BLASTX nr result
ID: Panax25_contig00018980
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00018980
(436 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017229043.1 PREDICTED: DNA-directed RNA polymerase II subunit... 152 5e-40
XP_006347043.1 PREDICTED: DNA-directed RNA polymerase II subunit... 149 6e-39
XP_015066015.1 PREDICTED: DNA-directed RNA polymerase II subunit... 148 1e-38
NP_001233889.1 DNA-directed RNA polymerase II subunit RPB2 [Sola... 148 1e-38
BAD44440.1 DNA-directed RNA polymerase II second largest chain [... 135 3e-38
XP_019266160.1 PREDICTED: DNA-directed RNA polymerase II subunit... 146 5e-38
XP_015889960.1 PREDICTED: DNA-directed RNA polymerase II subunit... 146 5e-38
XP_009765275.1 PREDICTED: DNA-directed RNA polymerase II subunit... 146 5e-38
XP_016446527.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 146 5e-38
XP_009605280.1 PREDICTED: DNA-directed RNA polymerase II subunit... 145 1e-37
XP_016499992.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 145 1e-37
CDO99545.1 unnamed protein product [Coffea canephora] 144 3e-37
XP_019162258.1 PREDICTED: DNA-directed RNA polymerase II subunit... 143 8e-37
AAZ08457.1 RNA polymerase II second largest subunit [Rhododendro... 143 8e-37
XP_016558259.1 PREDICTED: DNA-directed RNA polymerase II subunit... 142 2e-36
KZV51965.1 DNA-directed RNA polymerase II subunit [Dorcoceras hy... 142 2e-36
XP_008225092.1 PREDICTED: DNA-directed RNA polymerase II subunit... 140 5e-36
XP_007214559.1 hypothetical protein PRUPE_ppa000425mg [Prunus pe... 140 5e-36
XP_017436374.1 PREDICTED: DNA-directed RNA polymerase II subunit... 140 7e-36
XP_017436372.1 PREDICTED: DNA-directed RNA polymerase II subunit... 140 7e-36
>XP_017229043.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Daucus
carota subsp. sativus] KZN11420.1 hypothetical protein
DCAR_004076 [Daucus carota subsp. sativus]
Length = 1192
Score = 152 bits (384), Expect = 5e-40
Identities = 71/80 (88%), Positives = 78/80 (97%)
Frame = +1
Query: 196 MDLEEEYDPSFNDDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES 375
MD+EEEYDP++N+DE EDITQEDAW+VISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDES
Sbjct: 1 MDMEEEYDPAYNEDEGEDITQEDAWTVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDES 60
Query: 376 ADIEIRPESQHNPGQQSDFA 435
ADIEIRPESQHNPG Q+DFA
Sbjct: 61 ADIEIRPESQHNPGHQNDFA 80
>XP_006347043.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Solanum
tuberosum]
Length = 1191
Score = 149 bits (376), Expect = 6e-39
Identities = 72/81 (88%), Positives = 78/81 (96%), Gaps = 1/81 (1%)
Frame = +1
Query: 196 MDLEEEYDPSFN-DDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 372
MDLE+EY+P +N DD+EE+ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDLEDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 373 SADIEIRPESQHNPGQQSDFA 435
SADIEIRPESQHNPG QSDFA
Sbjct: 61 SADIEIRPESQHNPGHQSDFA 81
>XP_015066015.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Solanum
pennellii]
Length = 1191
Score = 148 bits (374), Expect = 1e-38
Identities = 71/81 (87%), Positives = 78/81 (96%), Gaps = 1/81 (1%)
Frame = +1
Query: 196 MDLEEEYDPSFN-DDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 372
MD+E+EY+P +N DD+EE+ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDMEDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 373 SADIEIRPESQHNPGQQSDFA 435
SADIEIRPESQHNPG QSDFA
Sbjct: 61 SADIEIRPESQHNPGHQSDFA 81
>NP_001233889.1 DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
Q42877.1 RecName: Full=DNA-directed RNA polymerase II
subunit RPB2; Short=RNA polymerase II subunit 2;
Short=RNA polymerase II subunit B2; AltName:
Full=DNA-directed RNA polymerase II 135 kDa polypeptide
AAC49273.1 RNA polymerase II subunit 2 [Solanum
lycopersicum]
Length = 1191
Score = 148 bits (374), Expect = 1e-38
Identities = 71/81 (87%), Positives = 78/81 (96%), Gaps = 1/81 (1%)
Frame = +1
Query: 196 MDLEEEYDPSFN-DDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 372
MD+E+EY+P +N DD+EE+ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDMEDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 373 SADIEIRPESQHNPGQQSDFA 435
SADIEIRPESQHNPG QSDFA
Sbjct: 61 SADIEIRPESQHNPGHQSDFA 81
>BAD44440.1 DNA-directed RNA polymerase II second largest chain [Arabidopsis
thaliana]
Length = 124
Score = 135 bits (339), Expect = 3e-38
Identities = 66/78 (84%), Positives = 71/78 (91%), Gaps = 3/78 (3%)
