BLASTX nr result
ID: Panax25_contig00013628
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax25_contig00013628
(833 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006350171.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 114 1e-28
XP_009768956.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 114 2e-28
XP_009600551.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 113 3e-28
XP_004236595.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 113 3e-28
OIT36938.1 glycine-rich rna-binding protein 4, mitochondrial [Ni... 112 7e-28
XP_016552967.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 112 8e-28
XP_009626494.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 112 1e-27
XP_019164166.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 111 2e-27
XP_019263721.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 112 3e-27
XP_002533103.2 PREDICTED: glycine-rich RNA-binding protein 2, mi... 110 6e-27
XP_016475188.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 112 8e-27
XP_018832115.1 PREDICTED: glycine-rich RNA-binding protein 2, mi... 109 1e-26
XP_010650691.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 108 2e-26
CBI24662.3 unnamed protein product, partial [Vitis vinifera] 108 3e-26
XP_011461257.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 108 3e-26
XP_015165403.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 108 3e-26
GAV57889.1 RRM_1 domain-containing protein [Cephalotus follicula... 108 4e-26
XP_004295934.2 PREDICTED: glycine-rich RNA-binding protein 4, mi... 108 5e-26
XP_012064991.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 107 1e-25
XP_016552963.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 106 2e-25
>XP_006350171.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X2 [Solanum tuberosum] XP_006350172.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X2 [Solanum tuberosum] XP_006350173.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X2 [Solanum tuberosum] XP_015165407.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X2 [Solanum tuberosum]
Length = 105
Score = 114 bits (286), Expect = 1e-28
Identities = 54/65 (83%), Positives = 58/65 (89%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
+LK AFEQHGE IEVKVICDH SGKSKGYGFV+ TSE ASKAL+EMDGQLLDGRNIR+
Sbjct: 41 ILKQAFEQHGETIEVKVICDHKSGKSKGYGFVKFTSETAASKALKEMDGQLLDGRNIRIS 100
Query: 182 YAHKG 196
YAHKG
Sbjct: 101 YAHKG 105
>XP_009768956.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X2 [Nicotiana sylvestris] XP_016492459.1
PREDICTED: glycine-rich RNA-binding protein 4,
mitochondrial-like isoform X2 [Nicotiana tabacum]
Length = 105
Score = 114 bits (284), Expect = 2e-28
Identities = 54/64 (84%), Positives = 58/64 (90%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
VLK AFEQHGE+IEVKVICDH SGKSKGYGFV+ TSE ASKAL+EMDGQLLDGRNIR+
Sbjct: 41 VLKQAFEQHGEIIEVKVICDHKSGKSKGYGFVKFTSETAASKALKEMDGQLLDGRNIRIS 100
Query: 182 YAHK 193
YAHK
Sbjct: 101 YAHK 104
>XP_009600551.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X2 [Nicotiana tomentosiformis]
Length = 105
Score = 113 bits (283), Expect = 3e-28
Identities = 54/64 (84%), Positives = 58/64 (90%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
VLK AFEQHGE+IEVKVICDH SGKSKGYGFV+ TSE ASKAL+EMDGQLLDGRNIR+
Sbjct: 41 VLKHAFEQHGEIIEVKVICDHKSGKSKGYGFVKFTSETAASKALKEMDGQLLDGRNIRIS 100
Query: 182 YAHK 193
YAHK
Sbjct: 101 YAHK 104
>XP_004236595.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Solanum lycopersicum] XP_010319175.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial
[Solanum lycopersicum] XP_015071654.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
[Solanum pennellii] XP_015071655.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
[Solanum pennellii] XP_015071656.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
[Solanum pennellii] XP_015071657.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
[Solanum pennellii] XP_015071658.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
