BLASTX nr result
ID: Panax25_contig00046703
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00046703
(625 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017237841.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 is... 71 3e-17
XP_017237842.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 is... 71 3e-17
KVH96507.1 G-protein beta WD-40 repeat-containing protein [Cynar... 74 3e-13
XP_016568776.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [C... 63 5e-10
XP_009796052.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [N... 64 9e-10
XP_019229675.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [N... 61 7e-09
XP_019152308.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [I... 53 3e-08
OIT06373.1 protein root initiation defective 3 [Nicotiana attenu... 59 5e-08
OAY22940.1 hypothetical protein MANES_18G038500 [Manihot esculenta] 58 7e-08
XP_016449551.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3-li... 57 1e-06
XP_011083877.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [S... 58 2e-06
XP_006354869.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [S... 52 5e-06
XP_009595523.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [N... 55 6e-06
XP_004238145.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [S... 51 6e-06
>XP_017237841.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 isoform X1 [Daucus
carota subsp. sativus] KZN03072.1 hypothetical protein
DCAR_011828 [Daucus carota subsp. sativus]
Length = 449
Score = 71.2 bits (173), Expect(2) = 3e-17
Identities = 32/50 (64%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Frame = +1
Query: 376 HSADPINNILVIKQPPCLYPRTSVNSQASSVRRHGPLL-PPLEKYTNSTD 522
H+ P+NN+L+I++PP LYPRTS++SQ+ S+RR G L+ PPLEKYTNSTD
Sbjct: 308 HAKGPVNNLLIIRRPPSLYPRTSLHSQSPSLRRPGALVPPPLEKYTNSTD 357
Score = 44.7 bits (104), Expect(2) = 3e-17
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 525 NLDVKAVIIPQAYPYKPFNASYVIIYAMNSQI 620
N DVKAVIIPQA PF+ASY+ Y MNSQI
Sbjct: 359 NADVKAVIIPQAESEIPFHASYISTYTMNSQI 390
>XP_017237842.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 isoform X2 [Daucus
carota subsp. sativus]
Length = 447
Score = 71.2 bits (173), Expect(2) = 3e-17
Identities = 32/50 (64%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Frame = +1
Query: 376 HSADPINNILVIKQPPCLYPRTSVNSQASSVRRHGPLL-PPLEKYTNSTD 522
H+ P+NN+L+I++PP LYPRTS++SQ+ S+RR G L+ PPLEKYTNSTD
Sbjct: 308 HAKGPVNNLLIIRRPPSLYPRTSLHSQSPSLRRPGALVPPPLEKYTNSTD 357
Score = 44.7 bits (104), Expect(2) = 3e-17
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 525 NLDVKAVIIPQAYPYKPFNASYVIIYAMNSQI 620
N DVKAVIIPQA PF+ASY+ Y MNSQI
Sbjct: 359 NADVKAVIIPQAESEIPFHASYISTYTMNSQI 390
>KVH96507.1 G-protein beta WD-40 repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 451
Score = 73.6 bits (179), Expect(2) = 3e-13
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = +1
Query: 376 HSADPINNILVIKQPPCLYPRTSVNSQASSVRRHGPLLPPLEKYTN 513
H+ P+NN+LVI+QPP LYPRTS N+QAS RRH PL PPLEKYT+
Sbjct: 309 HAKGPVNNVLVIRQPPALYPRTSANNQASVARRHVPLPPPLEKYTS 354
Score = 29.3 bits (64), Expect(2) = 3e-13
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 522 QNLDVKAVIIPQAYPYKPFNASYVIIYAMNSQIN 623
++ D+ A I PQ K ++A+Y ++MN+QIN
Sbjct: 357 EHSDLNAFITPQPNCDKLYDATYTTFHSMNNQIN 390
