BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00003205
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311536.1| rna-dependent RNA polymerase [Populus tricho...   387   e-105
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   385   e-105
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      385   e-105
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      382   e-104
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       379   e-103

>ref|XP_002311536.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222851356|gb|EEE88903.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1133

 Score =  387 bits (993), Expect = e-105
 Identities = 202/282 (71%), Positives = 229/282 (81%), Gaps = 1/282 (0%)
 Frame = +3

Query: 6    RATMNDEKKQTLLYERILSTLHNGVVIGDKKFEFLAFSASQLRDNSAWMFASKGSLTAAS 185
            R +  +E ++T +Y RILSTL NG+VIGDKKFEFLAFS+SQLR+NS WMFAS+  LTAA 
Sbjct: 422  RTSSRNELRRTAIYNRILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLTAAD 481

Query: 186  IRDWMGDFRKIRNVAKYAARLGQSFGSSTETLSVSRXXXXXXXXXXXXSNGTVYTFSDGI 365
            IR WMG F KIRNVA+YAARLGQSFGSSTETLSVS               GT Y FSDGI
Sbjct: 482  IRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSHEIEIIPDIEVSRGGTRYLFSDGI 541

Query: 366  GKISCEFAHKVASKCGLK-CTPSAFQIRYGGYKGVVAVDPRSVKKLYLRPSMRKFESKVT 542
            GKIS EFA KVA KCG K  TPSAFQIRY GYKGVVAVDP S KKL LR SM K+ES+ T
Sbjct: 542  GKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSSKKLSLRRSMFKYESENT 601

Query: 543  KLDVLSWSKFQPCFLNRQIISLLSTLGVSDNVFKKKQKEAVKQLDSILTDPLKAYKALEI 722
            KLDVL+ SK+QPCFLNRQ+I+LLSTLGV D+ F++KQ+EAV QLD++LTDPL+A +ALE+
Sbjct: 602  KLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQLDAMLTDPLRAQEALEL 661

Query: 723  MSPAETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLSELR 848
            MSP E TNILKEMLLCGY+PD EPFLSMMLQTFRA+KL ELR
Sbjct: 662  MSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELR 703


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  385 bits (989), Expect = e-105
 Identities = 199/279 (71%), Positives = 228/279 (81%), Gaps = 1/279 (0%)
 Frame = +3

Query: 15   MNDEKKQTLLYERILSTLHNGVVIGDKKFEFLAFSASQLRDNSAWMFASKGSLTAASIRD 194
            M++E ++T +Y RILS L NG+VIGDKKF+FLA S+SQLRDNSAWMFAS+  LTAA IR 
Sbjct: 412  MSNEGRRTGVYRRILSILQNGIVIGDKKFDFLAVSSSQLRDNSAWMFASRPGLTAADIRS 471

Query: 195  WMGDFRKIRNVAKYAARLGQSFGSSTETLSVSRXXXXXXXXXXXXSNGTVYTFSDGIGKI 374
             MGDF +IRNVAKYAARLGQSF SS ETL V++             +GT Y FSDGIGKI
Sbjct: 472  RMGDFSQIRNVAKYAARLGQSFSSSKETLKVAKHEIEIIPDIETHRDGTTYVFSDGIGKI 531

Query: 375  SCEFAHKVASKCGLK-CTPSAFQIRYGGYKGVVAVDPRSVKKLYLRPSMRKFESKVTKLD 551
            S E AH+VA KCG K  TPSAFQIRYGGYKGVVAVDP S +KL LR SM K+ES+ T LD
Sbjct: 532  SAELAHRVAIKCGCKNSTPSAFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESENTNLD 591

Query: 552  VLSWSKFQPCFLNRQIISLLSTLGVSDNVFKKKQKEAVKQLDSILTDPLKAYKALEIMSP 731
            VLSWSK++PCFLNRQ+I+LLSTLGV D+VF+KKQ+EAV QLD+IL DPL+A +ALE+MSP
Sbjct: 592  VLSWSKYRPCFLNRQLITLLSTLGVKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSP 651

Query: 732  AETTNILKEMLLCGYKPDQEPFLSMMLQTFRAAKLSELR 848
             E TNILKEML+CGYKPD EPFLSMMLQTFRAAKL ELR
Sbjct: 652  GENTNILKEMLMCGYKPDAEPFLSMMLQTFRAAKLLELR 690


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  385 bits (989), Expect = e-105
 Identities = 196/274 (71%), Positives = 228/274 (83%), Gaps = 1/274 (0%)
 Frame = +3

Query: 30   KQTLLYERILSTLHNGVVIGDKKFEFLAFSASQLRDNSAWMFASKGSLTAASIRDWMGDF 209
            ++T +Y+RILSTL NG+VIG+K+FEFLAFS+SQLR+NSAWMFAS+  LTAA IR WMG+F
Sbjct: 423  RRTGIYKRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLTAADIRSWMGNF 482

Query: 210  RKIRNVAKYAARLGQSFGSSTETLSVSRXXXXXXXXXXXXSNGTVYTFSDGIGKISCEFA 389
             KIRNVAKYAARLGQSF SSTETLSVS+             +G  Y FSDGIGKIS EFA
Sbjct: 483  SKIRNVAKYAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVFSDGIGKISAEFA 542

Query: 390  HKVASKCGLK-CTPSAFQIRYGGYKGVVAVDPRSVKKLYLRPSMRKFESKVTKLDVLSWS 566
             KVA+KC LK CTPSAFQIR GG+KGVVA+DP S  KL LR SM K+ES+ TKLDVL+WS
Sbjct: 543  KKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDPTSSWKLSLRKSMEKYESENTKLDVLAWS 602