[Solanum pennellii] XP_019068877.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial
[Solanum lycopersicum]
Length = 105
Score = 113 bits (283), Expect = 3e-28
Identities = 54/65 (83%), Positives = 58/65 (89%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
VLK AFEQHGE IEVKVICDH SGKSKGYGFV+ TSE ASKAL+EMDGQLLDGRNIR+
Sbjct: 41 VLKQAFEQHGETIEVKVICDHKSGKSKGYGFVKFTSETAASKALKEMDGQLLDGRNIRIS 100
Query: 182 YAHKG 196
+AHKG
Sbjct: 101 FAHKG 105
>OIT36938.1 glycine-rich rna-binding protein 4, mitochondrial [Nicotiana
attenuata]
Length = 100
Score = 112 bits (280), Expect = 7e-28
Identities = 53/64 (82%), Positives = 58/64 (90%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
VLK AFEQHGE+IEVKVICDH SGKSKGYGFV+ +SE ASKAL+EMDGQLLDGRNIR+
Sbjct: 36 VLKQAFEQHGEIIEVKVICDHKSGKSKGYGFVKFSSETAASKALKEMDGQLLDGRNIRIS 95
Query: 182 YAHK 193
YAHK
Sbjct: 96 YAHK 99
>XP_016552967.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X2 [Capsicum annuum] XP_016552968.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X2 [Capsicum annuum]
Length = 105
Score = 112 bits (280), Expect = 8e-28
Identities = 53/64 (82%), Positives = 58/64 (90%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
VLK AFEQHGE+IEVKVICDH SG+SKGYGFV+ TSE ASKAL+EMDGQLLDGRNIR+
Sbjct: 41 VLKQAFEQHGEIIEVKVICDHKSGQSKGYGFVKFTSETAASKALKEMDGQLLDGRNIRIS 100
Query: 182 YAHK 193
YAHK
Sbjct: 101 YAHK 104
>XP_009626494.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Nicotiana tomentosiformis]
Length = 108
Score = 112 bits (279), Expect = 1e-27
Identities = 53/64 (82%), Positives = 57/64 (89%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
VLK AFEQHGE+ EVKVICDH SGKSKGYGFV+ TSE ASKAL+EMDGQLLDGRNIR+
Sbjct: 44 VLKQAFEQHGEITEVKVICDHKSGKSKGYGFVKFTSETAASKALKEMDGQLLDGRNIRIS 103
Query: 182 YAHK 193
YAHK
Sbjct: 104 YAHK 107
>XP_019164166.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X2 [Ipomoea nil]
Length = 108
Score = 111 bits (277), Expect = 2e-27
Identities = 54/65 (83%), Positives = 57/65 (87%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
VLK AFE HGELIEVKVICDH SGKSKGYGFV+ SE ASKAL+EMDGQLLDGR+IRVH
Sbjct: 44 VLKGAFESHGELIEVKVICDHKSGKSKGYGFVKFESETAASKALKEMDGQLLDGRSIRVH 103
Query: 182 YAHKG 196
YA KG
Sbjct: 104 YAQKG 108
>XP_019263721.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Nicotiana attenuata]
Length = 149
Score = 112 bits (280), Expect = 3e-27
Identities = 53/64 (82%), Positives = 58/64 (90%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
VLK AFEQHGE+IEVKVICDH SGKSKGYGFV+ +SE ASKAL+EMDGQLLDGRNIR+
Sbjct: 85 VLKQAFEQHGEIIEVKVICDHKSGKSKGYGFVKFSSETAASKALKEMDGQLLDGRNIRIS 144
Query: 182 YAHK 193
YAHK
Sbjct: 145 YAHK 148
>XP_002533103.2 PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial
[Ricinus communis]
Length = 104
Score = 110 bits (274), Expect = 6e-27
Identities = 51/64 (79%), Positives = 60/64 (93%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
+L+DAF QHGELIEVKVICDHV+GKS+GYGFV+ TSE+ ASKAL+EM+GQLLDGRNIRV
Sbjct: 40 ILRDAFRQHGELIEVKVICDHVNGKSEGYGFVKFTSESAASKALKEMNGQLLDGRNIRVC 99
Query: 182 YAHK 193
YAH+
Sbjct: 100 YAHR 103
>XP_016475188.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Nicotiana tabacum]
Length = 177
Score = 112 bits (279), Expect = 8e-27
Identities = 53/64 (82%), Positives = 57/64 (89%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
VLK AFEQHGE+ EVKVICDH SGKSKGYGFV+ TSE ASKAL+EMDGQLLDGRNIR+
Sbjct: 113 VLKQAFEQHGEITEVKVICDHKSGKSKGYGFVKFTSETAASKALKEMDGQLLDGRNIRIS 172
Query: 182 YAHK 193
YAHK
Sbjct: 173 YAHK 176
>XP_018832115.1 PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
isoform X2 [Juglans regia]
Length = 107
Score = 109 bits (272), Expect = 1e-26
Identities = 51/65 (78%), Positives = 56/65 (86%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
VLKDAF QHGE+IE KVICDHVSG+SKGYGFV+ TSE A+ AL EMDGQ LD RNIRVH
Sbjct: 43 VLKDAFGQHGEIIEAKVICDHVSGRSKGYGFVRFTSETAATTALNEMDGQSLDDRNIRVH 102
Query: 182 YAHKG 196
YAH+G
Sbjct: 103 YAHRG 107
