BLASTX nr result

ID: Papaver22_contig00002793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00002793
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308163.1| GRAS family transcription factor [Populus tr...   138   8e-31
ref|XP_002267055.1| PREDICTED: scarecrow-like protein 9 [Vitis v...   131   8e-29
gb|AFH54555.1| GRAS family protein, partial [Dimocarpus longan]       127   1e-27
ref|XP_002533752.1| transcription factor, putative [Ricinus comm...   122   6e-26
ref|XP_002299866.1| GRAS family transcription factor [Populus tr...   120   2e-25

>ref|XP_002308163.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222854139|gb|EEE91686.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 749

 Score =  138 bits (347), Expect = 8e-31
 Identities = 81/164 (49%), Positives = 107/164 (65%), Gaps = 9/164 (5%)
 Frame = +1

Query: 106 PSDY-TFQAS-------PQSSFNPSNGFDSVAEVLVESPPVAKVQVPDMFCESGPIWQFR 261
           PSDY +FQ          QSS++ SN   +  + LV+SP  +  +VPD   ES  I  FR
Sbjct: 169 PSDYHSFQLQIPHVSSISQSSYSSSNSVITTVDGLVDSPS-SNFKVPDWSGESRSILHFR 227

Query: 262 KGVEEANKFLPNGKNLLLNLESNAFFNNERRKEEAGDILVKLEKKDERETSPNGSRGKKN 441
           KGVEEA++FLP+G +L LN+E+N F + E  K   G++ +K+EK+D  E SP+G RGKKN
Sbjct: 228 KGVEEASRFLPSGNDLFLNIEANKFLSQEP-KVRTGEVAIKVEKQDGGEHSPSGPRGKKN 286

Query: 442 VHREEIDVEEGRSYKQSAVFSEETIRNSMLDMVLLC-KGENYDD 570
            HRE+ DVEEGRS KQ AV++E T+R+ M D VLLC  GE   D
Sbjct: 287 PHREDGDVEEGRSSKQLAVYTESTLRSDMFDKVLLCIPGEGQPD 330


>ref|XP_002267055.1| PREDICTED: scarecrow-like protein 9 [Vitis vinifera]
          Length = 743

 Score =  131 bits (330), Expect = 8e-29
 Identities = 73/152 (48%), Positives = 98/152 (64%)
 Frame = +1

Query: 106 PSDYTFQASPQSSFNPSNGFDSVAEVLVESPPVAKVQVPDMFCESGPIWQFRKGVEEANK 285
           PSD        S F+ SN   S  + LV+SP  + +Q+PD++ ES  +WQF+KGVEEA+K
Sbjct: 172 PSDCNTSQVQASPFSSSNSVVSTMDGLVDSPN-STLQLPDLYNESQSVWQFQKGVEEASK 230

Query: 286 FLPNGKNLLLNLESNAFFNNERRKEEAGDILVKLEKKDERETSPNGSRGKKNVHREEIDV 465
           FLP+G  L  NLE  A    +  K    +++VK E KDE E SP+GSR +KN  RE+I +
Sbjct: 231 FLPSGNELFFNLEVKASLP-QGLKGGNNEVVVKSELKDEEEHSPSGSRVRKNPQREDIGL 289

Query: 466 EEGRSYKQSAVFSEETIRNSMLDMVLLCKGEN 561
           EE RS KQ+AV++E T+R+ M DMVLLC   N
Sbjct: 290 EEERSTKQAAVYTESTLRSEMFDMVLLCNRNN 321


>gb|AFH54555.1| GRAS family protein, partial [Dimocarpus longan]
          Length = 167

 Score =  127 bits (319), Expect = 1e-27
 Identities = 70/139 (50%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
 Frame = +1

Query: 136 QSSFNPSNGFDSVAEVLVESPPVAKVQVPDMFCESGPIWQFRKGVEEANKFLPNGKNLLL 315
           QSS++  N   +  + LV+SP  + VQ+PD   ES  IWQFRKGVEEA+KFLP+G  L +
Sbjct: 6   QSSYSSLNSVITSVDGLVDSPS-STVQLPDWNDESQSIWQFRKGVEEASKFLPSGNELFV 64