Query: 567  KFQPCFLNRQIISLLSTLGVSDNVFKKKQKEAVKQLDSILTDPLKAYKALEIMSPAETTN 746
            K+QPCFLNRQ+I+LLSTLGV D  F+KKQ+E V QL+++LTDPL+A +ALE+MSP E TN
Sbjct: 603  KYQPCFLNRQLITLLSTLGVPDRAFEKKQREVVDQLNALLTDPLEAQEALELMSPGENTN 662

Query: 747  ILKEMLLCGYKPDQEPFLSMMLQTFRAAKLSELR 848
            ILKEMLLCGYKPD EPFLSMML+TFRA+KL ELR
Sbjct: 663  ILKEMLLCGYKPDAEPFLSMMLETFRASKLLELR 696


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  382 bits (982), Expect = e-104
 Identities = 195/274 (71%), Positives = 227/274 (82%), Gaps = 1/274 (0%)
 Frame = +3

Query: 30   KQTLLYERILSTLHNGVVIGDKKFEFLAFSASQLRDNSAWMFASKGSLTAASIRDWMGDF 209
            ++T +Y+RILSTL NG+VIG+K+FEFLAFS+SQLR+NSAWMFAS+  LTAA IR WMG+F
Sbjct: 423  RRTGIYKRILSTLRNGIVIGNKRFEFLAFSSSQLRENSAWMFASRKGLTAADIRSWMGNF 482

Query: 210  RKIRNVAKYAARLGQSFGSSTETLSVSRXXXXXXXXXXXXSNGTVYTFSDGIGKISCEFA 389
             KIRNVAKYAARLGQSF SSTETLSVS+             +G  Y F DGIGKIS EFA
Sbjct: 483  SKIRNVAKYAARLGQSFSSSTETLSVSKDEINLIPDIEIMKDGIKYVFPDGIGKISAEFA 542

Query: 390  HKVASKCGLK-CTPSAFQIRYGGYKGVVAVDPRSVKKLYLRPSMRKFESKVTKLDVLSWS 566
             KVA+KC LK CTPSAFQIR GG+KGVVA+DP S  KL LR SM K+ES+ TKLDVL+WS
Sbjct: 543  KKVAAKCRLKGCTPSAFQIRIGGFKGVVAIDPTSSWKLSLRKSMEKYESENTKLDVLAWS 602

Query: 567  KFQPCFLNRQIISLLSTLGVSDNVFKKKQKEAVKQLDSILTDPLKAYKALEIMSPAETTN 746
            K+QPCFLNRQ+I+LLSTLGV D  F+KKQ+E V QL+++LTDPL+A +ALE+MSP E TN
Sbjct: 603  KYQPCFLNRQLITLLSTLGVPDYAFEKKQREVVDQLNALLTDPLEAQEALELMSPGENTN 662

Query: 747  ILKEMLLCGYKPDQEPFLSMMLQTFRAAKLSELR 848
            ILKEMLLCGYKPD EPFLSMML+TFRA+KL ELR
Sbjct: 663  ILKEMLLCGYKPDAEPFLSMMLETFRASKLLELR 696


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  379 bits (974), Expect = e-103
 Identities = 196/272 (72%), Positives = 221/272 (81%)
 Frame = +3

Query: 33  QTLLYERILSTLHNGVVIGDKKFEFLAFSASQLRDNSAWMFASKGSLTAASIRDWMGDFR 212
           +T +YERILSTL NG+VIG KKFEFLAFS+SQLRDNS WMFAS+  LTA  IR WMGDF+
Sbjct: 113 RTDIYERILSTLQNGLVIGAKKFEFLAFSSSQLRDNSVWMFASRPGLTAYDIRTWMGDFQ 172

Query: 213 KIRNVAKYAARLGQSFGSSTETLSVSRXXXXXXXXXXXXSNGTVYTFSDGIGKISCEFAH 392
           +IRNVAKYAARLGQSFGSS ETLSV R             +GT Y FSDGIGKIS +FAH
Sbjct: 173 QIRNVAKYAARLGQSFGSSRETLSVGRHEIKYIPDVEV--HGTNYVFSDGIGKISADFAH 230

Query: 393 KVASKCGLKCTPSAFQIRYGGYKGVVAVDPRSVKKLYLRPSMRKFESKVTKLDVLSWSKF 572
           +VA KCGL+ TPSAFQIRYGGYKGVVAVDP S  KL LR SM K+ES  TKLDVL WSK+
Sbjct: 231 RVAKKCGLQHTPSAFQIRYGGYKGVVAVDPYSPMKLSLRKSMLKYESNNTKLDVLGWSKY 290

Query: 573 QPCFLNRQIISLLSTLGVSDNVFKKKQKEAVKQLDSILTDPLKAYKALEIMSPAETTNIL 752
           QPC+LNRQ+++L+STLGV D VFK+KQ EAV QLD+IL D LKA +AL++MSP E TNIL
Sbjct: 291 QPCYLNRQLVTLMSTLGVKDEVFKRKQNEAVAQLDAILHDSLKAQEALDLMSPGENTNIL 350

Query: 753 KEMLLCGYKPDQEPFLSMMLQTFRAAKLSELR 848
           KEML CGY PD EPFLSMMLQTFRA+KL +LR
Sbjct: 351 KEMLNCGYLPDAEPFLSMMLQTFRASKLLDLR 382