BLASTX nr result

ID: Papaver22_contig00004112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00004112
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    72   2e-10
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    63   9e-08
emb|CBI32913.3| unnamed protein product [Vitis vinifera]               62   2e-07
ref|NP_680364.1| putative F-box/LRR-repeat protein [Arabidopsis ...    61   5e-07

>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 62/195 (31%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
 Frame = +2

Query: 5   FPRLKRLELYHFKFTDDCWNEELFSNSPVLEELVLECCIVSMSSFCISIPTLKLLKI--S 178
           FP LK L   H  FT++   + LFS  PVL++L  E C     +  ++IPTLK L I   
Sbjct: 170 FPSLKILSFAHVTFTNEKSAQRLFSGCPVLQDLSFEKCYWVNINISVAIPTLKKLDIFFR 229

Query: 179 TWSLEGNALRDCVFKIDAPRLVTFSY*GYVAKEFFLSSFPALVEAAIN---FTAEKNH-- 343
           + SL+ N+   C+FKIDA  L++ SY        FL +  ++V+A I+   F  + N   
Sbjct: 230 SSSLDRNS---CMFKIDAVNLLSLSYKSNPTINCFLVNSTSIVDANIDLGFFCVQNNELH 286

Query: 344 -AAETCRLLQALAHAKCLTVYDITLKAICSAYYVSNNLLTFPNVKVLNITEALTNDQGLL 520
            A     L   L   + L + D T++ +  A    + L +F N+  L +     + + L 
Sbjct: 287 VAVFAIELFSRLGSVESLRLSDQTIQCLNYAKSALHLLPSFKNLTRLEVHFDDPSCEVLA 346

Query: 521 VLLRTVPNLESLVFY 565
            +LR  P LE L  Y
Sbjct: 347 DILRKSPKLEFLHIY 361


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 63.2 bits (152), Expect = 9e-08
 Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 25/209 (11%)
 Frame = +2

Query: 8   PRLKRLELYHFKFTDDCWNEELFSNSPVLEELVLE------CCIVSMSSFCISIPTLKLL 169
           P LK L L   +++DD   ++L S  PVLEELV+E        +V++S+     P+LK+L
Sbjct: 163 PSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSN-----PSLKIL 217

Query: 170 KISTWSLEGNAL------RDCVFKIDAPRLVTFSY*GYVAKEFFLSSFPALVEAAINFTA 331
           +I  ++ +G A       +D    +DAP L   S   Y++K++F+   P+LV+A I+   
Sbjct: 218 RIFFFT-DGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQ 276

Query: 332 EKNHAAET------------CRLLQALAHAKCLTVYDITLKAICSAYYVSNNLLTFPNVK 475
           +     E+              LL  +++ KCL++  +TL ++ S       L TF N+ 
Sbjct: 277 DSEEFEESPHNGGISYHGPIYELLGRISNVKCLSLTGVTLDSL-SGTIGDYKLPTFHNMT 335

Query: 476 VLN-ITEALTNDQGLLVLLRTVPNLESLV 559
            L  +     N   L   L + PNLE+LV
Sbjct: 336 RLEFLFIGGFNWDFLPNFLHSSPNLEALV 364


>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 25/209 (11%)
 Frame = +2

Query: 8   PRLKRLELYHFKFTDDCWNEELFSNSPVLEELVLE------CCIVSMSSFCISIPTLKLL 169
           P LK L L   +++DD   ++L S  PVLEELV+E        +V++S+     P+LK+L
Sbjct: 140 PSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSN-----PSLKIL 194

Query: 170 KISTWSLEGNAL------RDCVFKIDAPRLVTFSY*GYVAKEFFLSSFPALVEAAINFTA 331
           +I  ++ +G A       +D    +DAP L   S   Y++K++F+   P+LV+A I+   
Sbjct: 195 RIFFFT-DGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQ 253

Query: 332 EKNHAAET------------CRLLQALAHAKCLTVYDITLKAICSAYYVSNNLLTFPNVK 475
           +     E+              LL  +++ KCL++  +TL     ++     L TF N+ 
Sbjct: 254 DSEEFEESPHNGGISYHGPIYELLGRISNVKCLSLTGVTLDV---SFLCPPILPTFHNMT 310

Query: 476 VLN-ITEALTNDQGLLVLLRTVPNLESLV 559
            L  +     N   L   L + PNLE+LV
Sbjct: 311 CLEFLFIGGFNWDFLPNFLHSSPNLEALV 339


>ref|NP_680364.1| putative F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|122214096|sp|Q3E8L4.1|FBL86_ARATH RecName:
           Full=F-box/LRR-repeat protein At5g38396
           gi|332006926|gb|AED94309.1| putative F-box/LRR-repeat
           protein [Arabidopsis thaliana]
          Length = 462

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
 Frame = +2

Query: 8   PRLKRLELYHFKFTDDCWNEELFSNS-PVLEELVLECCI--VSMSSFCISIPTLKLLKIS 178
           P LK LEL +  F  D     LF  + P LEELV+       + +   +S P+LK L +S
Sbjct: 166 PMLKTLELDYVGFYGDL----LFLRALPALEELVIVDAFWFTTFTDVTVSNPSLKTLTMS 221

Query: 179 TWSLEGNALRDCVFKIDAPRLVTFSY*GYVAKEFFLSSFPALVEAAINF---------TA 331
           +    G+         D P LV FS+  YVAK++ L +   L+EA IN            
Sbjct: 222 SNIYSGS------ISFDTPSLVYFSHFKYVAKDYPLVNMENLLEARINLGVTEGQIRRAR 275

Query: 332 EKNHAAETC-------RLLQALAHAKCLTVYDITLKAICSAYYVSNNLLTFPNVKVLNIT 490
           E N+  E         +L+  + + +CL +   TL+ +  +     ++  F N+K L+I 
Sbjct: 276 EPNNNDEVVLRFPNVGKLMNGIRNVQCLDLSANTLEMLSLS---CESMPVFKNLKSLSIK 332

Query: 491 EALTND-QGLLVLLRTVPNLESLV 559
            A     Q + VLLR  P+LE+LV
Sbjct: 333 SAENRGWQAMPVLLRNCPHLETLV 356


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