Frame = +1
Query: 211 EYDPS---FNDDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD 381
EY+P DD++E+ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD
Sbjct: 5 EYEPEPQYVEDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD 64
Query: 382 IEIRPESQHNPGQQSDFA 435
IEIRPESQHNPG QSDFA
Sbjct: 65 IEIRPESQHNPGHQSDFA 82
>XP_019266160.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nicotiana
attenuata] OIT05504.1 dna-directed rna polymerase ii
subunit rpb2 [Nicotiana attenuata]
Length = 1191
Score = 146 bits (369), Expect = 5e-38
Identities = 71/81 (87%), Positives = 77/81 (95%), Gaps = 1/81 (1%)
Frame = +1
Query: 196 MDLEEEYDPSFN-DDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 372
MD+EEEY+ +N DD+EE+ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDMEEEYEQQYNNDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 373 SADIEIRPESQHNPGQQSDFA 435
SADIEIRPESQHNPG QSDFA
Sbjct: 61 SADIEIRPESQHNPGHQSDFA 81
>XP_015889960.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ziziphus
jujuba]
Length = 1191
Score = 146 bits (369), Expect = 5e-38
Identities = 69/80 (86%), Positives = 76/80 (95%)
Frame = +1
Query: 196 MDLEEEYDPSFNDDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES 375
M+ ++EYD +NDD+EE+ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES
Sbjct: 1 MEDDQEYDQQYNDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES 60
Query: 376 ADIEIRPESQHNPGQQSDFA 435
ADIEIRPESQHNPG QSDFA
Sbjct: 61 ADIEIRPESQHNPGHQSDFA 80
>XP_009765275.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Nicotiana sylvestris]
Length = 1191
Score = 146 bits (369), Expect = 5e-38
Identities = 71/81 (87%), Positives = 77/81 (95%), Gaps = 1/81 (1%)
Frame = +1
Query: 196 MDLEEEYDPSFN-DDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 372
MD+EEEY+ +N DD+EE+ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDMEEEYEQQYNNDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 373 SADIEIRPESQHNPGQQSDFA 435
SADIEIRPESQHNPG QSDFA
Sbjct: 61 SADIEIRPESQHNPGHQSDFA 81
>XP_016446527.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB2-like [Nicotiana tabacum]
Length = 1197
Score = 146 bits (369), Expect = 5e-38
Identities = 71/81 (87%), Positives = 77/81 (95%), Gaps = 1/81 (1%)
Frame = +1
Query: 196 MDLEEEYDPSFN-DDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 372
MD+EEEY+ +N DD+EE+ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDMEEEYEQQYNNDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 373 SADIEIRPESQHNPGQQSDFA 435
SADIEIRPESQHNPG QSDFA
Sbjct: 61 SADIEIRPESQHNPGHQSDFA 81
>XP_009605280.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Nicotiana tomentosiformis]
Length = 1191
Score = 145 bits (366), Expect = 1e-37
Identities = 71/81 (87%), Positives = 76/81 (93%), Gaps = 1/81 (1%)
Frame = +1
Query: 196 MDLEEEYDPSFN-DDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 372
MD EEEY+ +N DD+EE+ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDTEEEYEQQYNNDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 373 SADIEIRPESQHNPGQQSDFA 435
SADIEIRPESQHNPG QSDFA
Sbjct: 61 SADIEIRPESQHNPGHQSDFA 81
>XP_016499992.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB2-like [Nicotiana tabacum]
Length = 1193
Score = 145 bits (366), Expect = 1e-37
Identities = 71/81 (87%), Positives = 76/81 (93%), Gaps = 1/81 (1%)
Frame = +1
Query: 196 MDLEEEYDPSFN-DDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 372
MD EEEY+ +N DD+EE+ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDTEEEYEQQYNNDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 373 SADIEIRPESQHNPGQQSDFA 435
SADIEIRPESQHNPG QSDFA
Sbjct: 61 SADIEIRPESQHNPGHQSDFA 81
>CDO99545.1 unnamed protein product [Coffea canephora]
Length = 1193
Score = 144 bits (363), Expect = 3e-37
Identities = 69/80 (86%), Positives = 76/80 (95%)
Frame = +1
Query: 196 MDLEEEYDPSFNDDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES 375
MD+E+EY+ + +DEEE+ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES
Sbjct: 1 MDMEDEYEDNQYNDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES 60
Query: 376 ADIEIRPESQHNPGQQSDFA 435
ADIEIRPESQHNPG QSDFA
Sbjct: 61 ADIEIRPESQHNPGHQSDFA 80
>XP_019162258.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ipomoea
nil]
Length = 1190
Score = 143 bits (360), Expect = 8e-37
Identities = 73/81 (90%), Positives = 76/81 (93%), Gaps = 1/81 (1%)
