BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00001628
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 190...   127   7e-28
ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidops...   127   7e-28
gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis t...   127   7e-28
gb|ABU45195.1| unknown [Petunia integrifolia subsp. inflata]          127   1e-27
ref|NP_564764.1| RNA recognition motif-containing protein [Arabi...   126   2e-27

>gb|AAG51641.1|AC018908_7 putative U2 snRNP auxiliary factor; 19096-22891 [Arabidopsis
           thaliana]
          Length = 568

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/88 (64%), Positives = 72/88 (81%)
 Frame = -2

Query: 464 LRDDGEYEEILEDMKDEGGKFGSLVSIIIPRPNANDEQTPGVGKVFLEYVDTTSSAKAKL 285
           LRDD EY EI+EDM+ EGGKFG+LV+++IPRPN + + TPGVGKVFLEY D   S+KA+ 
Sbjct: 480 LRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARS 539

Query: 284 ALDGRKFGGNEVKAVYYPVDKFSVGHYE 201
            ++GRKFGGN+V AVYYP DK++ G YE
Sbjct: 540 GMNGRKFGGNQVVAVYYPEDKYAQGDYE 567


>ref|NP_176287.3| Splicing factor U2af large subunit B [Arabidopsis thaliana]
           gi|209572798|sp|Q8L716.2|U2A2B_ARATH RecName:
           Full=Splicing factor U2af large subunit B; AltName:
           Full=U2 auxiliary factor 65 kDa subunit B; AltName:
           Full=U2 small nuclear ribonucleoprotein auxiliary factor
           large subunit B; Short=U2 snRNP auxiliary factor large
           subunit B gi|332195625|gb|AEE33746.1| Splicing factor
           U2af large subunit B [Arabidopsis thaliana]
          Length = 589

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/88 (64%), Positives = 72/88 (81%)
 Frame = -2

Query: 464 LRDDGEYEEILEDMKDEGGKFGSLVSIIIPRPNANDEQTPGVGKVFLEYVDTTSSAKAKL 285
           LRDD EY EI+EDM+ EGGKFG+LV+++IPRPN + + TPGVGKVFLEY D   S+KA+ 
Sbjct: 501 LRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARS 560

Query: 284 ALDGRKFGGNEVKAVYYPVDKFSVGHYE 201
            ++GRKFGGN+V AVYYP DK++ G YE
Sbjct: 561 GMNGRKFGGNQVVAVYYPEDKYAQGDYE 588


>gb|AAM98156.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
          Length = 589

 Score =  127 bits (320), Expect = 7e-28
 Identities = 57/88 (64%), Positives = 72/88 (81%)
 Frame = -2

Query: 464 LRDDGEYEEILEDMKDEGGKFGSLVSIIIPRPNANDEQTPGVGKVFLEYVDTTSSAKAKL 285
           LRDD EY EI+EDM+ EGGKFG+LV+++IPRPN + + TPGVGKVFLEY D   S+KA+ 
Sbjct: 501 LRDDEEYAEIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARS 560

Query: 284 ALDGRKFGGNEVKAVYYPVDKFSVGHYE 201
            ++GRKFGGN+V AVYYP DK++ G YE
Sbjct: 561 GMNGRKFGGNQVVAVYYPEDKYAQGDYE 588


>gb|ABU45195.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 506

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/89 (66%), Positives = 74/89 (83%)
 Frame = -2

Query: 464 LRDDGEYEEILEDMKDEGGKFGSLVSIIIPRPNANDEQTPGVGKVFLEYVDTTSSAKAKL 285
           L DD +Y++ILEDM+ E GKFG+L+++IIPRPN N E TPGVGKVFLEY D  SS+KA+ 
Sbjct: 417 LNDDDDYQDILEDMRTECGKFGALLNVIIPRPNPNGEPTPGVGKVFLEYADVDSSSKAQQ 476

Query: 284 ALDGRKFGGNEVKAVYYPVDKFSVGHYEA 198
            L+GRKFGGN+V AV+YP +KFS G+YEA
Sbjct: 477 GLNGRKFGGNQVIAVFYPENKFSEGNYEA 505


>ref|NP_564764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|12323801|gb|AAG51869.1|AC079675_4 U2 snRNP auxiliary
           factor, large subunit, putative; 15147-15692
           [Arabidopsis thaliana] gi|332195616|gb|AEE33737.1| RNA
           recognition motif-containing protein [Arabidopsis
           thaliana]
          Length = 111

 Score =  126 bits (317), Expect = 2e-27
 Identities = 56/88 (63%), Positives = 71/88 (80%)
 Frame = -2

Query: 464 LRDDGEYEEILEDMKDEGGKFGSLVSIIIPRPNANDEQTPGVGKVFLEYVDTTSSAKAKL 285
           LRDD EY +I+EDM  EGGKFG+LV+++IPRPN + + TPGVGKVFLEY D   S+KA+ 
Sbjct: 23  LRDDAEYADIMEDMSQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGSSKARS 82

Query: 284 ALDGRKFGGNEVKAVYYPVDKFSVGHYE 201
            ++GRKFGGN+V AVYYP DK++ G YE
Sbjct: 83  GMNGRKFGGNQVVAVYYPEDKYAQGDYE 110