BLASTX nr result

ID: Panax25_contig00036533 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax25_contig00036533
         (358 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017252769.1 PREDICTED: cyclin-A1-1 [Daucus carota subsp. sati...    70   2e-11
KVH99554.1 Cyclin A/B/D/E, partial [Cynara cardunculus var. scol...    60   5e-08

>XP_017252769.1 PREDICTED: cyclin-A1-1 [Daucus carota subsp. sativus] KZM95632.1
           hypothetical protein DCAR_018874 [Daucus carota subsp.
           sativus]
          Length = 477

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = +2

Query: 134 TSSLAKRQAKNLGKAESLLPQMAKKRPALANVTNQRHGSENGSRSSTNL 280
           TSSLAKRQA++ GKA   +P+MAKKRPALANVTNQ+H S+ G RSS N+
Sbjct: 15  TSSLAKRQAESFGKAAVFIPEMAKKRPALANVTNQKHVSQIGPRSSMNM 63


>KVH99554.1 Cyclin A/B/D/E, partial [Cynara cardunculus var. scolymus]
          Length = 512

 Score = 59.7 bits (143), Expect = 5e-08
 Identities = 33/51 (64%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
 Frame = +2

Query: 134 TSSLAKRQAKN--LGKAESLLPQMAKKRPALANVTNQRHGSENGSRSSTNL 280
           TSSLAKRQA    +GK+ +L P MAKKRPALANVTNQR  S N  R+ +NL
Sbjct: 77  TSSLAKRQASENFIGKSTALPPHMAKKRPALANVTNQRPASHNVPRNPSNL 127


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