Frame = +1
Query: 196 MDLEEE-YDPSFNDDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 372
MDLEEE Y+ +NDDEEE ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDLEEEEYEQQYNDDEEE-ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 59
Query: 373 SADIEIRPESQHNPGQQSDFA 435
SADIEIRPESQHNPG QSDFA
Sbjct: 60 SADIEIRPESQHNPGHQSDFA 80
>AAZ08457.1 RNA polymerase II second largest subunit [Rhododendron
macrophyllum]
Length = 1191
Score = 143 bits (360), Expect = 8e-37
Identities = 70/81 (86%), Positives = 76/81 (93%)
Frame = +1
Query: 193 EMDLEEEYDPSFNDDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 372
+ + EEEYDP+ +DEEE+ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 2 DFEEEEEYDPTM-EDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 373 SADIEIRPESQHNPGQQSDFA 435
SADIEIRPESQHNPG QSDFA
Sbjct: 61 SADIEIRPESQHNPGHQSDFA 81
>XP_016558259.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Capsicum
annuum]
Length = 1186
Score = 142 bits (357), Expect = 2e-36
Identities = 72/97 (74%), Positives = 77/97 (79%), Gaps = 17/97 (17%)
Frame = +1
Query: 196 MDLEEEYDPSFN-----------------DDEEEDITQEDAWSVISAYFEEKGLVRQQLD 324
MD+EEEY+P +N DEEE+ITQEDAW+VISAYFEEKGLVRQQLD
Sbjct: 1 MDMEEEYEPQYNVVDVDGDDDVDGDGYGEGDEEEEITQEDAWAVISAYFEEKGLVRQQLD 60
Query: 325 SFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSDFA 435
SFDEFIQNTMQEIVDESADIEIRPESQHNPG QSDFA
Sbjct: 61 SFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFA 97
>KZV51965.1 DNA-directed RNA polymerase II subunit [Dorcoceras hygrometricum]
Length = 1194
Score = 142 bits (357), Expect = 2e-36
Identities = 71/84 (84%), Positives = 78/84 (92%), Gaps = 4/84 (4%)
Frame = +1
Query: 196 MDLEEEY-DPSFNDDEEED---ITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 363
MDLEEEY +P++N++EE+D ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEYYEPAYNEEEEDDDDDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 364 VDESADIEIRPESQHNPGQQSDFA 435
VDESADIEIRPESQHNPG Q DFA
Sbjct: 61 VDESADIEIRPESQHNPGHQPDFA 84
>XP_008225092.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Prunus
mume]
Length = 1192
Score = 140 bits (354), Expect = 5e-36
Identities = 69/81 (85%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +1
Query: 196 MDLEEEYDPS-FNDDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 372
MD E EYD +NDD+E++ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDEEPEYDDQQYNDDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 373 SADIEIRPESQHNPGQQSDFA 435
SADIEIRPESQHNPG Q DFA
Sbjct: 61 SADIEIRPESQHNPGHQPDFA 81
>XP_007214559.1 hypothetical protein PRUPE_ppa000425mg [Prunus persica] ONI10423.1
hypothetical protein PRUPE_4G046700 [Prunus persica]
Length = 1192
Score = 140 bits (354), Expect = 5e-36
Identities = 69/81 (85%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +1
Query: 196 MDLEEEYDPS-FNDDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 372
MD E EYD +NDD+E++ITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE
Sbjct: 1 MDEEPEYDDQQYNDDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDE 60
Query: 373 SADIEIRPESQHNPGQQSDFA 435
SADIEIRPESQHNPG Q DFA
Sbjct: 61 SADIEIRPESQHNPGHQPDFA 81
>XP_017436374.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X3
[Vigna angularis]
Length = 1168
Score = 140 bits (353), Expect = 7e-36
Identities = 72/84 (85%), Positives = 75/84 (89%), Gaps = 4/84 (4%)
Frame = +1
Query: 196 MDLEEE--YDPSF--NDDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 363
MDLEEE YD DD+E+DITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEQEYDQQMMEEDDDEDDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 364 VDESADIEIRPESQHNPGQQSDFA 435
VDESADIEIRPESQHNPG QSDFA
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFA 84
>XP_017436372.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Vigna angularis] XP_017436373.1 PREDICTED: DNA-directed
RNA polymerase II subunit RPB2 isoform X2 [Vigna
angularis]
Length = 1194
Score = 140 bits (353), Expect = 7e-36
Identities = 72/84 (85%), Positives = 75/84 (89%), Gaps = 4/84 (4%)
Frame = +1
Query: 196 MDLEEE--YDPSF--NDDEEEDITQEDAWSVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 363
MDLEEE YD DD+E+DITQEDAW+VISAYFEEKGLVRQQLDSFDEFIQNTMQEI
Sbjct: 1 MDLEEEQEYDQQMMEEDDDEDDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI 60
Query: 364 VDESADIEIRPESQHNPGQQSDFA 435
VDESADIEIRPESQHNPG QSDFA
Sbjct: 61 VDESADIEIRPESQHNPGHQSDFA 84