4%)
 Frame = +2

Query: 11  DDEEETNRFMDLVERVFFLRNMSPIHKFSLTYKSDSHYLDNNRAKEWIATAVKCKVEEII 190
           ++ E ++ FMD V+RV  L+  SP+HKFSL        ++ +R   WI   ++  V ++ 
Sbjct: 62  NETEVSSSFMDFVDRVLALQGNSPLHKFSLKIGDG---VEPDRIIPWINNVLERGVSDLD 118

Query: 191 LSMSYPEDTLVTLPVGLFTSESLTKLEI------DFEDNYSYCMLDLPHSISFPRLKILR 352
           L + Y E   V  P  +F S++L +L++      +FED Y             P+LK L 
Sbjct: 119 LHV-YMETEFV-FPSEMFLSKTLVRLKLMLYPLLEFEDVY------------LPKLKTLY 164

Query: 353 ISGIDFQDEVL-VRQLFSSCPQLEDLCLNDCDFCHINLISISAPKLKSFTL-TGGMPMVS 526
           I    F+   + + +L S CP LEDL L+D  +C  +  S+S P LK  T  T       
Sbjct: 165 IDSCYFEKYGIGLTKLLSGCPILEDLVLDDIPWCTWDFASVSVPTLKRLTFSTQVRDEFP 224

Query: 527 VGLKIDAPNL 556
             + ID PNL
Sbjct: 225 KSVSIDTPNL 234


>emb|CAB10188.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268114|emb|CAB78451.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 1047

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 8/190 (4%)
 Frame = +2

Query: 11  DDEEETNRFMDLVERVFFLRNMSPIHKFSLTYKSDSHYLDNNRAKEWIATAVKCKVEEII 190
           ++ E ++ FMD V+RV  L+  SP+HKFSL        ++ +R   WI   ++  V ++ 
Sbjct: 317 NETEVSSSFMDFVDRVLALQGNSPLHKFSLKIGDG---VEPDRIIPWINNVLERGVSDLD 373

Query: 191 LSMSYPEDTLVTLPVGLFTSESLTKLEI------DFEDNYSYCMLDLPHSISFPRLKILR 352
           L + Y E   V  P  +F S++L +L++      +FED Y             P+LK L 
Sbjct: 374 LHV-YMETEFV-FPSEMFLSKTLVRLKLMLYPLLEFEDVY------------LPKLKTLY 419

Query: 353 ISGIDFQDEVL-VRQLFSSCPQLEDLCLNDCDFCHINLISISAPKLKSFTL-TGGMPMVS 526
           I    F+   + + +L S CP LEDL L+D  +C  +  S+S P LK  T  T       
Sbjct: 420 IDSCYFEKYGIGLTKLLSGCPILEDLVLDDIPWCTWDFASVSVPTLKRLTFSTQVRDEFP 479

Query: 527 VGLKIDAPNL 556
             + ID PNL
Sbjct: 480 KSVSIDTPNL 489


>ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1|
           F-box family-3 [Medicago truncatula]
          Length = 642

 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 4/186 (2%)
 Frame = +2

Query: 11  DDEEETNRFMDLVERVFFLRNMSPIHKFSLTYKSDSHYLDNNRAKEWIATAVKCKVEEII 190
           + + + N  +DLV R+  +   + I +  +     S  +D ++    I++A   K++ + 
Sbjct: 239 NQKNKANCLLDLVGRL--MHKSTRIERLGVQIFRSS--IDTDKVSSIISSAANHKLQYLD 294

Query: 191 LSMSYPEDTLVTLPVGLFTSESLTKLEIDFEDNYSYCMLDLPHSISFPRLKILRISGIDF 370
           LS+    D  V LP      ESL +L +  +       L +P  I FP LK L ++ + F
Sbjct: 295 LSLGDRNDNFV-LPHSFPAFESLNELRLGLQFT-----LHIPSGICFPILKTLVVTNVTF 348

Query: 371 QDEVLVRQLFSSCPQLEDLCLNDCDFCHINLISISAPKLKSFTLTGGMPMVS----VGLK 538
            +E   +QLFS CP L++L L++C + HIN IS+S   L+  T++  M  V     + LK
Sbjct: 349 ANENSAQQLFSGCPVLQELELDNCYWEHINQISLSISTLRKLTISYLMLCVDYDHIMKLK 408

Query: 539 IDAPNL 556
           IDA NL
Sbjct: 409 IDAVNL 414


Top