BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00001988
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_943688.1| ribosomal protein S12 [Chara vulgaris] gi|38515...    94   3e-27
sp|Q01607.1|RT12_OENEH RecName: Full=40S ribosomal protein S12, ...    88   4e-27
ref|YP_004927625.1| ribosomal protein S12 (mitochondrion) [Anomo...    93   4e-27
ref|YP_539020.1| ribosomal protein S12 [Physcomitrella patens] g...    93   4e-27
gb|AEB39997.1| ribosomal protein S12 [Funaria hygrometrica]            93   5e-27

>ref|NP_943688.1| ribosomal protein S12 [Chara vulgaris]
           gi|385153421|ref|YP_006073024.1| rps12 gene product
           (mitochondrion) [Nitella hyalina]
           gi|32966609|gb|AAP92192.1| ribosomal protein S12 [Chara
           vulgaris] gi|335354152|gb|AEH42839.1| ribosomal protein
           S12 (mitochondrion) [Nitella hyalina]
          Length = 126

 Score = 94.4 bits (233), Expect(2) = 3e-27
 Identities = 45/78 (57%), Positives = 54/78 (69%)
 Frame = -2

Query: 491 NSGKRKIARVRLSNGKDVTCLIPGEGHNLQEHSXXXXXXXXXXXXXXVNYHCIRGTRDLQ 312
           NS  RKIA+VRL+N  +V   IPGEGHNLQEHS              V YHCIRG +DLQ
Sbjct: 46  NSALRKIAKVRLTNRNEVIAYIPGEGHNLQEHSIVMVRGGRVKDLPGVKYHCIRGVKDLQ 105

Query: 311 GVSDRKRGRSQYGTKKPR 258
           G+ +R+RGRS+YGTKKP+
Sbjct: 106 GIPNRRRGRSKYGTKKPK 123



 Score = 54.7 bits (130), Expect(2) = 3e-27
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = -1

Query: 708 TVSQLIRHGRAKKQHKAQGRRLSNCPQKQGVCLKVQVTMPKK 583
           T++QLIRHGR  K+   + R L+ CPQKQGVCL+V    PKK
Sbjct: 3   TMNQLIRHGRESKRRTQRTRALNQCPQKQGVCLRVSTRTPKK 44


>sp|Q01607.1|RT12_OENEH RecName: Full=40S ribosomal protein S12, mitochondrial; Flags:
           Precursor gi|20064|emb|CAA48176.1| ribosomal protein S12
           [Oenothera elata subsp. hookeri]
          Length = 188

 Score = 88.2 bits (217), Expect(2) = 4e-27
 Identities = 43/78 (55%), Positives = 51/78 (65%)
 Frame = -2

Query: 491 NSGKRKIARVRLSNGKDVTCLIPGEGHNLQEHSXXXXXXXXXXXXXXVNYHCIRGTRDLQ 312
           NS   KIA+VRLSN  DV   IPGEGHNLQEHS              V +HCIRG +DL 
Sbjct: 109 NSALGKIAKVRLSNRNDVFAYIPGEGHNLQEHSMVLVRGGRVKDLPGVKFHCIRGVKDLL 168

Query: 311 GVSDRKRGRSQYGTKKPR 258
           G+ DR+RGRS+YG +KP+
Sbjct: 169 GIPDRRRGRSKYGAEKPK 186



 Score = 60.5 bits (145), Expect(2) = 4e-27
 Identities = 29/54 (53%), Positives = 36/54 (66%)
 Frame = -1

Query: 744 AARRIQRHVCFATVSQLIRHGRAKKQHKAQGRRLSNCPQKQGVCLKVQVTMPKK 583
           AA R+ +   FAT++QLIRHGR +K    + R L  CPQKQGVCL+V    PKK
Sbjct: 54  AAFRLPQSSGFATMNQLIRHGREEKHRSDRKRALGKCPQKQGVCLRVSTRTPKK 107


>ref|YP_004927625.1| ribosomal protein S12 (mitochondrion) [Anomodon rugelii]
           gi|336089482|gb|AEH99672.1| ribosomal protein S12
           [Anomodon rugelii]
          Length = 126