Query: 316 NLESNAFFNNERRKEEAGDILVKLEKKDERETS-PNGSRGKKNVHREEIDVEEGRSYKQS 492
           N+E N   + +  K    ++ VK+EK D+ E   PNGSRG+KN +REE D+EE RS KQ+
Sbjct: 65  NMEMNRLLSQDS-KGGTTEVAVKVEKNDQVEDCLPNGSRGRKNPYREEEDLEEERSSKQA 123

Query: 493 AVFSEETIRNSMLDMVLLC 549
           A+F E T+R+ M D VLLC
Sbjct: 124 AIFQESTVRSEMFDNVLLC 142


>ref|XP_002533752.1| transcription factor, putative [Ricinus communis]
           gi|223526340|gb|EEF28639.1| transcription factor,
           putative [Ricinus communis]
          Length = 815

 Score =  122 bits (305), Expect = 6e-26
 Identities = 71/175 (40%), Positives = 112/175 (64%), Gaps = 4/175 (2%)
 Frame = +1

Query: 43  VEINWIGEHGEYRSLFDTQSIPSDYTFQASPQSSF----NPSNGFDSVAEVLVESPPVAK 210
           V+  W+ +  E   +    S P+DY F+++  S+     NPSN   ++ + ++ S P   
Sbjct: 220 VDPQWVFDVEESNPVLLQTSFPNDYNFKSNSHSTSHFLANPSNCLPNIGDGIMGSSPSEM 279

Query: 211 VQVPDMFCESGPIWQFRKGVEEANKFLPNGKNLLLNLESNAFFNNERRKEEAGDILVKLE 390
           VQ  +MF ++  + QF++G+EEA+KFLP    L+++LESN+F N +  KEEA  +LV  E
Sbjct: 280 VQ--NMFSDTDSVLQFKRGLEEASKFLPRASQLVIDLESNSFANGQ--KEEA-PVLVMKE 334

Query: 391 KKDERETSPNGSRGKKNVHREEIDVEEGRSYKQSAVFSEETIRNSMLDMVLLCKG 555
           +K +R +SP+ SRG+KN +RE+ D+E+GRS KQSAV+ EE+  + + D VLL  G
Sbjct: 335 EKAKRPSSPDESRGRKNHNREDSDLEQGRSSKQSAVYVEESEISEVFDKVLLWPG 389


>ref|XP_002299866.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222847124|gb|EEE84671.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 716

 Score =  120 bits (301), Expect = 2e-25
 Identities = 75/177 (42%), Positives = 108/177 (61%), Gaps = 5/177 (2%)
 Frame = +1

Query: 40  AVEINWIG-EHGEYRSLFDTQSIPSDY----TFQASPQSSFNPSNGFDSVAEVLVESPPV 204
           A E  W+G + G     F    +P D      FQ + Q + NPSNGF    + L+ S   
Sbjct: 123 AKETQWVGGDVGGMNPSFSRTPLPDDNHLHSNFQPNVQFTGNPSNGFTDTGDGLMGSSAG 182

Query: 205 AKVQVPDMFCESGPIWQFRKGVEEANKFLPNGKNLLLNLESNAFFNNERRKEEAGDILVK 384
             VQ  +MF ++  + QF++G+EEA+KFLP    L+++LE+NA   + R+KE+A  ++VK
Sbjct: 183 EMVQ--NMFSDAESVLQFKRGLEEASKFLPIASQLVIDLETNAV--SSRQKEDAPIVVVK 238

Query: 385 LEKKDERETSPNGSRGKKNVHREEIDVEEGRSYKQSAVFSEETIRNSMLDMVLLCKG 555
            E+  ER++SP+GSRG+KN  RE+ D+EEGR  KQSAV  EE+  + M D VLL  G
Sbjct: 239 -EENSERDSSPDGSRGRKNHEREDPDLEEGRRNKQSAVHVEESELSEMFDKVLLWTG 294


Top