BLASTX nr result

ID: Papaver22_contig00003228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00003228
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN33989.1| 50S ribosomal protein l21 mitochondrial precursor...   199   2e-48
ref|XP_004158283.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...   196   8e-48
ref|XP_004144239.1| PREDICTED: 50S ribosomal protein L21, mitoch...   196   8e-48
ref|XP_003529325.1| PREDICTED: 50S ribosomal protein L21, mitoch...   189   1e-45
gb|ADR70863.1| mitochondrial 50S ribosomal protein L21 [Hevea br...   189   2e-45

>gb|ADN33989.1| 50S ribosomal protein l21 mitochondrial precursor [Cucumis melo
           subsp. melo]
          Length = 279

 Score =  199 bits (505), Expect = 2e-48
 Identities = 128/273 (46%), Positives = 155/273 (56%), Gaps = 1/273 (0%)
 Frame = +3

Query: 120 LRNKTMASRRCLNPLTRHCPYLFSSNAPSLHSIVNNTAPLALPVNDHHLPLETHTSNLPQ 299
           +R  TMA+RRCL  LTRH   + S+  P +H++    AP  L  N H     TH S    
Sbjct: 5   IRITTMANRRCLQVLTRHASAILSTK-PYIHTL--KIAPSLLFENFH-----THASLSNC 56

Query: 300 FHRKFE-SLCFFKSESARHFSSERGSHGKRGXXXXXXXXXXXXXXXXXXXXXXXXXXXTG 476
              K + SLC + S + R+ SS+  +  +                              G
Sbjct: 57  LSAKTDPSLCTYWSHT-RYLSSDSRNGNE---------DDFTEDEDEDEDDEAYDSEDDG 106

Query: 477 NDISNRVPKRTYSLENKEQEAAAIGYKVIGPLDPTEKPFTPREPVFAVVQIGSHQFKVSN 656
              S+RV K+ Y+ E  E EAAAIGYKV+GPLD +E  F P EP FAVVQIGSHQFKVSN
Sbjct: 107 ISTSSRVMKKEYTKEEMEAEAAAIGYKVLGPLDQSEGIFKPYEPAFAVVQIGSHQFKVSN 166

Query: 657 EDTIYTERLKFCEVNDKLILNKVLMVGSKSQTIIGRPILPXXXXXXXXXXXXLDAKVIIF 836
            D+I+TERLKFC+VNDKLILNKVL+VGS SQTI+GRP +P            LDAKVIIF
Sbjct: 167 GDSIFTERLKFCDVNDKLILNKVLLVGSSSQTIVGRPTVPSAFVQAVVEEHALDAKVIIF 226

Query: 837 XXXXXXXXXXTNGHRQELTRLRITKIEGIEIPE 935
                     T GHRQELT+LRI  I+GIE PE
Sbjct: 227 KKKRRKNYRRTKGHRQELTKLRIVDIQGIEKPE 259


>ref|XP_004158283.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L21,
           mitochondrial-like [Cucumis sativus]
          Length = 270

 Score =  196 bits (499), Expect = 8e-48
 Identities = 126/268 (47%), Positives = 152/268 (56%), Gaps = 1/268 (0%)
 Frame = +3

Query: 135 MASRRCLNPLTRHCPYLFSSNAPSLHSIVNNTAPLALPVNDHHLPLETHTSNLPQFHRKF 314
           MA+RRCL  LTRH   +FS+  P +H +   TAP  L  N       TH S       K 
Sbjct: 1   MANRRCLQVLTRHASAIFSTK-PYIHPL--KTAPSFLSQN-----FRTHASLSNCLSAKT 52

Query: 315 E-SLCFFKSESARHFSSERGSHGKRGXXXXXXXXXXXXXXXXXXXXXXXXXXXTGNDISN 491
           + SLC +   + R+ SS+  +  +                              G   S+
Sbjct: 53  DPSLCTYWPHT-RYLSSDSRNGSE---------DDFTEDEDEDEDDEAYDSEDDGISTSS 102