>XP_016568776.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Capsicum annuum]
Length = 452
Score = 63.2 bits (152), Expect(2) = 5e-10
Identities = 31/51 (60%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +1
Query: 376 HSADPINNILVIKQPPCLYPRTSVNSQASSVRRHG-PLLPPLEKYTNSTDK 525
H+ P+NNI+V++Q L R SVNSQ SSV+RHG L PPLEKY NSTD+
Sbjct: 314 HAKGPVNNIVVVRQQSLLSSRGSVNSQVSSVKRHGVSLAPPLEKYANSTDE 364
Score = 28.5 bits (62), Expect(2) = 5e-10
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 531 DVKAVIIPQAYPYKPFNASYVIIYAMNSQI 620
D KAVI P+ P + ASY+ I +N+QI
Sbjct: 366 DYKAVIGPRNDPDRAVEASYISIQTLNNQI 395
>XP_009796052.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Nicotiana
sylvestris] XP_016499285.1 PREDICTED: protein ROOT
INITIATION DEFECTIVE 3-like [Nicotiana tabacum]
Length = 449
Score = 64.3 bits (155), Expect(2) = 9e-10
Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +1
Query: 376 HSADPINNILVIKQPPCLYPRTSVNSQASSVRRHG-PLLPPLEKYTNSTD 522
H+ P+NNI+V++QP L PR SVNSQ SV+RHG L PPLEKY NS D
Sbjct: 310 HAKGPVNNIVVVRQPSLLSPRGSVNSQGPSVKRHGVSLPPPLEKYANSAD 359
Score = 26.6 bits (57), Expect(2) = 9e-10
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 531 DVKAVIIPQAYPYKPFNASYVIIYAMNSQI 620
D AVI P+ P + ASY+ + +N+QI
Sbjct: 362 DYVAVIGPRVNPDRSVEASYISVQTLNNQI 391
>XP_019229675.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Nicotiana
attenuata]
Length = 449
Score = 61.2 bits (147), Expect(2) = 7e-09
Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +1
Query: 376 HSADPINNILVIKQPPCLYPRTSVNSQASSVRRHG-PLLPPLEKYTNSTD 522
H+ P+NNI+V++QP L R SVNSQ SV+RHG L PPLEKY NS D
Sbjct: 310 HAKGPVNNIVVVRQPSLLSTRGSVNSQGPSVKRHGVSLPPPLEKYANSAD 359
Score = 26.6 bits (57), Expect(2) = 7e-09
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 531 DVKAVIIPQAYPYKPFNASYVIIYAMNSQI 620
D AVI P+ P + ASY+ + +N+QI
Sbjct: 362 DYVAVIGPRVNPDRSVEASYISVQTLNNQI 391
>XP_019152308.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Ipomoea nil]
Length = 455
Score = 53.1 bits (126), Expect(2) = 3e-08
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +1
Query: 376 HSADPINNILVIKQPPCLYPRTSVNSQASSVRRHG-PLLPPLEKYTNSTDK 525
H P+NNILV++ P L RTS+ S SS +R G P+ PPLEKY+ S+D+
Sbjct: 311 HGKGPVNNILVVRPPSHLSARTSITSHPSSTKRPGLPMPPPLEKYSISSDE 361
Score = 32.3 bits (72), Expect(2) = 3e-08
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +3
Query: 522 QNLDVKAVIIPQAYPYKPFNASYVIIYAMNSQI 620
+N DVKA I PQ P ASYV MN+QI
Sbjct: 361 ENNDVKAFIAPQNIPNVHLEASYVSCQTMNNQI 393
>OIT06373.1 protein root initiation defective 3 [Nicotiana attenuata]
Length = 141
Score = 58.5 bits (140), Expect(2) = 5e-08
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Frame = +1
Query: 388 PINNILVIKQPPCLYPRTSVNSQASSVRRHG-PLLPPLEKYTNSTD 522
P+NNI+V++QP L R SVNSQ SV+RHG L PPLEKY NS D
Sbjct: 6 PVNNIVVVRQPSLLSTRGSVNSQGPSVKRHGVSLPPPLEKYANSAD 51
Score = 26.6 bits (57), Expect(2) = 5e-08
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 531 DVKAVIIPQAYPYKPFNASYVIIYAMNSQI 620
D AVI P+ P + ASY+ + +N+QI
Sbjct: 54 DYVAVIGPRVNPDRSVEASYISVQTLNNQI 83
>OAY22940.1 hypothetical protein MANES_18G038500 [Manihot esculenta]
Length = 444
Score = 57.8 bits (138), Expect(2) = 7e-08
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +1
