BLASTX nr result

ID: Papaver22_contig00004228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00004228
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA37374.1| TPA: hypothetical protein ZEAMMB73_218857 [Zea m...   126   2e-27
gb|AFW58548.1| hypothetical protein ZEAMMB73_336389 [Zea mays]        126   2e-27
ref|NP_001151154.1| LOC100284787 [Zea mays] gi|195644674|gb|ACG4...   126   2e-27
ref|NP_001148353.1| small nuclear ribonucleoprotein Sm D1 [Zea m...   126   2e-27
ref|NP_001152576.1| small nuclear ribonucleoprotein Sm D1 [Zea m...   124   7e-27

>tpg|DAA37374.1| TPA: hypothetical protein ZEAMMB73_218857 [Zea mays]
          Length = 108

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/63 (96%), Positives = 62/63 (98%)
 Frame = +3

Query: 3   MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKATTG 182
           MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKK TTG
Sbjct: 29  MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTTG 88

Query: 183 KPV 191
           KP+
Sbjct: 89  KPL 91


>gb|AFW58548.1| hypothetical protein ZEAMMB73_336389 [Zea mays]
          Length = 109

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/63 (96%), Positives = 62/63 (98%)
 Frame = +3

Query: 3   MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKATTG 182
           MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKK TTG
Sbjct: 29  MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTTG 88

Query: 183 KPV 191
           KP+
Sbjct: 89  KPL 91


>ref|NP_001151154.1| LOC100284787 [Zea mays] gi|195644674|gb|ACG41805.1| small nuclear
           ribonucleoprotein Sm D1 [Zea mays]
          Length = 116

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/63 (96%), Positives = 62/63 (98%)
 Frame = +3

Query: 3   MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKATTG 182
           MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKK TTG
Sbjct: 36  MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTTG 95

Query: 183 KPV 191
           KP+
Sbjct: 96  KPL 98


>ref|NP_001148353.1| small nuclear ribonucleoprotein Sm D1 [Zea mays]
           gi|195618318|gb|ACG30989.1| small nuclear
           ribonucleoprotein Sm D1 [Zea mays]
           gi|414586802|tpg|DAA37373.1| TPA: small nuclear
           ribonucleoprotein Sm D1 [Zea mays]
          Length = 115

 Score =  126 bits (316), Expect = 2e-27
 Identities = 61/63 (96%), Positives = 62/63 (98%)
 Frame = +3

Query: 3   MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKATTG 182
           MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKK TTG
Sbjct: 36  MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTTG 95

Query: 183 KPV 191
           KP+
Sbjct: 96  KPL 98


>ref|NP_001152576.1| small nuclear ribonucleoprotein Sm D1 [Zea mays]
           gi|195657675|gb|ACG48305.1| small nuclear
           ribonucleoprotein Sm D1 [Zea mays]
           gi|413922839|gb|AFW62771.1| small nuclear
           ribonucleoprotein Sm D1 isoform 1 [Zea mays]
           gi|413922840|gb|AFW62772.1| small nuclear
           ribonucleoprotein Sm D1 isoform 2 [Zea mays]
          Length = 95

 Score =  124 bits (312), Expect = 7e-27
 Identities = 60/63 (95%), Positives = 62/63 (98%)
 Frame = +3

Query: 3   MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKATTG 182
           MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKK T+G
Sbjct: 17  MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTSG 76

Query: 183 KPV 191
           KP+
Sbjct: 77  KPL 79


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