BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00003187
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...    77   4e-16
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de...    75   3e-15
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...    75   3e-15
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...    75   3e-15
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...    76   3e-15

>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
           gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
           [Solanum lycopersicum]
          Length = 1114

 Score = 77.4 bits (189), Expect(2) = 4e-16
 Identities = 56/132 (42%), Positives = 70/132 (53%), Gaps = 16/132 (12%)
 Frame = +1

Query: 298 KTLLYERILSTLHNGVVIGDKKFEFLAFSAHAELSRS*LAEMARNS-----------NFF 444
           +T +YERILSTL  G VIGDKKFEFLAFS+      S     +R             +F 
Sbjct: 420 RTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRAWMGDFS 479

Query: 445 CFKRFANSS*YLGLDG*F*KCGEICSKTRTLL--VPQLKI---VYTFSHGIGKVSSEFAH 609
             K  A  +  LG    F    E  S  R  +  +P +K+    Y FS GIGK+S +FAH
Sbjct: 480 QIKNVAKYAARLGQS--FGSSRETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISGDFAH 537

Query: 610 KVASKCGLKCTP 645
           +VASKCGL+ TP
Sbjct: 538 RVASKCGLQYTP 549



 Score = 32.7 bits (73), Expect(2) = 4e-16
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = +3

Query: 198 DLQYFIRISFVDEDSEKIRSTDI 266
           D+  F+R+SFVDE+ EK+ STD+
Sbjct: 387 DIDNFLRVSFVDEEWEKLYSTDL 409


>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1180

 Score = 74.7 bits (182), Expect(2) = 3e-15
 Identities = 55/132 (41%), Positives = 70/132 (53%), Gaps = 16/132 (12%)
 Frame = +1

Query: 298 KTLLYERILSTLHNGVVIGDKKFEFLAFSAHAELSRS*LAEMAR-----------NSNFF 444
           +T +YERILSTL  G VIGDKKFEFLAFS+      S     +R             +F 
Sbjct: 386 RTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFS 445

Query: 445 CFKRFANSS*YLGLDG*F*KCGEICSKTR--TLLVPQLKI---VYTFSHGIGKVSSEFAH 609
             K  A  +  LG    F    E  S  R    ++P +K+    Y FS GIGK+S++FA 
Sbjct: 446 QIKNVAKYAARLGQS--FGSSKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFAR 503

Query: 610 KVASKCGLKCTP 645
           +VASKCGL+ TP
Sbjct: 504 RVASKCGLQYTP 515



 Score = 32.7 bits (73), Expect(2) = 3e-15
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = +3

Query: 198 DLQYFIRISFVDEDSEKIRSTDI 266
           D+  F+R+SFVDE+ EK+ STD+
Sbjct: 353 DIDNFLRVSFVDEEWEKLYSTDL 375


>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score = 74.7 bits (182), Expect(2) = 3e-15
 Identities = 55/132 (41%), Positives = 70/132 (53%), Gaps = 16/132 (12%)
 Frame = +1

Query: 298 KTLLYERILSTLHNGVVIGDKKFEFLAFSAHAELSRS*LAEMAR-----------NSNFF 444
           +T +YERILSTL  G VIGDKKFEFLAFS+      S     +R             +F 
Sbjct: 412 RTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFS 471

Query: 445 CFKRFANSS*YLGLDG*F*KCGEICSKTR--TLLVPQLKI---VYTFSHGIGKVSSEFAH 609
             K  A  +  LG    F    E  S  R    ++P +K+    Y FS GIGK+S++FA 
Sbjct: 472 QIKNVAKYAARLGQS--FGSSKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFAR 529

Query: 610 KVASKCGLKCTP 645
           +VASKCGL+ TP
Sbjct: 530 RVASKCGLQYTP 541



 Score = 32.7 bits (73), Expect(2) = 3e-15
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = +3

Query: 198 DLQYFIRISFVDEDSEKIRSTDI 266
           D+  F+R+SFVDE+ EK+ STD+
Sbjct: 379 DIDNFLRVSFVDEEWEKLYSTDL 401


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score = 74.7 bits (182), Expect(2) = 3e-15
 Identities = 55/132 (41%), Positives = 70/132 (53%), Gaps = 16/132 (12%)
 Frame = +1

Query: 298 KTLLYERILSTLHNGVVIGDKKFEFLAFSAHAELSRS*LAEMAR-----------NSNFF 444
           +T +YERILSTL  G VIGDKKFEFLAFS+      S     +R             +F 
Sbjct: 420 RTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFS 479

Query: 445 CFKRFANSS*YLGLDG*F*KCGEICSKTR--TLLVPQLKI---VYTFSHGIGKVSSEFAH 609
             K  A  +  LG    F    E  S  R    ++P +K+    Y FS GIGK+S++FA 
Sbjct: 480 QIKNVAKYAARLGQS--FGSSKETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISADFAR 537

Query: 610 KVASKCGLKCTP 645
           +VASKCGL+ TP
Sbjct: 538 RVASKCGLQYTP 549



 Score = 32.7 bits (73), Expect(2) = 3e-15
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = +3

Query: 198 DLQYFIRISFVDEDSEKIRSTDI 266
           D+  F+R+SFVDE+ EK+ STD+
Sbjct: 387 DIDNFLRVSFVDEEWEKLYSTDL 409


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score = 75.9 bits (185), Expect(2) = 3e-15
 Identities = 59/148 (39%), Positives = 77/148 (52%), Gaps = 16/148 (10%)
 Frame = +1

Query: 250 SVQLISARATMNDEKKKTLLYERILSTLHNGVVIGDKKFEFLAFSAHAELSRS*LAEMAR 429
           S +L+   +T N  +  T +YERILSTL  G VIGDKKFEFLAFS+      S     +R
Sbjct: 406 STELLPKASTGNGIR--TNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASR 463

Query: 430 N-----------SNFFCFKRFANSS*YLGLDG*F*KCGEICSKTR--TLLVPQLKI---V 561
                        +F   K  A  +  LG    F    E  S  R    ++P +K+    
Sbjct: 464 RGLTTNDIRSWMGDFSQIKNVAKYAARLGQS--FGSSRETLSVLRHEIEVIPDVKVHGTS 521

Query: 562 YTFSHGIGKVSSEFAHKVASKCGLKCTP 645
           Y FS GIGK+S++FA +VASKCGL+ TP
Sbjct: 522 YVFSDGIGKISADFARRVASKCGLQYTP 549



 Score = 31.2 bits (69), Expect(2) = 3e-15
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +3

Query: 198 DLQYFIRISFVDEDSEKIRSTDI 266
           D+  F+R+SFVDE+ EK+ ST++
Sbjct: 387 DIDNFLRVSFVDEEWEKLYSTEL 409