Query: 376 HSADPINNILVIKQPPCLYPRTSVNSQASSVRRHGPLLPP-LEKYTNSTDK 525
H+ P+NNI ++++P L PR S N Q+SS RRHG LLPP L+KY N+TDK
Sbjct: 310 HAKGPVNNIQIVRRPLYLNPRVSSNVQSSS-RRHGSLLPPALDKYVNTTDK 359
Score = 26.6 bits (57), Expect(2) = 7e-08
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 522 QNLDVKAVIIPQAYPYKPFNASYVIIYAMNSQI 620
+N + AVI PQ+ P +ASY+ ++SQI
Sbjct: 359 KNTGINAVIRPQSTYDSPLDASYLSCQVIDSQI 391
>XP_016449551.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Nicotiana
tabacum]
Length = 449
Score = 57.4 bits (137), Expect(2) = 1e-06
Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +1
Query: 376 HSADPINNILVIKQPPCLYPRTSVNSQASSVRRHGPLL-PPLEKYTNSTD 522
H+ P+NNI+V++QP L SV+SQ SV+RHG L PPLEKY NS D
Sbjct: 310 HAKGPVNNIVVVRQPSLLSTSGSVSSQVPSVKRHGASLPPPLEKYANSAD 359
Score = 22.7 bits (47), Expect(2) = 1e-06
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 531 DVKAVIIPQAYPYKPFNASYVIIYAMNSQI 620
D AVI P+ + ASY+ + +N+QI
Sbjct: 362 DYMAVIGPRFNHDRSVEASYISVQTLNNQI 391
>XP_011083877.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Sesamum indicum]
XP_011083878.1 PREDICTED: protein ROOT INITIATION
DEFECTIVE 3 [Sesamum indicum] XP_011083879.1 PREDICTED:
protein ROOT INITIATION DEFECTIVE 3 [Sesamum indicum]
Length = 452
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +1
Query: 376 HSADPINNILVIKQPPCLYPRTSVNSQASSVRRHG-PLLPPLEKYTNSTDK 525
H+ P+NN+LVI+QP + PRTS S AS+ RR G L PPLEK+ NS D+
Sbjct: 311 HTKGPVNNVLVIRQPKYINPRTSATSLASAARRQGLTLPPPLEKFANSPDE 361
>XP_006354869.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Solanum tuberosum]
Length = 448
Score = 52.4 bits (124), Expect(2) = 5e-06
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +1
Query: 376 HSADPINNILVIKQPPCLYPRTSVNSQASSVRRHG-PLLPPLEKYTNSTDK 525
H+ PINN++V++Q + R +VNSQ SV+RHG L PPLEK NS D+
Sbjct: 310 HAKGPINNVVVVRQSSLMSNRGTVNSQMPSVKRHGVSLPPPLEKCANSADE 360
Score = 25.8 bits (55), Expect(2) = 5e-06
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 531 DVKAVIIPQAYPYKPFNASYVIIYAMNSQI 620
D KAVI P+ P + SY+ I ++++QI
Sbjct: 362 DYKAVIGPRIDPDRSVETSYISIQSLSNQI 391
>XP_009595523.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Nicotiana
tomentosiformis]
Length = 449
Score = 55.1 bits (131), Expect(2) = 6e-06
Identities = 27/50 (54%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +1
Query: 376 HSADPINNILVIKQPPCLYPRTSVNSQASSVRRHGPLL-PPLEKYTNSTD 522
H+ P+NNI+V++QP L SV+ Q SV+RHG L PPLEKY NS D
Sbjct: 310 HAKGPVNNIVVVRQPSLLSTSGSVSFQVPSVKRHGASLPPPLEKYANSAD 359
Score = 22.7 bits (47), Expect(2) = 6e-06
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 531 DVKAVIIPQAYPYKPFNASYVIIYAMNSQI 620
D AVI P+ + ASY+ + +N+QI
Sbjct: 362 DYMAVIGPRFNHDRSVEASYISVQTLNNQI 391
>XP_004238145.1 PREDICTED: protein ROOT INITIATION DEFECTIVE 3 [Solanum
lycopersicum]
Length = 448
Score = 51.2 bits (121), Expect(2) = 6e-06
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +1
Query: 376 HSADPINNILVIKQPPCLYPRTSVNSQASSVRRHG-PLLPPLEKYTNSTDK 525
H+ PINN++V++Q + R ++NSQ SV+RHG L PPLEK NS D+
Sbjct: 310 HAKGPINNVVVVRQSSLMSNRGTMNSQMPSVKRHGVSLPPPLEKCANSADE 360
Score = 26.6 bits (57), Expect(2) = 6e-06
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 531 DVKAVIIPQAYPYKPFNASYVIIYAMNSQI 620
D KAVI P+ P + ASY+ I ++++QI
Sbjct: 362 DYKAVIGPRIDPDRCVEASYISIQSLSNQI 391