Query: 492 RVPKRTYSLENKEQEAAAIGYKVIGPLDPTEKPFTPREPVFAVVQIGSHQFKVSNEDTIY 671
           RV K+ Y+ E  E EAAAIGYKV+GPLD +E  F P EP FAVVQIGSHQFKVSN D+I+
Sbjct: 103 RVMKKEYTKEEMEAEAAAIGYKVLGPLDQSEGVFKPYEPAFAVVQIGSHQFKVSNGDSIF 162

Query: 672 TERLKFCEVNDKLILNKVLMVGSKSQTIIGRPILPXXXXXXXXXXXXLDAKVIIFXXXXX 851
           TERLKFC+VNDKLILNKVL+VGS SQTI+GRP +P            LDAKVIIF     
Sbjct: 163 TERLKFCDVNDKLILNKVLLVGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKXKRR 222

Query: 852 XXXXXTNGHRQELTRLRITKIEGIEIPE 935
                T GHRQELT+LRI  I+G+E PE
Sbjct: 223 KNYRRTKGHRQELTKLRIVDIQGVEKPE 250


>ref|XP_004144239.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Cucumis
           sativus]
          Length = 270

 Score =  196 bits (499), Expect = 8e-48
 Identities = 125/268 (46%), Positives = 151/268 (56%), Gaps = 1/268 (0%)
 Frame = +3

Query: 135 MASRRCLNPLTRHCPYLFSSNAPSLHSIVNNTAPLALPVNDHHLPLETHTSNLPQFHRKF 314
           MA+RRCL  LTRH   +FS+  P +H +   TAP  L  N       TH S       K 
Sbjct: 1   MANRRCLQVLTRHASAIFSTK-PYIHPL--KTAPSFLSQN-----FRTHASLSNCLSAKT 52

Query: 315 E-SLCFFKSESARHFSSERGSHGKRGXXXXXXXXXXXXXXXXXXXXXXXXXXXTGNDISN 491
           + SLC +   + R+ SS+  +  +                              G   S+
Sbjct: 53  DPSLCTYWPHT-RYLSSDSRNGSE---------DDFTEDEDEDEDDEAYDSEDDGISTSS 102

Query: 492 RVPKRTYSLENKEQEAAAIGYKVIGPLDPTEKPFTPREPVFAVVQIGSHQFKVSNEDTIY 671
           RV K+ Y+ E  E EAAAIGYKV+GPLD +E  F P EP FAVVQIGSHQFKVSN D+I+
Sbjct: 103 RVMKKEYTKEEMEAEAAAIGYKVLGPLDQSEGVFKPYEPAFAVVQIGSHQFKVSNGDSIF 162

Query: 672 TERLKFCEVNDKLILNKVLMVGSKSQTIIGRPILPXXXXXXXXXXXXLDAKVIIFXXXXX 851
           TERLKFC+VNDKLILNKVL+VGS SQTI+GRP +P            LDAKVIIF     
Sbjct: 163 TERLKFCDVNDKLILNKVLLVGSSSQTIVGRPTVPSAVVQAVVEEHALDAKVIIFKKKRR 222

Query: 852 XXXXXTNGHRQELTRLRITKIEGIEIPE 935
                T GHRQELT+LRI  I+G+E PE
Sbjct: 223 KNYRRTKGHRQELTKLRIVDIQGVEKPE 250


>ref|XP_003529325.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like isoform 1
           [Glycine max]
          Length = 262

 Score =  189 bits (480), Expect = 1e-45
 Identities = 120/268 (44%), Positives = 144/268 (53%), Gaps = 1/268 (0%)
 Frame = +3

Query: 135 MASRRCLNPLTRHCPYLFSSNAPSLHSIVNNTAPLALPVNDHHLPLETHTSNLPQFHRKF 314
           MASRRCL  LT+  P+LF   A SL S+        LP  + +      T+    F +  
Sbjct: 1   MASRRCLRALTQTRPFLFRK-ASSLRSLA------VLPFPNSNASPHAFTARASVFAQCP 53