>XP_010650691.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
isoform X2 [Vitis vinifera]
Length = 106
Score = 108 bits (270), Expect = 2e-26
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
+LKDAF Q+GE+IEVKVICDHVSGKSKGYGFVQ TS++ A AL+EMDGQ LDGRNIRV
Sbjct: 42 ILKDAFGQYGEIIEVKVICDHVSGKSKGYGFVQFTSDDDAHIALKEMDGQSLDGRNIRVT 101
Query: 182 YAHKG 196
YAHKG
Sbjct: 102 YAHKG 106
>CBI24662.3 unnamed protein product, partial [Vitis vinifera]
Length = 108
Score = 108 bits (270), Expect = 3e-26
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
+LKDAF Q+GE+IEVKVICDHVSGKSKGYGFVQ TS++ A AL+EMDGQ LDGRNIRV
Sbjct: 44 ILKDAFGQYGEIIEVKVICDHVSGKSKGYGFVQFTSDDDAHIALKEMDGQSLDGRNIRVT 103
Query: 182 YAHKG 196
YAHKG
Sbjct: 104 YAHKG 108
>XP_011461257.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X4 [Fragaria vesca subsp. vesca]
Length = 108
Score = 108 bits (270), Expect = 3e-26
Identities = 51/65 (78%), Positives = 58/65 (89%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
VLKDAF +HGE+IEVKVICDHVSGKSKGYGFV+ TSE AS AL+EMDGQ+LDGR IR+
Sbjct: 44 VLKDAFGKHGEIIEVKVICDHVSGKSKGYGFVKFTSETEASTALKEMDGQVLDGRQIRLE 103
Query: 182 YAHKG 196
+AHKG
Sbjct: 104 FAHKG 108
>XP_015165403.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Solanum tuberosum] XP_015165404.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Solanum tuberosum] XP_015165405.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Solanum tuberosum] XP_015165406.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Solanum tuberosum]
Length = 110
Score = 108 bits (270), Expect = 3e-26
Identities = 54/70 (77%), Positives = 58/70 (82%), Gaps = 5/70 (7%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQ-----LLDGR 166
+LK AFEQHGE IEVKVICDH SGKSKGYGFV+ TSE ASKAL+EMDGQ LLDGR
Sbjct: 41 ILKQAFEQHGETIEVKVICDHKSGKSKGYGFVKFTSETAASKALKEMDGQVSVLVLLDGR 100
Query: 167 NIRVHYAHKG 196
NIR+ YAHKG
Sbjct: 101 NIRISYAHKG 110
>GAV57889.1 RRM_1 domain-containing protein [Cephalotus follicularis]
Length = 108
Score = 108 bits (269), Expect = 4e-26
Identities = 51/65 (78%), Positives = 59/65 (90%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
VLK+AFE+HGE+IEVKVIC HV+GKSKGYGFV+ TSE AS AL+EMDG LL+GRNIRVH
Sbjct: 44 VLKNAFERHGEIIEVKVICHHVTGKSKGYGFVKFTSEVAASTALKEMDGLLLEGRNIRVH 103
Query: 182 YAHKG 196
YAH+G
Sbjct: 104 YAHQG 108
>XP_004295934.2 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X3 [Fragaria vesca subsp. vesca]
Length = 130
Score = 108 bits (270), Expect = 5e-26
Identities = 51/65 (78%), Positives = 58/65 (89%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
VLKDAF +HGE+IEVKVICDHVSGKSKGYGFV+ TSE AS AL+EMDGQ+LDGR IR+
Sbjct: 44 VLKDAFGKHGEIIEVKVICDHVSGKSKGYGFVKFTSETEASTALKEMDGQVLDGRQIRLE 103
Query: 182 YAHKG 196
+AHKG
Sbjct: 104 FAHKG 108
>XP_012064991.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Jatropha curcas] KDP44202.1 hypothetical protein
JCGZ_05669 [Jatropha curcas]
Length = 107
Score = 107 bits (266), Expect = 1e-25
Identities = 50/64 (78%), Positives = 59/64 (92%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQLLDGRNIRVH 181
VLK+AFE+HGE+IEVK+ICDHVSGKSKGYGFVQ + E+ AS AL+EM+GQLLD RNIRV+
Sbjct: 43 VLKNAFEKHGEIIEVKIICDHVSGKSKGYGFVQFSCESAASIALKEMNGQLLDDRNIRVY 102
Query: 182 YAHK 193
YAHK
Sbjct: 103 YAHK 106
>XP_016552963.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Capsicum annuum] XP_016552964.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Capsicum annuum] XP_016552965.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Capsicum annuum] XP_016552966.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
isoform X1 [Capsicum annuum]
Length = 110
Score = 106 bits (264), Expect = 2e-25
Identities = 53/69 (76%), Positives = 58/69 (84%), Gaps = 5/69 (7%)
Frame = +2
Query: 2 VLKDAFEQHGELIEVKVICDHVSGKSKGYGFVQLTSENTASKALEEMDGQ-----LLDGR 166
VLK AFEQHGE+IEVKVICDH SG+SKGYGFV+ TSE ASKAL+EMDGQ LLDGR
Sbjct: 41 VLKQAFEQHGEIIEVKVICDHKSGQSKGYGFVKFTSETAASKALKEMDGQVSVEVLLDGR 100
Query: 167 NIRVHYAHK 193
NIR+ YAHK
Sbjct: 101 NIRISYAHK 109