 Score = 93.2 bits (230), Expect(2) = 4e-27
 Identities = 44/78 (56%), Positives = 53/78 (67%)
 Frame = -2

Query: 491 NSGKRKIARVRLSNGKDVTCLIPGEGHNLQEHSXXXXXXXXXXXXXXVNYHCIRGTRDLQ 312
           NS  RKIA+VRL+N  ++   IPGEGHNLQEHS              V YHCIRG +DLQ
Sbjct: 46  NSALRKIAKVRLTNRNEIIAYIPGEGHNLQEHSVVMVRGGRAKDLPGVKYHCIRGIKDLQ 105

Query: 311 GVSDRKRGRSQYGTKKPR 258
           G+  R+RGRS+YGTKKP+
Sbjct: 106 GIPSRRRGRSKYGTKKPK 123



 Score = 55.5 bits (132), Expect(2) = 4e-27
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = -1

Query: 708 TVSQLIRHGRAKKQHKAQGRRLSNCPQKQGVCLKVQVTMPKK 583
           T++QLIRHGR  K+   + R L+ CPQKQGVCL+V    PKK
Sbjct: 3   TINQLIRHGRKSKRRTQRTRALTQCPQKQGVCLRVSTRTPKK 44


>ref|YP_539020.1| ribosomal protein S12 [Physcomitrella patens]
           gi|90991399|dbj|BAE93091.1| ribosomal protein S12
           (mitochondrion) [Physcomitrella patens]
          Length = 126

 Score = 93.2 bits (230), Expect(2) = 4e-27
 Identities = 44/78 (56%), Positives = 53/78 (67%)
 Frame = -2

Query: 491 NSGKRKIARVRLSNGKDVTCLIPGEGHNLQEHSXXXXXXXXXXXXXXVNYHCIRGTRDLQ 312
           NS  RKIA+VRL+N  ++   IPGEGHNLQEHS              V YHCIRG +DLQ
Sbjct: 46  NSALRKIAKVRLTNRNEIIAYIPGEGHNLQEHSVVMVRGGRAKDLPGVKYHCIRGVKDLQ 105

Query: 311 GVSDRKRGRSQYGTKKPR 258
           G+  R+RGRS+YGTKKP+
Sbjct: 106 GIPGRRRGRSKYGTKKPK 123



 Score = 55.5 bits (132), Expect(2) = 4e-27
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = -1

Query: 708 TVSQLIRHGRAKKQHKAQGRRLSNCPQKQGVCLKVQVTMPKK 583
           T++QLIRHGR  K+   + R L+ CPQKQGVCL+V    PKK
Sbjct: 3   TINQLIRHGRKSKRRTQRTRALTQCPQKQGVCLRVSTRTPKK 44


>gb|AEB39997.1| ribosomal protein S12 [Funaria hygrometrica]
          Length = 126

 Score = 93.2 bits (230), Expect(2) = 5e-27
 Identities = 44/78 (56%), Positives = 53/78 (67%)
 Frame = -2

Query: 491 NSGKRKIARVRLSNGKDVTCLIPGEGHNLQEHSXXXXXXXXXXXXXXVNYHCIRGTRDLQ 312
           NS  RKIA+VRL+N  ++   IPGEGHNLQEHS              V YHCIRG +DLQ
Sbjct: 46  NSALRKIAKVRLTNRNEIIAYIPGEGHNLQEHSVVMVRGGRAKDLPGVKYHCIRGVKDLQ 105

Query: 311 GVSDRKRGRSQYGTKKPR 258
           G+  R+RGRS+YGTKKP+
Sbjct: 106 GIPGRRRGRSKYGTKKPK 123



 Score = 55.1 bits (131), Expect(2) = 5e-27
 Identities = 24/42 (57%), Positives = 30/42 (71%)
 Frame = -1

Query: 708 TVSQLIRHGRAKKQHKAQGRRLSNCPQKQGVCLKVQVTMPKK 583
           T++QLIRHGR  K+   + R L+ CPQKQGVCL+V    PKK
Sbjct: 3   TINQLIRHGRNSKRRTQRTRALTQCPQKQGVCLRVSTRTPKK 44