Query: 315 ESLCFFKSESARHFSSERGSHGKRGXXXXXXXXXXXXXXXXXXXXXXXXXXXTGNDISNR 494
              CF   +   H   E  S                                  +D++  
Sbjct: 54  HLRCFSSDKKDDHSDEEDDSD---------------------EDYDEEEDYVDDDDVTVS 92

Query: 495 VPKRTYSLENKEQEAAAIGYKVIGPLDPTEKP-FTPREPVFAVVQIGSHQFKVSNEDTIY 671
             K+ Y+ E KE EAAAIGY+V+GPL   E   F P EPVFAVVQIGSHQFKVSN D+I+
Sbjct: 93  RGKKVYTAEEKEAEAAAIGYRVVGPLQKEEDSVFKPYEPVFAVVQIGSHQFKVSNRDSIF 152

Query: 672 TERLKFCEVNDKLILNKVLMVGSKSQTIIGRPILPXXXXXXXXXXXXLDAKVIIFXXXXX 851
           TERLKFCEVNDKLILNKVL++GS SQTI+GRPI+P            LDAKVIIF     
Sbjct: 153 TERLKFCEVNDKLILNKVLLLGSASQTIVGRPIVPDAAVHAVVEEHALDAKVIIFKKKRR 212

Query: 852 XXXXXTNGHRQELTRLRITKIEGIEIPE 935
                T GHRQELT+LRIT I+GIE P+
Sbjct: 213 KNYRRTKGHRQELTKLRITDIQGIEKPQ 240


>gb|ADR70863.1| mitochondrial 50S ribosomal protein L21 [Hevea brasiliensis]
          Length = 271

 Score =  189 bits (479), Expect = 2e-45
 Identities = 121/278 (43%), Positives = 148/278 (53%), Gaps = 11/278 (3%)
 Frame = +3

Query: 135 MASRRCLNPLTRHCPYLFSSNAPSLH-------SIVN-NTAPLALPVNDHHLPLETHT-- 284
           MA RRCL+ LTR    L SSN  +L+       S  N N+    L     H+  +  +  
Sbjct: 1   MAQRRCLHTLTRQAIALLSSNPTTLYHPCKVAASFPNLNSVKALLICKSSHVFTKADSIW 60

Query: 285 -SNLPQFHRKFESLCFFKSESARHFSSERGSHGKRGXXXXXXXXXXXXXXXXXXXXXXXX 461
            S  P  HR++     F S+S     ++       G                        
Sbjct: 61  CSFWPYHHRRY-----FSSDSRDESENDDEDEETAGEDSD-------------------- 95

Query: 462 XXXTGNDISNRVPKRTYSLENKEQEAAAIGYKVIGPLDPTEKPFTPREPVFAVVQIGSHQ 641
               G ++     KR Y+ E KE+EAAAIGYKV+GPL  ++  F P EPVFAVVQIGSHQ
Sbjct: 96  ----GEEVKGSDLKREYTAEEKEEEAAAIGYKVVGPLQKSDLVFKPYEPVFAVVQIGSHQ 151

Query: 642 FKVSNEDTIYTERLKFCEVNDKLILNKVLMVGSKSQTIIGRPILPXXXXXXXXXXXXLDA 821
           FKVSN D I+TE+LKFCEVNDKLILNKVL++GS SQTI+GRP +P            LDA
Sbjct: 152 FKVSNGDCIFTEKLKFCEVNDKLILNKVLLLGSSSQTIVGRPTVPDAAVHAVVEEHALDA 211

Query: 822 KVIIFXXXXXXXXXXTNGHRQELTRLRITKIEGIEIPE 935
           K IIF          T GHRQELT+LRIT I+GIE PE
Sbjct: 212 KAIIFKKKRRKNYRRTKGHRQELTKLRITDIQGIEKPE 249


Top